Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g032750 Solanum pennellii HOM05D004994 ORTHO05D006359 1.0e-75 286.6 134 100.0
Solyc02g088010.3 Solanum lycopersicum HOM05D004994 ORTHO05D006359 1.2e-73 279.6 137 97.1
PGSC0003DMG400001423 Solanum tuberosum HOM05D004994 ORTHO05D006359 1.1e-66 256.5 137 89.1
CAN.G206.156 Capsicum annuum HOM05D004994 ORTHO05D006359 5.3e-61 237.7 137 82.5
Nitab4.5_0002980g0100 Nicotiana tabacum HOM05D004994 ORTHO05D006359 2.7e-49 198.7 135 74.1
Nitab4.5_0000564g0010 Nicotiana tabacum HOM05D004994 ORTHO05D006359 3.8e-43 178.3 125 72.0
Peaxi162Scf00129g00125 Petunia axillaris HOM05D004994 ORTHO05D006359 6.8e-40 167.5 111 72.1
CSS0023109 Camellia sinensis var. sinensis HOM05D004994 ORTHO05D006359 1.1e-29 133.7 141 56.0
CSS0046814 Camellia sinensis var. sinensis HOM05D004994 ORTHO05D006359 1.1e-29 133.7 141 56.0
Dinv33769 Davidia involucrata HOM05D004994 ORTHO05D006359 2.7e-28 129.0 141 51.8
Rhsim08G0070200 Rhododendron simsii HOM05D004994 ORTHO05D006359 1.3e-27 126.7 141 53.9
vmacro18188 Vaccinium macrocarpon HOM05D004994 ORTHO05D006359 7.3e-26 120.9 141 51.1
Hma1.2p1_0409F.1_g146890 Hydrangea macrophylla HOM05D004994 ORTHO05D006359 1.1e-24 117.1 142 50.7
MSTRG.3242 Avicennia marina HOM05D004994 ORTHO05D006359 2.3e-24 115.9 140 49.3
Actinidia17553 Actinidia chinensis HOM05D004994 ORTHO05D006359 4.9e-22 108.2 142 48.6
Actinidia38767 Actinidia chinensis HOM05D004994 ORTHO05D006359 8.3e-22 107.5 138 47.1
Actinidia38785 Actinidia chinensis HOM05D004994 ORTHO05D006359 8.3e-22 107.5 138 47.1
SGA_v2.0_scaffold90G27627 Striga asiatica HOM05D004994 ORTHO05D006359 8.3e-22 107.5 142 45.8
QL02p082399 Quercus lobata HOM05D004994 ORTHO05D006359 9.2e-21 104.0 145 46.2
Lalb_Chr04g0258601 Lupinus albus HOM05D004994 ORTHO05D006359 2.7e-20 102.4 137 43.1
Thecc.04G083400 Theobroma cacao HOM05D004994 ORTHO05D006359 4.6e-20 101.7 145 44.1
HanXRQChr13g0399841 Helianthus annuus HOM05D004994 ORTHO05D006359 1.0e-19 100.5 139 43.2
Manes.02G047000 Manihot esculenta HOM05D004994 ORTHO05D006359 2.3e-19 99.4 147 44.2
TWI60G0928 Tripterygium wilfordii HOM05D004994 ORTHO05D006359 3.0e-19 99.0 145 41.4
GSVIVG01011430001 Vitis vinifera HOM05D004994 ORTHO05D006359 3.0e-19 99.0 145 44.8
Cc07_g03440 Coffea canephora HOM05D004994 ORTHO05D006359 6.6e-19 97.8 135 43.7
COL.COLO4_08441 Corchorus olitorius HOM05D004994 ORTHO05D006359 2.5e-18 95.9 147 42.9
Ciclev10012215m.g Citrus clementina HOM05D004994 ORTHO05D006359 5.6e-18 94.7 140 45.0
Nn3g17257 Nelumbo nucifera HOM05D004994 ORTHO05D006359 5.6e-18 94.7 134 44.0
Cfa007567 Carpinus fangiana HOM05D004994 ORTHO05D006359 7.3e-18 94.4 149 43.6
Potri.004G122100 Populus trichocarpa HOM05D004994 ORTHO05D006359 9.5e-18 94.0 147 42.9
CiPaw.03G025700 Carya illinoinensis HOM05D004994 ORTHO05D006359 1.2e-17 93.6 148 41.9
ECA246G4730 Erigeron canadensis HOM05D004994 ORTHO05D006359 2.1e-17 92.8 129 45.7
SalBow1G0614 Salvia bowleyana HOM05D004994 ORTHO05D006359 3.6e-17 92.0 134 38.8
Glyma.09G237300 Glycine max HOM05D004994 ORTHO05D006359 4.7e-17 91.7 141 43.3
CiPaw.04G016600 Carya illinoinensis HOM05D004994 ORTHO05D006359 1.8e-16 89.7 145 42.1
MD09G1052100 Malus domestica HOM05D004994 ORTHO05D006359 1.8e-16 89.7 151 40.4
SalBow1G7872 Salvia bowleyana HOM05D004994 ORTHO05D006359 1.8e-16 89.7 134 38.1
Oeu027854.1 Olea europaea HOM05D004994 ORTHO05D006359 3.1e-16 89.0 135 43.0
Oeu027852.1 Olea europaea HOM05D004994 ORTHO05D006359 4.0e-16 88.6 135 43.0
Eucgr.J01350 Eucalyptus grandis HOM05D004994 ORTHO05D006359 5.2e-16 88.2 146 40.4
VMungo1383G3357 Vigna mungo HOM05D004994 ORTHO05D006359 5.2e-16 88.2 138 44.2
Duzib187G1623 Durio zibethinus HOM05D004994 ORTHO05D006359 8.9e-16 87.4 132 44.7
HanXRQChr09g0265211 Helianthus annuus HOM05D004994 ORTHO05D006359 1.2e-15 87.0 136 42.6
Sc10g0003560 Simmondsia chinensis HOM05D004994 ORTHO05D006359 1.5e-15 86.7 136 40.4
Prupe.3G266600 Prunus persica HOM05D004994 ORTHO05D006359 5.8e-15 84.7 149 40.9
Gohir.A11G069700 Gossypium hirsutum HOM05D004994 ORTHO05D006359 1.3e-14 83.6 129 45.0
Gorai.007G079100 Gossypium raimondii HOM05D004994 ORTHO05D006359 1.3e-14 83.6 129 45.0
TAR374G0051 Trochodendron aralioides HOM05D004994 ORTHO05D006359 1.3e-14 83.6 138 42.8
Phvul.008G036800 Phaseolus vulgaris HOM05D004994 ORTHO05D006359 1.7e-14 83.2 138 41.3
Hund13212 Selenicereus undatus HOM05D004994 ORTHO05D006359 2.2e-14 82.8 135 40.0
arahy.Tifrunner.gnm1.ann1.87XTYU Arachis hypogaea HOM05D004994 ORTHO05D006359 2.9e-14 82.4 141 36.2
Atru.chr8.179 Acer truncatum HOM05D004994 ORTHO05D006359 3.7e-14 82.0 169 38.5
Duzib147G1333 Durio zibethinus HOM05D004994 ORTHO05D006359 4.9e-14 81.6 126 41.3
Lj1g0010103 Lotus japonicus HOM05D004994 ORTHO05D006359 4.9e-14 81.6 139 40.3
Gohir.A05G367000 Gossypium hirsutum HOM05D004994 ORTHO05D006359 6.4e-14 81.3 127 40.9
Gorai.012G053600 Gossypium raimondii HOM05D004994 ORTHO05D006359 6.4e-14 81.3 127 40.9
Lsat_1_v5_gn_3_100161 Lactuca sativa HOM05D004994 ORTHO05D006359 6.4e-14 81.3 135 40.0
ClCG09G018190 Citrullus lanatus HOM05D004994 ORTHO05D006359 1.1e-13 80.5 149 39.6
Gohir.D04G048100 Gossypium hirsutum HOM05D004994 ORTHO05D006359 1.1e-13 80.5 127 40.9
Lj4A110G78 Lonicera japonica HOM05D004994 ORTHO05D006359 1.4e-13 80.1 125 40.8
Lju41A14T30 Lonicera japonica HOM05D004994 ORTHO05D006359 4.1e-13 78.6 140 41.4
DCAR_011091 Daucus carota HOM05D004994 ORTHO05D006359 2.7e-12 75.9 140 39.3
Psat0s1002g0160 Pisum sativum HOM05D004994 ORTHO05D006359 3.5e-12 75.5 142 38.7
Ca_02909_v3 Cicer arietinum L. HOM05D004994 ORTHO05D006359 6.0e-12 74.7 137 39.4
Duzib264G0898 Durio zibethinus HOM05D004994 ORTHO05D006359 7.8e-12 74.3 131 40.5
MELO3C021990.2 Cucumis melo HOM05D004994 ORTHO05D006359 1.0e-11 73.9 146 37.0
CsaV3_5G038070 Cucumis sativus L. HOM05D004994 ORTHO05D006359 1.0e-11 73.9 148 39.9
RcHm_v2.0_Chr2g0168311 Rosa chinensis HOM05D004994 ORTHO05D006359 1.0e-11 73.9 143 38.5
TPR.G27597 Trifolium pratense HOM05D004994 ORTHO05D006359 1.0e-11 73.9 125 39.2
ECA232G4685 Erigeron canadensis HOM05D004994 ORTHO05D006359 3.9e-11 72.0 120 42.5
FAN05G1406 Fragaria x ananassa HOM05D004994 ORTHO05D006359 5.1e-11 71.6 142 37.3
FvH4_6g48370 Fragaria vesca HOM05D004994 ORTHO05D006359 6.6e-11 71.2 143 38.5
FAN14G4526 Fragaria x ananassa HOM05D004994 ORTHO05D006359 6.6e-11 71.2 143 38.5
Sabra04G0090700 Salix brachista HOM05D004994 ORTHO05D006359 8.6e-11 70.9 126 41.3
MBI02_g15397_MAGBIO Magnolia biondii HOM05D004994 ORTHO05D006359 1.9e-10 69.7 141 34.0
FAN09G3433 Fragaria x ananassa HOM05D004994 ORTHO05D006359 2.5e-10 69.3 142 37.3
FAN14G4158 Fragaria x ananassa HOM05D004994 ORTHO05D006359 3.3e-10 68.9 125 40.0
Medtr7g010920 Medicago truncatula HOM05D004994 ORTHO05D006359 9.6e-10 67.4 133 36.8
CANSAT64G0414 Cannabis sativa HOM05D004994 ORTHO05D006359 1.6e-09 66.6 153 32.0
Glyma.18G260200 Glycine max HOM05D004994 ORTHO05D006359 1.6e-09 66.6 114 39.5
FAN02G2251 Fragaria x ananassa HOM05D004994 ORTHO05D006359 2.8e-09 65.9 142 36.6
Migut.H00929 Erythranthe guttata HOM05D004994 ORTHO05D006359 8.9e-08 60.8 135 34.1
unitig_21.g20929 Utricularia gibba HOM05D004994 ORTHO05D006359 1.2e-07 60.5 141 34.8
Aqoxy3G03411 Aquilegia oxysepala HOM05D004994 ORTHO05D006359 2.6e-07 59.3 112 37.5
THA.LOC104805471 Tarenaya hassleriana HOM05D004994 ORTHO05D006359 5.8e-07 58.2 139 34.5
PGR083G2047 Punica granatum HOM05D004994 ORTHO05D006359 7.6e-07 57.8 121 33.9
Sed0013315 Sechium edule HOM05D004994 ORTHO05D006359 9.9e-07 57.4 136 33.8
TAR629G2463 Trochodendron aralioides HOM05D004994 ORTHO05D006359 9.9e-07 57.4 171 31.6
EL10Ac2g02983 Beta vulgaris HOM05D004994 ORTHO05D006359 1.3e-06 57.0 129 37.2
Haze_14520 Corylus avellana HOM05D000513 ORTHO05D005338 2.2e-06 56.2 122 39.3
PSO478G2065 Papaver somniferum HOM05D004994 ORTHO05D006359 4.9e-06 55.1 115 38.3


User provided reference genes

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