Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g031520 Solanum pennellii HOM05D005169 ORTHO05D006436 2.3e-109 399.1 224 100.0
Solyc02g086760.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 3.7e-107 391.7 224 98.7
PGSC0003DMG400000520 Solanum tuberosum HOM05D005169 ORTHO05D006436 1.6e-102 376.3 227 92.1
Nitab4.5_0014517g0010 Nicotiana tabacum HOM05D005169 ORTHO05D006436 3.8e-51 205.7 229 62.9
Nitab4.5_0002416g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 1.7e-35 153.7 217 44.2
Peaxi162Scf00129g00124 Petunia axillaris HOM05D005169 ORTHO05D006436 3.2e-34 149.4 192 48.4
Nitab4.5_0002306g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 1.2e-33 147.5 222 44.1
Peaxi162Scf00700g00522 Petunia axillaris HOM05D005169 ORTHO05D006436 4.6e-33 145.6 231 41.1
Lju41C36T6 Lonicera japonica HOM05D005169 ORTHO05D006436 5.6e-31 138.7 218 41.3
Dinv33480 Davidia involucrata HOM05D005169 ORTHO05D006436 1.6e-30 137.1 171 44.4
vmacro05837 Vaccinium macrocarpon HOM05D005169 ORTHO05D006436 1.4e-29 134.0 191 40.8
Dinv35078 Davidia involucrata HOM05D005169 ORTHO05D006436 3.1e-29 132.9 175 45.1
Oeu014861.1 Olea europaea HOM05D005169 ORTHO05D006436 9.0e-29 131.3 181 42.0
Actinidia36094 Actinidia chinensis HOM05D005169 ORTHO05D006436 3.4e-28 129.4 173 44.5
Cc07_g02080 Coffea canephora HOM05D005169 ORTHO05D006436 4.5e-28 129.0 189 41.8
QL02p075994 Quercus lobata HOM05D005169 ORTHO05D006436 4.5e-28 129.0 191 41.9
CSS0037801 Camellia sinensis var. sinensis HOM05D005169 ORTHO05D006436 6.5e-27 125.2 183 39.9
Manes.15G165700 Manihot esculenta HOM05D005169 ORTHO05D006436 8.4e-27 124.8 183 53.0
Thecc.04G011300 Theobroma cacao HOM05D005169 ORTHO05D006436 8.4e-27 124.8 182 52.2
SGA_v2.0_scaffold30G12455 Striga asiatica HOM05D005169 ORTHO05D006436 1.4e-26 124.0 208 43.3
MD17G1033200 Malus domestica HOM05D005169 ORTHO05D006436 2.5e-26 123.2 202 38.1
COL.COLO4_28998 Corchorus olitorius HOM05D005169 ORTHO05D006436 4.2e-26 122.5 186 42.5
Gorai.006G030600 Gossypium raimondii HOM05D005169 ORTHO05D006436 4.2e-26 122.5 173 43.9
Gohir.D09G026600 Gossypium hirsutum HOM05D005169 ORTHO05D006436 9.3e-26 121.3 173 43.4
Gohir.A09G026900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 1.2e-25 120.9 173 43.4
Haze_14687 Corylus avellana HOM05D005169 ORTHO05D006436 1.6e-25 120.6 213 37.1
Rhsim10G0020400 Rhododendron simsii HOM05D005169 ORTHO05D006256 1.6e-25 120.6 213 40.4
Oeu062928.1 Olea europaea HOM05D005169 ORTHO05D006436 2.1e-25 120.2 193 42.0
CiPaw.03G039400 Carya illinoinensis HOM05D005169 ORTHO05D006436 2.7e-25 119.8 172 41.3
TAR622G1423 Trochodendron aralioides HOM05D005169 ORTHO05D006436 3.5e-25 119.4 180 41.7
Atru.chr6.2317 Acer truncatum HOM05D005169 ORTHO05D006256 4.6e-25 119.0 176 39.2
HanXRQChr09g0266101 Helianthus annuus HOM05D005169 ORTHO05D006436 1.0e-24 117.9 194 38.1
Cfa007415 Carpinus fangiana HOM05D005169 ORTHO05D006436 1.3e-24 117.5 222 38.3
Oeu043043.1 Olea europaea HOM05D005169 ORTHO05D006436 6.7e-24 115.2 192 38.0
Potri.001G349700 Populus trichocarpa HOM05D005169 ORTHO05D006436 6.7e-24 115.2 202 36.6
Solyc12g062840.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 6.7e-24 115.2 192 39.6
PSO017G2305 Papaver somniferum HOM05D005169 ORTHO05D006436 1.5e-23 114.0 205 39.0
Migut.K01374 Erythranthe guttata HOM05D005169 ORTHO05D006436 1.9e-23 113.6 172 41.3
Prupe.3G286300 Prunus persica HOM05D005169 ORTHO05D006436 2.5e-23 113.2 224 33.9
Gohir.A11G067000 Gossypium hirsutum HOM05D005169 ORTHO05D006436 4.3e-23 112.5 183 37.7
THA.LOC104821080 Tarenaya hassleriana HOM05D005169 ORTHO05D006436 4.3e-23 112.5 181 38.7
PSO478G0492 Papaver somniferum HOM05D005169 ORTHO05D006436 5.7e-23 112.1 198 44.4
TWI56G0416 Tripterygium wilfordii HOM05D005169 ORTHO05D006436 9.6e-23 111.3 182 41.8
TAR629G1679 Trochodendron aralioides HOM05D005169 ORTHO05D006436 9.6e-23 111.3 170 37.6
Hma1.2p1_0858F.1_g229310 Hydrangea macrophylla HOM05D005169 ORTHO05D006436 1.6e-22 110.5 173 37.6
Lsat_1_v5_gn_4_182740 Lactuca sativa HOM05D005169 ORTHO05D006436 3.7e-22 109.4 194 37.1
Sabra16G0229100 Salix brachista HOM05D005169 ORTHO05D006436 3.7e-22 109.4 189 34.9
MSTRG.3296 Avicennia marina HOM05D005169 ORTHO05D006436 4.8e-22 109.0 196 36.7
FvH4_6g50860 Fragaria vesca HOM05D005169 ORTHO05D006436 4.8e-22 109.0 228 38.2
Lsat_1_v5_gn_2_91781 Lactuca sativa HOM05D005169 ORTHO05D006436 4.8e-22 109.0 195 35.4
ClCG09G019030 Citrullus lanatus HOM05D005169 ORTHO05D006436 6.3e-22 108.6 169 39.6
CsaV3_5G027330 Cucumis sativus L. HOM05D005169 ORTHO05D005030 1.4e-21 107.5 175 38.3
Medtr6g406210 Medicago truncatula HOM05D005169 ORTHO05D006436 1.4e-21 107.5 198 34.3
BraA10t44462Z Brassica rapa HOM05D005169 ORTHO05D006436 1.8e-21 107.1 187 36.4
Gohir.D11G070900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 1.8e-21 107.1 182 36.8
Gorai.007G076200 Gossypium raimondii HOM05D005169 ORTHO05D006436 1.8e-21 107.1 182 36.8
Psat1g056600 Pisum sativum HOM05D005169 ORTHO05D006436 1.8e-21 107.1 202 34.7
CARHR198620 Cardamine hirsuta HOM05D005169 ORTHO05D006436 2.4e-21 106.7 218 37.6
Thhalv10021959m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 2.4e-21 106.7 184 37.5
BolC9t59083H Brassica oleracea HOM05D005169 ORTHO05D006436 3.1e-21 106.3 172 37.8
MELO3C021551.2 Cucumis melo HOM05D005169 ORTHO05D006436 4.1e-21 105.9 181 39.2
HanXRQChr07g0198841 Helianthus annuus HOM05D005169 ORTHO05D006436 4.1e-21 105.9 173 37.6
FAN05G3636 Fragaria x ananassa HOM05D005169 ORTHO05D006436 9.0e-21 104.8 191 45.0
FAN09G4345 Fragaria x ananassa HOM05D005169 ORTHO05D006436 9.0e-21 104.8 194 35.1
A10p23980 Brassica napus HOM05D005169 ORTHO05D006436 1.5e-20 104.0 186 36.6
SHI27192 Sapria himalayana HOM05D005169 ORTHO05D006436 1.5e-20 104.0 186 33.3
CANSAT64G1588 Cannabis sativa HOM05D005169 ORTHO05D006436 2.6e-20 103.2 188 38.3
CARHR075420 Cardamine hirsuta HOM05D005169 ORTHO05D006436 3.4e-20 102.8 171 36.8
PSO170G4554 Papaver somniferum HOM05D005169 ORTHO05D006436 3.4e-20 102.8 217 36.4
ECA232G1653 Erigeron canadensis HOM05D005169 ORTHO05D006436 4.5e-20 102.4 186 33.9
PGR142G3938 Punica granatum HOM05D005169 ORTHO05D006436 4.5e-20 102.4 174 36.8
Ciclev10016934m.g Citrus clementina HOM05D005169 ORTHO05D006436 5.9e-20 102.1 196 35.2
BcaC05g30449 Brassica carinata HOM05D005169 ORTHO05D006436 7.6e-20 101.7 171 39.8
FAN14G0546 Fragaria x ananassa HOM05D005169 ORTHO05D006436 7.6e-20 101.7 197 42.1
PSO144G0121 Papaver somniferum HOM05D005169 ORTHO05D006436 7.6e-20 101.7 188 47.9
Lalb_Chr06g0175951 Lupinus albus HOM05D005169 ORTHO05D006436 1.0e-19 101.3 170 42.4
Sp3g00540 Schrenkiella parvula HOM05D005169 ORTHO05D006436 1.0e-19 101.3 179 48.0
AT3G01516 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 1.7e-19 100.5 166 45.2
MBI16_g27097_MAGBIO Magnolia biondii HOM05D005169 ORTHO05D006436 1.7e-19 100.5 169 33.7
RcHm_v2.0_Chr2g0172251 Rosa chinensis HOM05D005169 ORTHO05D006436 2.2e-19 100.1 179 46.9
Sed0004184 Sechium edule HOM05D005169 ORTHO05D006436 2.9e-19 99.8 175 34.3
SalBow7G2461 Salvia bowleyana HOM05D005169 ORTHO05D006436 6.5e-19 98.6 180 43.3
AL3G10640 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 8.5e-19 98.2 163 51.5
C09p62450 Brassica napus HOM05D005169 ORTHO05D006436 8.5e-19 98.2 180 33.9
Psat1g056720 Pisum sativum HOM05D005169 ORTHO05D006436 8.5e-19 98.2 199 32.2
Ah.05g173110 Amaranthus hybridus HOM05D005169 ORTHO05D006436 1.4e-18 97.4 187 35.8
A05p44490 Brassica napus HOM05D005169 ORTHO05D006436 1.4e-18 97.4 167 37.7
BraA05t23207Z Brassica rapa HOM05D005169 ORTHO05D006436 1.4e-18 97.4 167 37.7
Carub.0003s0056 Capsella rubella HOM05D005169 ORTHO05D006436 1.9e-18 97.1 166 37.3
AL6G25460 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 2.5e-18 96.7 177 45.8
Migut.H00106 Erythranthe guttata HOM05D005169 ORTHO05D006436 2.5e-18 96.7 182 35.7
SGA_v2.0_scaffold135G34886 Striga asiatica HOM05D005169 ORTHO05D006436 3.2e-18 96.3 201 31.3
BcaC03g13455 Brassica carinata HOM05D005169 ORTHO05D006436 9.3e-18 94.7 199 31.7
C09p75080 Brassica napus HOM05D005169 ORTHO05D006436 1.2e-17 94.4 162 37.7
BolC5t35156H Brassica oleracea HOM05D005169 ORTHO05D006436 1.2e-17 94.4 162 37.7
Nn3g16854 Nelumbo nucifera HOM05D005169 ORTHO05D006436 1.2e-17 94.4 184 33.7
Sopen12g026520 Solanum pennellii HOM05D005169 ORTHO05D006436 1.2e-17 94.4 126 42.9
Aa31LG5G10650 Aethionema arabicum HOM05D005169 ORTHO05D006436 2.1e-17 93.6 158 36.7
EL10Ac1g00764 Beta vulgaris HOM05D005169 ORTHO05D006436 2.1e-17 93.6 186 34.4
Lalb_Chr21g0319501 Lupinus albus HOM05D005169 ORTHO05D006436 2.1e-17 93.6 204 32.4
BcaC05g30410 Brassica carinata HOM05D005169 ORTHO05D006436 3.6e-17 92.8 162 37.0
DCAR_015051 Daucus carota HOM05D005169 ORTHO05D006436 3.6e-17 92.8 193 35.2
AUR62013741 Chenopodium quinoa HOM05D005169 ORTHO05D006436 7.9e-17 91.7 174 33.3
AUR62023410 Chenopodium quinoa HOM05D005169 ORTHO05D006436 7.9e-17 91.7 174 33.3
FAN05G4915 Fragaria x ananassa HOM05D005169 ORTHO05D006436 5.1e-16 89.0 215 32.6
TPR.G10806 Trifolium pratense HOM05D005169 ORTHO05D006436 5.1e-16 89.0 86 52.3
Carub.0006s1286 Capsella rubella HOM05D005169 ORTHO05D006436 1.1e-15 87.8 237 37.1
DCAR_021693 Daucus carota HOM05D005169 ORTHO05D006436 1.9e-15 87.0 167 32.9
BcaNung03104 Brassica carinata HOM05D005169 ORTHO05D006436 4.3e-15 85.9 174 36.8
Sp6g29350 Schrenkiella parvula HOM05D005169 ORTHO05D006436 4.3e-15 85.9 179 34.6
BraA02t05235Z Brassica rapa HOM05D005169 ORTHO05D006436 1.3e-14 84.3 199 41.2
Cpa.g.sc3104.1 Carica papaya HOM05D005169 ORTHO05D006436 1.6e-14 84.0 61 60.7
Glyma.05G006400 Glycine max HOM05D005169 ORTHO05D006436 4.8e-14 82.4 175 32.0
Thhalv10014646m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 6.3e-14 82.0 221 37.1
AT5G14690 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 1.1e-13 81.3 180 41.7
Sc16g0007930 Simmondsia chinensis HOM05D005169 ORTHO05D006436 1.1e-13 81.3 174 32.2
ATR0730G202 Amborella trichopoda HOM05D005169 ORTHO05D006436 2.4e-13 80.1 159 31.4
TPR.G35382 Trifolium pratense HOM05D005169 ORTHO05D006436 6.9e-13 78.6 149 31.5
Aa31LG11G14770 Aethionema arabicum HOM05D005169 ORTHO05D006436 1.5e-12 77.4 207 29.0
Ah.03g141220 Amaranthus hybridus HOM05D005169 ORTHO05D006436 7.7e-12 75.1 79 44.3
Duzib147G0144 Durio zibethinus HOM05D005169 ORTHO05D006436 7.7e-12 75.1 137 35.8
Glyma.19G006800 Glycine max HOM05D005169 ORTHO05D006436 8.5e-11 71.6 175 31.4
unitig_899.g15487 Utricularia gibba HOM05D005169 ORTHO05D006436 3.2e-10 69.7 46 58.7
C02p07220 Brassica napus HOM05D005169 ORTHO05D006436 5.5e-10 68.9 88 39.8
BolC2t06654H Brassica oleracea HOM05D005169 ORTHO05D006436 5.5e-10 68.9 88 39.8
CDE07G0703 Ceratophyllum demersum HOM05D005169 ORTHO05D006436 4.6e-09 65.9 54 50.0
HPP92_024720 Vanilla planifolia HOM05D005169 ORTHO05D006436 4.6e-09 65.9 45 60.0
Zm00001eb296260 Zea mays HOM05D005169 ORTHO05D006436 1.5e-07 60.8 165 29.1
CDE04G0766 Ceratophyllum demersum HOM05D005169 ORTHO05D006436 7.4e-07 58.5 35 71.4
CDE06G1771 Ceratophyllum demersum HOM05D000110 ORTHO05D000024 7.4e-07 58.5 50 54.0
MD09G1031300 Malus domestica HOM05D005169 ORTHO05D006436 2.8e-06 56.6 45 57.8
Os01g0638800 Oryza sativa ssp. japonica HOM05D005169 ORTHO05D006436 8.2e-06 55.1 46 52.2
SEGI_22807 Sequoiadendron giganteum HOM05D005169 ORTHO05D006436 8.2e-06 55.1 155 36.1


User provided reference genes

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