Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g030860 Solanum pennellii HOM05D007515 ORTHO05D009374 1.9e-66 255.8 135 100.0
Solyc02g086170.3 Solanum lycopersicum HOM05D007515 ORTHO05D009374 2.6e-63 245.4 135 94.8
PGSC0003DMG400026389 Solanum tuberosum HOM05D007515 ORTHO05D009374 2.3e-59 232.3 135 91.9
Nitab4.5_0007990g0020 Nicotiana tabacum HOM05D007515 ORTHO05D009374 7.3e-50 200.7 139 79.1
Nitab4.5_0000912g0070 Nicotiana tabacum HOM05D007515 ORTHO05D009374 4.0e-48 194.9 138 76.8
Peaxi162Scf00394g00816 Petunia axillaris HOM05D007515 ORTHO05D009374 1.5e-34 149.8 139 64.0
Ciclev10013056m.g Citrus clementina HOM05D007515 ORTHO05D009374 9.0e-24 114.0 139 53.2
QL12p016476 Quercus lobata HOM05D007515 ORTHO05D009374 1.2e-23 113.6 137 48.2
QL02p050960 Quercus lobata HOM05D007515 ORTHO05D009374 3.4e-23 112.1 137 47.4
Rhsim09G0050100 Rhododendron simsii HOM05D007515 ORTHO05D009374 7.6e-23 110.9 146 50.0
CiPaw.03G063100 Carya illinoinensis HOM05D007515 ORTHO05D009374 1.7e-22 109.8 132 50.8
Actinidia15892 Actinidia chinensis HOM05D007515 ORTHO05D009374 8.4e-22 107.5 142 47.9
Rhsim08G0082900 Rhododendron simsii HOM05D007515 ORTHO05D009374 8.4e-22 107.5 152 48.0
Lsat_1_v5_gn_2_79341 Lactuca sativa HOM05D007515 ORTHO05D009374 7.1e-21 104.4 133 50.4
Eucgr.J01508 Eucalyptus grandis HOM05D007515 ORTHO05D009374 4.6e-20 101.7 135 48.1
Hma1.2p1_0075F.1_g039300 Hydrangea macrophylla HOM05D007515 ORTHO05D009374 4.6e-20 101.7 139 47.5
Gohir.D11G170400 Gossypium hirsutum HOM05D007515 ORTHO05D009374 7.9e-20 100.9 137 48.9
Gorai.007G182300 Gossypium raimondii HOM05D007515 ORTHO05D009374 7.9e-20 100.9 137 48.9
Atru.chr1.1654 Acer truncatum HOM05D007515 ORTHO05D009374 1.0e-19 100.5 139 49.6
Gohir.A11G164100 Gossypium hirsutum HOM05D007515 ORTHO05D009374 1.0e-19 100.5 137 48.2
GSVIVG01031005001 Vitis vinifera HOM05D007515 ORTHO05D009374 1.3e-19 100.1 138 50.0
MSTRG.23581 Avicennia marina HOM05D007515 ORTHO05D009374 1.8e-19 99.8 142 46.5
Lalb_Chr02g0158161 Lupinus albus HOM05D007515 ORTHO05D009374 1.8e-19 99.8 128 46.1
unitig_736.g22559 Utricularia gibba HOM05D007515 ORTHO05D009374 1.8e-19 99.8 138 47.8
Duzib138G0915 Durio zibethinus HOM05D007515 ORTHO05D009374 3.0e-19 99.0 144 50.0
Nn4g23909 Nelumbo nucifera HOM05D007515 ORTHO05D009374 3.0e-19 99.0 139 48.2
RcHm_v2.0_Chr4g0422841 Rosa chinensis HOM05D007515 ORTHO05D009374 3.9e-19 98.6 135 46.7
HanXRQChr14g0440481 Helianthus annuus HOM05D007515 ORTHO05D009374 6.7e-19 97.8 136 47.8
Thecc.04G131400 Theobroma cacao HOM05D007515 ORTHO05D009374 8.7e-19 97.4 132 50.8
FvH4_4g18360 Fragaria vesca HOM05D007515 ORTHO05D009374 1.9e-18 96.3 135 45.2
PGR042G1312 Punica granatum HOM05D007515 ORTHO05D009374 4.3e-18 95.1 140 49.3
Aqoxy3G00240 Aquilegia oxysepala HOM05D007515 ORTHO05D009374 5.6e-18 94.7 140 44.3
DCAR_025907 Daucus carota HOM05D007515 ORTHO05D009374 7.4e-18 94.4 139 43.2
VMungo0464G1380 Vigna mungo HOM05D007515 ORTHO05D009374 8.1e-17 90.9 135 44.4
Sp6g27980 Schrenkiella parvula HOM05D007515 ORTHO05D009374 1.1e-16 90.5 134 44.8
Medtr6g018800 Medicago truncatula HOM05D007515 ORTHO05D009374 1.4e-16 90.1 142 45.8
Phvul.004G062000 Phaseolus vulgaris HOM05D007515 ORTHO05D009374 1.8e-16 89.7 138 44.9
TAR622G1055 Trochodendron aralioides HOM05D007515 ORTHO05D009374 3.1e-16 89.0 143 42.7
Potri.017G116500 Populus trichocarpa HOM05D007515 ORTHO05D009374 4.0e-16 88.6 146 45.2
Aa31LG11G13450 Aethionema arabicum HOM05D007515 ORTHO05D009374 9.0e-16 87.4 134 44.8
Lj2g0024883 Lotus japonicus HOM05D007515 ORTHO05D009374 9.0e-16 87.4 134 44.8
FAN12G0861 Fragaria x ananassa HOM05D007515 ORTHO05D009374 1.2e-15 87.0 148 41.2
FAN12G1919 Fragaria x ananassa HOM05D007515 ORTHO05D009374 1.2e-15 87.0 148 41.2
Manes.02G070000 Manihot esculenta HOM05D007515 ORTHO05D009374 1.2e-15 87.0 140 47.1
Carub.0006s1435 Capsella rubella HOM05D007515 ORTHO05D009374 1.5e-15 86.7 134 40.3
TPR.G32460 Trifolium pratense HOM05D007515 ORTHO05D009374 1.5e-15 86.7 135 45.2
ECA238G4180 Erigeron canadensis HOM05D007515 ORTHO05D009374 2.0e-15 86.3 143 44.1
Thhalv10014997m.g Eutrema salsugineum HOM05D007515 ORTHO05D009374 3.4e-15 85.5 134 43.3
BcaC03g18471 Brassica carinata HOM05D007515 ORTHO05D009374 5.8e-15 84.7 134 45.5
BolC2t06740H Brassica oleracea HOM05D007515 ORTHO05D009374 5.8e-15 84.7 134 45.5
Glyma.13G044900 Glycine max HOM05D007515 ORTHO05D009374 9.9e-15 84.0 142 43.0
Cc07_g08700 Coffea canephora HOM05D007515 ORTHO05D009374 1.7e-14 83.2 143 42.7
Migut.H00225 Erythranthe guttata HOM05D007515 ORTHO05D009374 1.7e-14 83.2 126 46.0
Haze_14170 Corylus avellana HOM05D007515 ORTHO05D009374 2.2e-14 82.8 129 43.4
CARHR197140 Cardamine hirsuta HOM05D007515 ORTHO05D009374 2.9e-14 82.4 137 43.8
BraA02t05312Z Brassica rapa HOM05D007515 ORTHO05D009374 3.8e-14 82.0 134 43.3
A02p03410 Brassica napus HOM05D007515 ORTHO05D009374 4.9e-14 81.6 134 43.3
THA.LOC104827160 Tarenaya hassleriana HOM05D007515 ORTHO05D009374 8.4e-14 80.9 139 43.9
AT5G16160 Arabidopsis thaliana HOM05D007515 ORTHO05D009374 2.4e-13 79.3 135 42.2
Hund16163 Selenicereus undatus HOM05D007515 ORTHO05D009374 2.4e-13 79.3 136 41.2
MD09G1254600 Malus domestica HOM05D007515 ORTHO05D009374 4.2e-13 78.6 142 42.3
Os01g0689600 Oryza sativa ssp. japonica HOM05D007515 ORTHO05D009374 5.5e-13 78.2 131 42.7
CDE06G2600 Ceratophyllum demersum HOM05D007515 ORTHO05D009374 1.2e-12 77.0 138 37.0
HPP92_011524 Vanilla planifolia HOM05D007515 ORTHO05D009374 1.2e-12 77.0 129 43.4
MELO3C008145.2 Cucumis melo HOM05D007515 ORTHO05D009374 2.1e-12 76.3 138 44.2
Oeu039735.1 Olea europaea HOM05D007515 ORTHO05D009374 2.1e-12 76.3 111 45.9
Cpa.g.sc170.54 Carica papaya HOM05D007515 ORTHO05D009374 2.7e-12 75.9 189 38.1
BcaNung02224 Brassica carinata HOM05D007515 ORTHO05D009374 3.5e-12 75.5 141 40.4
CDE12G0697 Ceratophyllum demersum HOM05D007515 ORTHO05D009374 4.6e-12 75.1 138 36.2
C02p08170 Brassica napus HOM05D007515 ORTHO05D009374 1.0e-11 73.9 135 39.3
MBI16_g28238_MAGBIO Magnolia biondii HOM05D007515 ORTHO05D009374 1.3e-11 73.6 123 41.5
SalBow3G4303 Salvia bowleyana HOM05D007515 ORTHO05D009374 1.3e-11 73.6 120 43.3
TAR622G0795 Trochodendron aralioides HOM05D007515 ORTHO05D009374 1.8e-11 73.2 125 42.4
CsaV3_2G033760 Cucumis sativus L. HOM05D007515 ORTHO05D009374 2.3e-11 72.8 135 39.3
Zm00001eb360590 Zea mays HOM05D007515 ORTHO05D009374 5.1e-11 71.6 134 38.8
Sed0014058 Sechium edule HOM05D007515 ORTHO05D009374 4.3e-10 68.6 136 38.2
Glyma.19G050400 Glycine max HOM05D007515 ORTHO05D009374 7.4e-10 67.8 136 36.0
Actinidia36332 Actinidia chinensis HOM05D007515 ORTHO05D009374 9.6e-10 67.4 58 62.1
SGA_v2.0_scaffold158G37447 Striga asiatica HOM05D007515 ORTHO05D009374 2.1e-09 66.2 131 38.2
COL.COLO4_09352 Corchorus olitorius HOM05D007515 ORTHO05D009374 1.8e-08 63.2 110 44.5
Zm00001eb156280 Zea mays HOM05D007515 ORTHO05D009374 4.0e-08 62.0 134 35.1
SGA_v2.0_scaffold158G37451 Striga asiatica HOM05D007515 ORTHO05D009374 6.9e-08 61.2 135 35.6
SGA_v2.0_scaffold49G18111 Striga asiatica HOM05D007515 ORTHO05D009374 6.9e-08 61.2 115 37.4
AagrBONN_evm.TU.Sc2ySwM_344.185 Anthoceros agrestis HOM05D007515 ORTHO05D009374 9.0e-08 60.8 143 33.6
arahy.Tifrunner.gnm1.ann1.70FVHQ Arachis hypogaea HOM05D007515 ORTHO05D009374 1.2e-07 60.5 115 36.5
arahy.Tifrunner.gnm1.ann1.TN7YSG Arachis hypogaea HOM05D007515 ORTHO05D009374 1.2e-07 60.5 117 38.5
vmacro18070 Vaccinium macrocarpon HOM05D007515 ORTHO05D009374 1.5e-07 60.1 211 32.7
Sc10g0001090 Simmondsia chinensis HOM05D007515 ORTHO05D009374 2.0e-07 59.7 95 40.0
ClCG11G007840 Citrullus lanatus HOM05D007515 ORTHO05D009374 5.8e-07 58.2 55 60.0
Psat1g080920 Pisum sativum HOM05D007515 ORTHO05D009374 5.8e-07 58.2 132 37.9
Sabra17G0096400 Salix brachista HOM05D007515 ORTHO05D009374 7.6e-07 57.8 103 40.8
Cfa007908 Carpinus fangiana HOM05D007515 ORTHO05D009374 1.0e-06 57.4 104 41.3
Dinv34811 Davidia involucrata HOM05D007515 ORTHO05D009374 1.7e-06 56.6 48 66.7


User provided reference genes

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