Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g031550 Solanum pennellii HOM05D006084 ORTHO05D007449 6.2e-61 237.3 120 100.0
PGSC0003DMG400000490 Solanum tuberosum HOM05D006084 ORTHO05D007449 1.5e-59 232.6 120 97.5
CAN.G206.22 Capsicum annuum HOM05D006084 ORTHO05D007449 1.6e-56 222.6 120 92.5
TAR371G1194 Trochodendron aralioides HOM05D006084 ORTHO05D007449 6.1e-48 194.1 119 79.8
Dinv33481 Davidia involucrata HOM05D006084 ORTHO05D007449 3.9e-47 191.4 120 76.7
Peaxi162Scf00129g01228 Petunia axillaris HOM05D006084 ORTHO05D007449 3.9e-47 191.4 105 90.5
Aqoxy3G02941 Aquilegia oxysepala HOM05D006084 ORTHO05D007449 1.5e-46 189.5 117 78.6
Prupe.3G286100 Prunus persica HOM05D006084 ORTHO05D007449 3.3e-46 188.3 117 77.8
Manes.17G116000 Manihot esculenta HOM05D006084 ORTHO05D007449 9.7e-46 186.8 119 78.2
PGR142G2538 Punica granatum HOM05D006084 ORTHO05D007449 9.7e-46 186.8 116 77.6
Hma1.2p1_0846F.1_g227700 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 1.3e-45 186.4 117 78.6
CSS0000489 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 4.8e-45 184.5 120 75.8
CSS0035017 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 4.8e-45 184.5 120 75.8
Eucgr.I01785 Eucalyptus grandis HOM05D006084 ORTHO05D007449 4.8e-45 184.5 119 76.5
MD17G1033600 Malus domestica HOM05D006084 ORTHO05D007449 4.8e-45 184.5 117 74.4
Rhsim08G0053800 Rhododendron simsii HOM05D006084 ORTHO05D007449 4.8e-45 184.5 117 76.9
QL02p076043 Quercus lobata HOM05D006084 ORTHO05D007449 6.3e-45 184.1 116 75.9
QL02p076078 Quercus lobata HOM05D006084 ORTHO05D007449 6.3e-45 184.1 116 75.9
Atru.chr6.2220 Acer truncatum HOM05D006084 ORTHO05D007449 8.2e-45 183.7 119 75.6
Cc07_g02120 Coffea canephora HOM05D006084 ORTHO05D007449 3.1e-44 181.8 117 72.6
FvH4_6g50830 Fragaria vesca HOM05D006084 ORTHO05D007449 4.1e-44 181.4 117 74.4
Cfa007418 Carpinus fangiana HOM05D006084 ORTHO05D007449 6.9e-44 180.6 117 75.2
RcHm_v2.0_Chr2g0172221 Rosa chinensis HOM05D006084 ORTHO05D007449 6.9e-44 180.6 117 74.4
GSVIVG01032459001 Vitis vinifera HOM05D006084 ORTHO05D007449 6.9e-44 180.6 117 76.1
CiPaw.03G039200 Carya illinoinensis HOM05D006084 ORTHO05D007449 9.1e-44 180.3 117 73.5
FAN02G2714 Fragaria x ananassa HOM05D006084 ORTHO05D007449 1.2e-43 179.9 117 73.5
FAN14G2625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 1.2e-43 179.9 117 73.5
Haze_14684 Corylus avellana HOM05D006084 ORTHO05D007449 2.0e-43 179.1 116 75.0
PSO210G7688 Papaver somniferum HOM05D006084 ORTHO05D007449 2.6e-43 178.7 117 72.6
Actinidia35746 Actinidia chinensis HOM05D006084 ORTHO05D007449 3.4e-43 178.3 119 73.9
PSO782G1469 Papaver somniferum HOM05D006084 ORTHO05D007449 4.5e-43 177.9 117 73.5
Hund02345 Selenicereus undatus HOM05D006084 ORTHO05D007449 5.9e-43 177.6 117 72.6
Sc03g0007970 Simmondsia chinensis HOM05D006084 ORTHO05D007449 1.0e-42 176.8 117 70.1
Glyma.04G247000 Glycine max HOM05D006084 ORTHO05D007449 2.2e-42 175.6 119 72.3
MELO3C005689.2 Cucumis melo HOM05D006084 ORTHO05D007449 2.9e-42 175.3 117 71.8
FAN05G5625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 3.8e-42 174.9 115 73.0
ATR0730G058 Amborella trichopoda HOM05D006084 ORTHO05D007449 5.0e-42 174.5 120 68.3
Gohir.D07G227900 Gossypium hirsutum HOM05D006084 ORTHO05D007449 5.0e-42 174.5 117 71.8
Potri.001G349500 Populus trichocarpa HOM05D006084 ORTHO05D007449 6.5e-42 174.1 117 72.6
CsaV3_5G027340 Cucumis sativus L. HOM05D006084 ORTHO05D007449 1.1e-41 173.3 117 70.1
Glyma.06G115700 Glycine max HOM05D006084 ORTHO05D007449 1.1e-41 173.3 119 71.4
CDE08G0643 Ceratophyllum demersum HOM05D006084 ORTHO05D007449 1.4e-41 172.9 117 70.1
Gohir.A07G221200 Gossypium hirsutum HOM05D006084 ORTHO05D007449 1.9e-41 172.6 117 70.1
HanXRQChr07g0198791 Helianthus annuus HOM05D006084 ORTHO05D007449 1.9e-41 172.6 117 71.8
PSO566G0352 Papaver somniferum HOM05D006084 ORTHO05D007449 1.9e-41 172.6 116 69.8
ATR1096G027 Amborella trichopoda HOM05D006084 ORTHO05D007449 2.5e-41 172.2 119 67.2
CANSAT64G0964 Cannabis sativa HOM05D006084 ORTHO05D007449 2.5e-41 172.2 117 69.2
Hma1.2p1_0056F.1_g031653 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 3.2e-41 171.8 105 79.0
Sed0018290 Sechium edule HOM05D006084 ORTHO05D007449 3.2e-41 171.8 117 69.2
MSTRG.3166 Avicennia marina HOM05D006084 ORTHO05D007449 4.2e-41 171.4 112 73.2
Lalb_Chr10g0093921 Lupinus albus HOM05D006084 ORTHO05D007449 4.2e-41 171.4 119 69.7
Phvul.009G127800 Phaseolus vulgaris HOM05D006084 ORTHO05D007449 4.2e-41 171.4 119 69.7
Ca_16579_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 7.2e-41 170.6 119 70.6
Thecc.04G011100 Theobroma cacao HOM05D006084 ORTHO05D007449 9.4e-41 170.2 117 72.6
ECA238G3069 Erigeron canadensis HOM05D006084 ORTHO05D007449 1.2e-40 169.9 117 71.8
Medtr3g088470 Medicago truncatula HOM05D006084 ORTHO05D007449 1.6e-40 169.5 119 68.9
Hma1.2p1_1415F.1_g281960 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 2.1e-40 169.1 105 79.0
Migut.H00108 Erythranthe guttata HOM05D006084 ORTHO05D007449 2.7e-40 168.7 112 75.9
TWI12G0619 Tripterygium wilfordii HOM05D006084 ORTHO05D007449 2.7e-40 168.7 117 72.6
COL.COLO4_28991 Corchorus olitorius HOM05D006084 ORTHO05D007449 6.1e-40 167.5 134 66.4
HanXRQChr14g0450361 Helianthus annuus HOM05D006084 ORTHO05D007449 7.9e-40 167.2 117 69.2
TPR.G13476 Trifolium pratense HOM05D006084 ORTHO05D007449 1.0e-39 166.8 119 70.6
Nitab4.5_0007141g0020 Nicotiana tabacum HOM05D006084 ORTHO05D007449 2.3e-39 165.6 107 80.4
FAN09G3162 Fragaria x ananassa HOM05D006084 ORTHO05D007449 3.0e-39 165.2 122 68.0
Lj1g0023236 Lotus japonicus HOM05D006084 ORTHO05D007449 3.0e-39 165.2 120 67.5
A02p02680 Brassica napus HOM05D006084 ORTHO05D007449 5.1e-39 164.5 117 68.4
BraA02t05237Z Brassica rapa HOM05D006084 ORTHO05D007449 5.1e-39 164.5 117 68.4
HPP92_022049 Vanilla planifolia HOM05D006084 ORTHO05D007449 6.7e-39 164.1 117 68.4
EL10Ac3g07214 Beta vulgaris HOM05D006084 ORTHO05D007449 1.1e-38 163.3 113 70.8
BcaB01g05101 Brassica carinata HOM05D006084 ORTHO05D007449 1.5e-38 162.9 117 66.7
C03p07740 Brassica napus HOM05D006084 ORTHO05D007449 1.5e-38 162.9 117 66.7
BolC3t13274H Brassica oleracea HOM05D006084 ORTHO05D007449 1.5e-38 162.9 117 66.7
A03p06720 Brassica napus HOM05D006084 ORTHO05D007449 2.6e-38 162.2 117 66.7
CARHR198600 Cardamine hirsuta HOM05D006084 ORTHO05D007449 2.6e-38 162.2 117 67.5
Thhalv10015025m.g Eutrema salsugineum HOM05D006084 ORTHO05D007449 2.6e-38 162.2 117 67.5
BcaNung03101 Brassica carinata HOM05D006084 ORTHO05D007449 4.4e-38 161.4 117 66.7
Sp6g29330 Schrenkiella parvula HOM05D006084 ORTHO05D007449 4.4e-38 161.4 117 66.7
Solyc02g086780.4 Solanum lycopersicum HOM05D006084 ORTHO05D007449 4.4e-38 161.4 81 100.0
Oeu004718.1 Olea europaea HOM05D006084 ORTHO05D007449 5.7e-38 161.0 112 72.3
Carub.0006s1288 Capsella rubella HOM05D006084 ORTHO05D007449 9.7e-38 160.2 117 65.8
ClCG09G019010 Citrullus lanatus HOM05D006084 ORTHO05D007449 9.7e-38 160.2 139 58.3
AT5G14710 Arabidopsis thaliana HOM05D006084 ORTHO05D007449 1.7e-37 159.5 117 65.8
BraA03t10005Z Brassica rapa HOM05D006084 ORTHO05D007449 1.7e-37 159.5 117 65.8
Aa31LG11G14750 Aethionema arabicum HOM05D006084 ORTHO05D007449 2.2e-37 159.1 117 66.7
arahy.Tifrunner.gnm1.ann1.DMWP0X Arachis hypogaea HOM05D006084 ORTHO05D007449 2.8e-37 158.7 119 67.2
BcaC03g13452 Brassica carinata HOM05D006084 ORTHO05D007449 2.8e-37 158.7 117 65.8
C02p07250 Brassica napus HOM05D006084 ORTHO05D007449 2.8e-37 158.7 117 65.8
BolC2t06657H Brassica oleracea HOM05D006084 ORTHO05D007449 2.8e-37 158.7 117 65.8
Os10g0395500 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 2.8e-37 158.7 119 65.5
unitig_746.g26552 Utricularia gibba HOM05D006084 ORTHO05D007449 2.8e-37 158.7 112 67.9
AL6G25480 Arabidopsis lyrata HOM05D006084 ORTHO05D007449 3.7e-37 158.3 117 65.8
arahy.Tifrunner.gnm1.ann1.2LS7ZQ Arachis hypogaea HOM05D006084 ORTHO05D007449 3.7e-37 158.3 119 67.2
THA.LOC104821076 Tarenaya hassleriana HOM05D006084 ORTHO05D007449 4.8e-37 157.9 117 65.0
arahy.Tifrunner.gnm1.ann1.48HX9C Arachis hypogaea HOM05D006084 ORTHO05D007449 1.4e-36 156.4 119 66.4
BcaC04g19017 Brassica carinata HOM05D006084 ORTHO05D007449 3.1e-36 155.2 110 69.1
ClCG00G003490 Citrullus lanatus HOM05D006084 ORTHO05D007449 3.1e-36 155.2 137 57.7
Zm00001eb048120 Zea mays HOM05D006084 ORTHO05D007449 7.0e-36 154.1 117 65.8
SGA_v2.0_scaffold2848G54225 Striga asiatica HOM05D006084 ORTHO05D007449 2.0e-35 152.5 112 67.9
Nn3g16859 Nelumbo nucifera HOM05D006084 ORTHO05D007449 7.7e-35 150.6 116 68.1
MBI19_g17406_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 1.7e-34 149.4 129 58.9
Gorai.001G262800 Gossypium raimondii HOM05D006084 ORTHO05D007449 2.2e-34 149.1 100 70.0
Mapoly0005s0179 Marchantia polymorpha HOM05D006084 ORTHO05D007449 3.8e-34 148.3 117 61.5
arahy.Tifrunner.gnm1.ann1.GQ5XJ3 Arachis hypogaea HOM05D006084 ORTHO05D007449 2.5e-33 145.6 136 57.4
C09p62430 Brassica napus HOM05D006084 ORTHO05D007449 5.5e-33 144.4 99 69.7
MBI19_g07248_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 5.5e-33 144.4 131 58.0
Nitab4.5_0006281g0070 Nicotiana tabacum HOM05D006084 ORTHO05D007449 1.2e-32 143.3 77 92.2
Lsat_1_v5_gn_2_91880 Lactuca sativa HOM05D006084 ORTHO05D007449 3.6e-32 141.7 117 62.4
SHI16396 Sapria himalayana HOM05D006084 ORTHO05D007449 3.6e-32 141.7 101 65.3
BolC9t59081H Brassica oleracea HOM05D006084 ORTHO05D007449 1.0e-31 140.2 99 68.7
AUR62031990 Chenopodium quinoa HOM05D006084 ORTHO05D007449 5.2e-31 137.9 117 62.4
Pp3c26_1260 Physcomitrium patens HOM05D006084 ORTHO05D007449 5.2e-31 137.9 129 51.2
Sabra16G0228900 Salix brachista HOM05D006084 ORTHO05D007449 6.7e-31 137.5 209 42.1
SMO367G0706 Selaginella moellendorffii HOM05D006084 ORTHO05D007449 7.4e-30 134.0 102 65.7
Cpa.g.c30698.2 Carica papaya HOM05D006084 ORTHO05D007449 1.4e-28 129.8 88 71.6
Duzib264G1216 Durio zibethinus HOM05D006084 ORTHO05D007449 4.5e-27 124.8 81 72.8
DCAR_011237 Daucus carota HOM05D006084 ORTHO05D007449 2.9e-26 122.1 106 63.2
Ciclev10017692m.g Citrus clementina HOM05D006084 ORTHO05D007449 4.2e-25 118.2 68 77.9
CBR_g5628 Chara braunii HOM05D006084 ORTHO05D007449 4.4e-22 108.2 122 45.9
AUR62030334 Chenopodium quinoa HOM05D006084 ORTHO05D007449 2.8e-21 105.5 66 72.7
Ca_03224_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 2.7e-19 99.0 68 67.6
MELO3C033557.2 Cucumis melo HOM05D006084 ORTHO05D007449 2.7e-19 99.0 185 37.3
BraA10t44460Z Brassica rapa HOM05D006084 ORTHO05D007449 1.0e-18 97.1 89 57.3
AagrBONN_evm.TU.Sc2ySwM_228.3157 Anthoceros agrestis HOM05D006084 ORTHO05D007449 8.5e-18 94.0 80 52.5
Cre13.g571000 Chlamydomonas reinhardtii HOM05D006084 ORTHO05D007449 4.2e-17 91.7 116 37.9
Os01g0339600 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 6.1e-16 87.8 70 64.3
arahy.Tifrunner.gnm1.ann1.2H702Y Arachis hypogaea HOM05D006084 ORTHO05D007449 5.2e-15 84.7 61 67.2
Dinv35076 Davidia involucrata HOM05D006084 ORTHO05D007449 5.0e-10 68.2 44 72.7
SEGI_25092 Sequoiadendron giganteum HOM05D006084 ORTHO05D007449 3.3e-09 65.5 48 56.2
MCO07G269 Micromonas commoda HOM05D006084 ORTHO05D007449 3.0e-07 58.9 106 33.0
A10p23960 Brassica napus HOM05D006084 ORTHO05D007449 5.2e-07 58.2 105 37.1


User provided reference genes

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