Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g032350 Solanum pennellii HOM05D007273 ORTHO05D009230 2.1e-154 548.9 264 100.0
Solyc02g087600.3 Solanum lycopersicum HOM05D007273 ORTHO05D009230 1.2e-152 543.1 264 98.9
PGSC0003DMG401001308 Solanum tuberosum HOM05D007273 ORTHO05D009230 1.9e-150 535.8 264 97.7
CAN.G417.4 Capsicum annuum HOM05D007273 ORTHO05D009230 5.8e-128 461.1 264 85.2
Nitab4.5_0000082g0140 Nicotiana tabacum HOM05D007273 ORTHO05D009230 1.6e-125 453.0 263 83.7
Peaxi162Scf00002g02715 Petunia axillaris HOM05D007273 ORTHO05D009230 7.7e-120 434.1 248 84.3
Nitab4.5_0010316g0010 Nicotiana tabacum HOM05D007273 ORTHO05D009230 1.6e-104 383.3 252 75.4
Dinv12487 Davidia involucrata HOM05D007273 ORTHO05D009230 1.5e-91 340.1 233 67.4
Cc06_g17580 Coffea canephora HOM05D007273 ORTHO05D009230 7.7e-88 327.8 256 62.9
Actinidia39224 Actinidia chinensis HOM05D007273 ORTHO05D009230 1.3e-87 327.0 231 65.8
Rhsim03G0024900 Rhododendron simsii HOM05D007273 ORTHO05D009230 1.9e-86 323.2 234 65.8
Lsat_1_v5_gn_9_29100 Lactuca sativa HOM05D007273 ORTHO05D009230 2.1e-85 319.7 243 63.0
ECA247G0394 Erigeron canadensis HOM05D007273 ORTHO05D009230 3.6e-85 318.9 240 65.0
MSTRG.6428 Avicennia marina HOM05D007273 ORTHO05D009230 5.2e-84 315.1 239 62.3
Nn2g15217 Nelumbo nucifera HOM05D007273 ORTHO05D009230 6.8e-84 314.7 238 64.7
vmacro07848 Vaccinium macrocarpon HOM05D007273 ORTHO05D009230 2.0e-83 313.2 243 60.5
Oeu017941.1 Olea europaea HOM05D007273 ORTHO05D009230 3.7e-82 308.9 250 60.0
SalBow6G5536 Salvia bowleyana HOM05D007273 ORTHO05D009230 4.1e-81 305.4 235 61.3
TAR369G0984 Trochodendron aralioides HOM05D007273 ORTHO05D009230 2.3e-79 299.7 241 60.2
HanXRQChr05g0128781 Helianthus annuus HOM05D007273 ORTHO05D009230 1.5e-78 297.0 232 61.2
DCAR_003245 Daucus carota HOM05D007273 ORTHO05D009230 6.1e-77 291.6 231 61.0
Migut.J01756 Erythranthe guttata HOM05D007273 ORTHO05D009230 6.1e-77 291.6 224 62.5
Sc25g0005300 Simmondsia chinensis HOM05D007273 ORTHO05D009230 6.1e-77 291.6 243 58.0
SGA_v2.0_scaffold69G23119 Striga asiatica HOM05D007273 ORTHO05D009230 1.8e-76 290.0 231 60.2
Aqoxy1G00330 Aquilegia oxysepala HOM05D007273 ORTHO05D009230 8.9e-76 287.7 231 61.0
AUR62024452 Chenopodium quinoa HOM05D007273 ORTHO05D009230 1.5e-75 287.0 231 62.3
EL10Ac3g07092 Beta vulgaris HOM05D007273 ORTHO05D009230 3.4e-75 285.8 237 59.9
Rhsim03G0024700 Rhododendron simsii HOM05D007273 ORTHO05D009230 2.2e-74 283.1 271 54.2
AUR62026041 Chenopodium quinoa HOM05D007273 ORTHO05D009230 5.4e-73 278.5 233 60.9
PSO384G4400 Papaver somniferum HOM05D007273 ORTHO05D009230 4.3e-70 268.9 255 53.3
PSO339G1789 Papaver somniferum HOM05D007273 ORTHO05D009230 5.6e-70 268.5 242 54.1
Haze_19853 Corylus avellana HOM05D007273 ORTHO05D009230 3.4e-67 259.2 235 57.4
Lj1g0021019 Lotus japonicus HOM05D007273 ORTHO05D009230 2.9e-66 256.1 239 54.8
Cfa016813 Carpinus fangiana HOM05D007273 ORTHO05D009230 4.9e-66 255.4 235 58.3
CANSAT80G0412 Cannabis sativa HOM05D007273 ORTHO05D009230 1.9e-65 253.4 239 53.6
RcHm_v2.0_Chr3g0482541 Rosa chinensis HOM05D007273 ORTHO05D009230 3.2e-65 252.7 232 55.2
CANSAT80G2704 Cannabis sativa HOM05D007273 ORTHO05D009230 5.4e-65 251.9 232 55.2
CiPaw.09G038500 Carya illinoinensis HOM05D007273 ORTHO05D009230 5.0e-63 245.4 234 55.1
CsaV3_4G011670 Cucumis sativus L. HOM05D007273 ORTHO05D009230 2.5e-62 243.0 241 53.5
VMungo1383G0084 Vigna mungo HOM05D007273 ORTHO05D009230 1.2e-61 240.7 240 53.8
FAN05G2271 Fragaria x ananassa HOM05D007273 ORTHO05D009230 2.1e-61 240.0 241 50.6
Ca_08456_v3 Cicer arietinum L. HOM05D007273 ORTHO05D009230 4.7e-61 238.8 232 54.3
ClCG04G000150 Citrullus lanatus HOM05D007273 ORTHO05D009230 4.7e-61 238.8 229 56.3
Psat3g072760 Pisum sativum HOM05D007273 ORTHO05D009230 4.7e-61 238.8 232 53.4
FvH4_6g23860 Fragaria vesca HOM05D007273 ORTHO05D009230 8.1e-61 238.0 241 49.8
Medtr7g091490 Medicago truncatula HOM05D007273 ORTHO05D009230 8.1e-61 238.0 231 54.1
Prupe.7G059600 Prunus persica HOM05D007273 ORTHO05D009230 2.3e-60 236.5 241 51.0
Lalb_Chr01g0017311 Lupinus albus HOM05D007273 ORTHO05D009230 8.9e-60 234.6 235 54.0
arahy.Tifrunner.gnm1.ann1.J7IQUN Arachis hypogaea HOM05D007273 ORTHO05D009230 4.4e-59 232.3 238 51.7
Eucgr.A02345 Eucalyptus grandis HOM05D007273 ORTHO05D009230 9.8e-59 231.1 245 50.2
Phvul.001G131900 Phaseolus vulgaris HOM05D007273 ORTHO05D009230 1.7e-58 230.3 236 52.1
Glyma.03G136600 Glycine max HOM05D007273 ORTHO05D009230 3.7e-58 229.2 233 52.4
Sed0019353 Sechium edule HOM05D007273 ORTHO05D009230 4.9e-58 228.8 230 53.9
TWI74G1215 Tripterygium wilfordii HOM05D007273 ORTHO05D009230 1.2e-56 224.2 232 47.8
MBI17_g14625_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 2.1e-56 223.4 236 50.8
QL07p000584 Quercus lobata HOM05D007273 ORTHO05D009230 3.5e-56 222.6 235 51.9
C04p02970 Brassica napus HOM05D007273 ORTHO05D009230 1.0e-55 221.1 237 50.6
Carub.0004s2403 Capsella rubella HOM05D007273 ORTHO05D009230 2.5e-54 216.5 244 47.5
Gorai.006G136300 Gossypium raimondii HOM05D007273 ORTHO05D009230 2.5e-54 216.5 231 48.5
THA.LOC104802102 Tarenaya hassleriana HOM05D007273 ORTHO05D009230 2.5e-54 216.5 240 49.2
A05p02510 Brassica napus HOM05D007273 ORTHO05D009230 3.3e-54 216.1 237 49.8
BraA05t19244Z Brassica rapa HOM05D007273 ORTHO05D009230 3.3e-54 216.1 237 49.8
BolC4t21937H Brassica oleracea HOM05D003650 ORTHO05D004213 4.3e-54 215.7 237 48.5
Gohir.D09G118000 Gossypium hirsutum HOM05D007273 ORTHO05D009230 4.3e-54 215.7 231 48.5
PGR004G1947 Punica granatum HOM05D007273 ORTHO05D009230 4.3e-54 215.7 227 50.7
Sabra06G0036200 Salix brachista HOM05D007273 ORTHO05D009230 1.6e-53 213.8 235 47.2
COL.COLO4_28286 Corchorus olitorius HOM05D007273 ORTHO05D009230 3.6e-53 212.6 233 47.6
Manes.09G022200 Manihot esculenta HOM05D007273 ORTHO05D009230 4.7e-53 212.2 230 49.1
Aa31LG1G23760 Aethionema arabicum HOM05D007273 ORTHO05D009230 1.8e-52 210.3 238 48.3
CARHR136850 Cardamine hirsuta HOM05D007273 ORTHO05D009230 2.3e-52 209.9 239 47.7
Cpa.g.sc92.54 Carica papaya HOM05D007273 ORTHO05D009230 3.1e-52 209.5 231 49.4
Thhalv10017127m.g Eutrema salsugineum HOM05D007273 ORTHO05D009230 3.1e-52 209.5 236 47.9
Gohir.A09G121900 Gossypium hirsutum HOM05D007273 ORTHO05D009230 3.1e-52 209.5 231 47.2
AT2G41750 Arabidopsis thaliana HOM05D007273 ORTHO05D009230 4.0e-52 209.1 246 48.4
AL4G40060 Arabidopsis lyrata HOM05D007273 ORTHO05D009230 1.2e-51 207.6 243 46.9
Thecc.05G153100 Theobroma cacao HOM05D007273 ORTHO05D009230 2.0e-51 206.8 230 46.1
SEGI_31103 Sequoiadendron giganteum HOM05D007273 ORTHO05D009230 3.4e-51 206.1 267 43.1
HPP92_016047 Vanilla planifolia HOM05D007273 ORTHO05D009230 4.4e-51 205.7 241 46.5
Ciclev10033324m.g Citrus clementina HOM05D007273 ORTHO05D009230 5.8e-51 205.3 237 46.4
BcaNung02834 Brassica carinata HOM05D007273 ORTHO05D009230 1.7e-50 203.8 235 48.1
Potri.006G051600 Populus trichocarpa HOM05D007273 ORTHO05D009230 8.4e-50 201.4 235 45.5
Sp4g24020 Schrenkiella parvula HOM05D007273 ORTHO05D009230 3.2e-49 199.5 238 46.6
Mapoly0023s0152 Marchantia polymorpha HOM05D007273 ORTHO05D009230 1.9e-46 190.3 289 37.7
Hma1.2p1_1611F.1_g293550 Hydrangea macrophylla HOM05D007273 ORTHO05D009230 4.3e-46 189.1 154 56.5
Pp3c17_17160 Physcomitrium patens HOM05D007273 ORTHO05D009230 1.6e-45 187.2 291 40.2
Os12g0142600 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 1.2e-43 181.0 246 42.7
MBI17_g36895_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 5.8e-43 178.7 164 52.4
Rhsim03G0024400 Rhododendron simsii HOM05D007273 ORTHO05D009230 2.9e-42 176.4 138 63.0
Os11g0145100 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 3.8e-42 176.0 246 42.3
Rhsim03G0024300 Rhododendron simsii HOM05D007273 ORTHO05D009230 4.2e-41 172.6 138 60.9
Zm00001eb163370 Zea mays HOM05D007273 ORTHO05D009230 4.0e-36 156.0 239 40.6
Ah.04g151620 Amaranthus hybridus HOM05D007273 ORTHO05D009230 2.0e-35 153.7 238 39.9
ATR0626G250 Amborella trichopoda HOM05D007273 ORTHO05D009230 3.4e-35 152.9 358 29.9
SMO240G0020 Selaginella moellendorffii HOM05D007273 ORTHO05D009230 2.9e-34 149.8 220 44.5
FAN09G1358 Fragaria x ananassa HOM05D007273 ORTHO05D009230 6.0e-32 142.1 171 46.8
Lju124C41T6 Lonicera japonica HOM05D007273 ORTHO05D009230 6.0e-32 142.1 96 72.9
unitig_8.g4551 Utricularia gibba HOM05D007273 ORTHO05D009230 5.1e-31 139.0 125 55.2
CSS0001142 Camellia sinensis var. sinensis HOM05D007273 ORTHO05D009230 2.1e-29 133.7 99 60.6
FAN02G1642 Fragaria x ananassa HOM05D007273 ORTHO05D009230 7.6e-27 125.2 147 43.5
AagrBONN_evm.TU.Sc2ySwM_228.793 Anthoceros agrestis HOM05D007273 ORTHO05D009230 5.1e-23 112.5 197 36.0
Rhsim03G0023900 Rhododendron simsii HOM05D007273 ORTHO05D009230 1.9e-22 110.5 143 42.0
Glyma.19G139000 Glycine max HOM05D007273 ORTHO05D009230 1.8e-20 104.0 95 54.7
Actinidia09327 Actinidia chinensis HOM05D007273 ORTHO05D009230 9.6e-14 81.6 127 37.0
MCO07G627 Micromonas commoda HOM05D007273 ORTHO05D009230 5.3e-12 75.9 234 25.6
SEGI_36701 Sequoiadendron giganteum HOM05D007003 ORTHO05D008499 2.0e-11 73.9 256 27.3
TPR.G3731 Trifolium pratense HOM05D007273 ORTHO05D009230 1.7e-10 70.9 48 68.8
SMO339G0013 Selaginella moellendorffii HOM05D007003 ORTHO05D008499 1.9e-09 67.4 281 23.8
TWI39G0907 Tripterygium wilfordii HOM05D007003 ORTHO05D008499 6.1e-08 62.4 268 23.5


User provided reference genes

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