Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g032200 Solanum pennellii HOM05D002627 ORTHO05D002823 8.0e-244 846.7 429 100.0
Solyc02g087450.3 Solanum lycopersicum HOM05D002627 ORTHO05D002823 1.2e-231 806.2 429 96.5
PGSC0003DMG400001402 Solanum tuberosum HOM05D002627 ORTHO05D002823 3.6e-212 741.5 429 89.3
CAN.G206.84 Capsicum annuum HOM05D002627 ORTHO05D002823 9.4e-168 594.0 431 74.0
Nitab4.5_0002265g0070 Nicotiana tabacum HOM05D002627 ORTHO05D002823 8.3e-140 501.1 426 66.7
Nitab4.5_0001239g0090 Nicotiana tabacum HOM05D002627 ORTHO05D002823 1.7e-137 493.4 426 66.2
Peaxi162Scf00129g00637 Petunia axillaris HOM05D002627 ORTHO05D002823 4.7e-111 405.6 425 56.5
Dinv33687 Davidia involucrata HOM05D002627 ORTHO05D002823 3.5e-29 133.7 409 32.8
Solyc07g062420.1 Solanum lycopersicum HOM05D002627 ORTHO05D002823 7.7e-29 132.5 97 69.1
Cc07_g02820 Coffea canephora HOM05D002627 ORTHO05D002823 8.3e-23 112.5 413 31.2
CiPaw.04G021400 Carya illinoinensis HOM05D002627 ORTHO05D002823 1.4e-14 85.1 411 28.5
Oeu018663.2 Olea europaea HOM05D002627 ORTHO05D002823 1.9e-14 84.7 391 30.9
CiPaw.03G032500 Carya illinoinensis HOM05D002627 ORTHO05D002823 2.4e-14 84.3 419 27.0
CSS0022026 Camellia sinensis var. sinensis HOM05D002627 ORTHO05D002823 8.6e-12 75.9 435 26.7
Ciclev10011309m.g Citrus clementina HOM05D002627 ORTHO05D002823 7.3e-11 72.8 170 36.5
QL02p079317 Quercus lobata HOM05D002627 ORTHO05D002823 7.3e-11 72.8 432 27.5
Atru.chr8.2472 Acer truncatum HOM05D002627 ORTHO05D002823 1.1e-09 68.9 431 27.1
Haze_14609 Corylus avellana HOM05D001839 ORTHO05D001867 1.1e-09 68.9 423 27.4
TWI56G0357 Tripterygium wilfordii HOM05D002627 ORTHO05D002823 6.8e-09 66.2 480 25.2
CSS0010077 Camellia sinensis var. sinensis HOM05D002627 ORTHO05D002823 8.9e-09 65.9 118 33.1
arahy.Tifrunner.gnm1.ann1.AP0627 Arachis hypogaea HOM05D002627 ORTHO05D002823 2.0e-08 64.7 171 33.3
Dinv13122 Davidia involucrata HOM05D002627 ORTHO05D002823 2.0e-08 64.7 146 33.6
TAR371G0654 Trochodendron aralioides HOM05D002627 ORTHO05D002823 2.0e-08 64.7 136 35.3
Eucgr.J02157 Eucalyptus grandis HOM05D002627 ORTHO05D002823 2.6e-08 64.3 178 31.5
arahy.Tifrunner.gnm1.ann1.N6T05M Arachis hypogaea HOM05D002627 ORTHO05D002823 3.4e-08 63.9 150 34.7
RcHm_v2.0_Chr2g0169731 Rosa chinensis HOM05D002627 ORTHO05D002823 4.4e-08 63.5 456 26.8
TAR374G0258 Trochodendron aralioides HOM05D002627 ORTHO05D002823 5.8e-08 63.2 148 36.5
PSO161G0001 Papaver somniferum HOM05D002627 ORTHO05D002823 2.2e-07 61.2 238 31.9
PSO478G0854 Papaver somniferum HOM05D002627 ORTHO05D002823 2.2e-07 61.2 238 31.9
FAN05G1906 Fragaria x ananassa HOM05D002627 ORTHO05D002823 3.7e-07 60.5 153 36.6
Lalb_Chr13g0298031 Lupinus albus HOM05D002627 ORTHO05D002823 4.9e-07 60.1 145 34.5
FvH4_6g49700 Fragaria vesca HOM05D002627 ORTHO05D002823 8.3e-07 59.3 153 35.9
FAN14G0027 Fragaria x ananassa HOM05D002627 ORTHO05D002823 8.3e-07 59.3 153 35.9
Gorai.003G071800 Gossypium raimondii HOM05D002627 ORTHO05D002823 8.3e-07 59.3 139 34.5
ClCG01G014180 Citrullus lanatus HOM05D002627 ORTHO05D002823 1.1e-06 58.9 93 39.8
Lj4g0005532 Lotus japonicus HOM05D002627 ORTHO05D002823 1.1e-06 58.9 76 46.1
Nn3g17059 Nelumbo nucifera HOM05D002627 ORTHO05D002823 1.1e-06 58.9 147 35.4
Lalb_Chr12g0201291 Lupinus albus HOM05D002627 ORTHO05D002823 1.4e-06 58.5 95 41.1
Thecc.04G069700 Theobroma cacao HOM05D002627 ORTHO05D002823 1.4e-06 58.5 165 33.9
Cpa.g.sc14.65 Carica papaya HOM05D002627 ORTHO05D002823 1.9e-06 58.2 404 26.2
FAN09G0791 Fragaria x ananassa HOM05D002627 ORTHO05D002823 1.9e-06 58.2 153 36.6
MD06G1183100 Malus domestica HOM05D002627 ORTHO05D002823 1.9e-06 58.2 96 41.7
MD14G1189100 Malus domestica HOM05D002627 ORTHO05D002823 1.9e-06 58.2 93 43.0
Sed0010058 Sechium edule HOM05D002627 ORTHO05D002823 1.9e-06 58.2 94 39.4
Gohir.D03G089600 Gossypium hirsutum HOM05D002627 ORTHO05D002823 2.4e-06 57.8 139 34.5
Prupe.5G181800 Prunus persica HOM05D002627 ORTHO05D002823 2.4e-06 57.8 94 40.4
CANSAT80G1418 Cannabis sativa HOM05D002627 ORTHO05D002823 4.1e-06 57.0 71 46.5
CiPaw.11G034000 Carya illinoinensis HOM05D002627 ORTHO05D002823 4.1e-06 57.0 412 25.7
MELO3C002230.2 Cucumis melo HOM05D002627 ORTHO05D002823 4.1e-06 57.0 97 39.2
CsaV3_1G008130 Cucumis sativus L. HOM05D002627 ORTHO05D002823 4.1e-06 57.0 97 39.2
QL10p013948 Quercus lobata HOM05D002627 ORTHO05D002823 4.1e-06 57.0 94 44.7
Gohir.A03G076100 Gossypium hirsutum HOM05D002627 ORTHO05D002823 5.4e-06 56.6 139 33.1
Lj7A404G41 Lonicera japonica HOM05D002627 ORTHO05D002823 5.4e-06 56.6 429 26.3


User provided reference genes

Program Settings