Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g030430 Solanum pennellii HOM05D007356 ORTHO05D009247 4.7e-245 850.9 471 100.0
Solyc02g085740.4 Solanum lycopersicum HOM05D007356 ORTHO05D009247 4.9e-234 814.3 471 95.5
PGSC0003DMG400012678 Solanum tuberosum HOM05D007356 ORTHO05D009247 3.8e-231 804.7 471 95.5
Nitab4.5_0008781g0020 Nicotiana tabacum HOM05D007356 ORTHO05D009247 1.3e-186 656.8 462 76.6
Nitab4.5_0004118g0090 Nicotiana tabacum HOM05D007356 ORTHO05D009247 1.1e-174 617.1 436 76.1
Peaxi162Scf01327g00135 Petunia axillaris HOM05D007356 ORTHO05D009247 6.5e-170 601.3 469 71.6
Hma1.2p1_0136F.1_g062070 Hydrangea macrophylla HOM05D007356 ORTHO05D009247 2.9e-114 416.4 439 55.1
Dinv34849 Davidia involucrata HOM05D007356 ORTHO05D009247 5.8e-110 402.1 433 53.1
vmacro05573 Vaccinium macrocarpon HOM05D007356 ORTHO05D009247 4.0e-103 379.4 518 47.3
Cc07_g09030 Coffea canephora HOM05D007356 ORTHO05D009247 6.8e-103 378.6 490 48.8
Rhsim10G0063400 Rhododendron simsii HOM05D007356 ORTHO05D009247 2.6e-102 376.7 426 52.3
Cfa007946 Carpinus fangiana HOM05D007356 ORTHO05D009247 8.1e-96 355.1 475 47.6
Haze_14128 Corylus avellana HOM05D007356 ORTHO05D009247 3.1e-95 353.2 475 47.4
Prupe.3G239800 Prunus persica HOM05D007356 ORTHO05D009247 1.2e-94 351.3 491 47.3
Lsat_1_v5_gn_4_153101 Lactuca sativa HOM05D007356 ORTHO05D009247 6.0e-91 339.0 444 48.2
Manes.01G108100 Manihot esculenta HOM05D007356 ORTHO05D009247 7.8e-91 338.6 438 48.6
HanXRQChr14g0438671 Helianthus annuus HOM05D007356 ORTHO05D009247 3.3e-89 333.2 440 48.2
Migut.H00199 Erythranthe guttata HOM05D007356 ORTHO05D009247 1.2e-88 331.3 481 45.3
Potri.017G112500 Populus trichocarpa HOM05D007356 ORTHO05D009247 1.1e-87 328.2 435 48.0
CSS0016710 Camellia sinensis var. sinensis HOM05D007356 ORTHO05D009247 3.1e-87 326.6 363 52.3
Oeu030757.2 Olea europaea HOM05D007356 ORTHO05D009247 2.0e-86 323.9 444 47.7
CANSAT64G1351 Cannabis sativa HOM05D007356 ORTHO05D009247 5.8e-86 322.4 491 42.8
Actinidia18124 Actinidia chinensis HOM05D007356 ORTHO05D009247 1.7e-85 320.9 409 48.4
QL02p052579 Quercus lobata HOM05D007356 ORTHO05D009247 6.4e-85 318.9 565 40.0
Cpa.g.sc179.26 Carica papaya HOM05D007356 ORTHO05D009247 1.1e-84 318.2 487 44.4
ClCG05G012060 Citrullus lanatus HOM05D007356 ORTHO05D009247 1.9e-84 317.4 490 42.9
MD09G1084700 Malus domestica HOM05D007356 ORTHO05D009247 4.2e-84 316.2 492 44.3
SGA_v2.0_scaffold33G13428 Striga asiatica HOM05D007356 ORTHO05D009247 7.1e-84 315.5 486 43.0
CsaV3_3G020350 Cucumis sativus L. HOM05D007356 ORTHO05D009247 2.7e-83 313.5 499 41.1
arahy.Tifrunner.gnm1.ann1.33CL05 Arachis hypogaea HOM05D007356 ORTHO05D009247 3.5e-83 313.2 433 44.3
arahy.Tifrunner.gnm1.ann1.3VIJ8X Arachis hypogaea HOM05D007356 ORTHO05D009247 4.6e-83 312.8 437 43.9
Atru.chr8.830 Acer truncatum HOM05D007356 ORTHO05D009247 1.7e-82 310.8 482 41.1
TAR374G1737 Trochodendron aralioides HOM05D007356 ORTHO05D009247 3.0e-82 310.1 455 45.1
FAN14G2396 Fragaria x ananassa HOM05D007356 ORTHO05D009247 8.7e-82 308.5 425 46.1
FvH4_6g45360 Fragaria vesca HOM05D007356 ORTHO05D009247 5.6e-81 305.8 425 45.9
PSO063G7355 Papaver somniferum HOM05D007356 ORTHO05D009247 3.6e-80 303.1 456 44.7
Thecc.04G137600 Theobroma cacao HOM05D007356 ORTHO05D009247 8.1e-80 302.0 487 42.5
MD17G1074100 Malus domestica HOM05D007356 ORTHO05D009247 7.6e-78 295.4 505 41.0
Sabra17G0093200 Salix brachista HOM05D007356 ORTHO05D009247 3.8e-77 293.1 447 44.3
Nn4g23745 Nelumbo nucifera HOM05D007356 ORTHO05D009247 4.9e-77 292.7 462 43.3
Lj2g0005002 Lotus japonicus HOM05D007356 ORTHO05D009247 1.4e-76 291.2 482 40.9
Ciclev10011716m.g Citrus clementina HOM05D007356 ORTHO05D009247 7.8e-75 285.4 479 39.7
TWI79G1397 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 2.3e-74 283.9 434 42.4
THA.LOC104820954 Tarenaya hassleriana HOM05D007356 ORTHO05D009247 3.0e-74 283.5 450 41.6
Glyma.13G047100 Glycine max HOM05D007356 ORTHO05D009247 8.7e-74 282.0 442 43.0
Duzib133G0592 Durio zibethinus HOM05D007356 ORTHO05D009247 1.1e-73 281.6 484 41.9
DCAR_017218 Daucus carota HOM05D007356 ORTHO05D009247 1.5e-73 281.2 411 45.3
TPR.G32461 Trifolium pratense HOM05D007356 ORTHO05D009247 1.9e-73 280.8 439 42.4
COL.COLO4_16192 Corchorus olitorius HOM05D007356 ORTHO05D009247 3.3e-73 280.0 434 43.1
Aqoxy3G03920 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 1.3e-72 278.1 457 40.7
TWI31G0521 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 1.3e-72 278.1 484 39.5
Gohir.A11G162300 Gossypium hirsutum HOM05D007356 ORTHO05D009247 4.8e-72 276.2 484 41.1
ECA232G5000 Erigeron canadensis HOM05D007356 ORTHO05D009247 6.9e-71 272.3 347 49.9
Lalb_Chr06g0174681 Lupinus albus HOM05D007356 ORTHO05D009247 7.6e-70 268.9 439 42.4
Phvul.004G062800 Phaseolus vulgaris HOM05D007356 ORTHO05D009247 1.3e-69 268.1 443 40.4
Hund13734 Selenicereus undatus HOM05D007356 ORTHO05D009247 8.4e-69 265.4 507 40.4
Gorai.007G180100 Gossypium raimondii HOM05D007356 ORTHO05D009247 1.4e-68 264.6 478 40.8
VMungo0464G1268 Vigna mungo HOM05D007356 ORTHO05D009247 1.2e-67 261.5 450 40.2
Gohir.D11G168600 Gossypium hirsutum HOM05D007356 ORTHO05D009247 1.0e-66 258.5 479 40.3
MBI16_g25107_MAGBIO Magnolia biondii HOM05D007356 ORTHO05D009247 6.7e-66 255.8 463 41.3
Ah.16g101940 Amaranthus hybridus HOM05D007356 ORTHO05D009247 4.3e-65 253.1 493 37.9
Medtr6g017235 Medicago truncatula HOM05D007356 ORTHO05D009247 4.3e-65 253.1 425 40.0
unitig_60.g25515 Utricularia gibba HOM05D007356 ORTHO05D009247 6.2e-64 249.2 429 39.9
PSO782G4491 Papaver somniferum HOM05D007356 ORTHO05D009247 6.9e-63 245.7 381 44.1
Potri.004G102400 Populus trichocarpa HOM05D007356 ORTHO05D009247 7.6e-62 242.3 356 46.1
EL10Ac2g04607 Beta vulgaris HOM05D007356 ORTHO05D009247 1.7e-61 241.1 596 33.9
AUR62014539 Chenopodium quinoa HOM05D007356 ORTHO05D009247 4.2e-60 236.5 463 36.9
Aa31LG5G12990 Aethionema arabicum HOM05D007356 ORTHO05D009247 2.5e-57 227.3 482 35.7
AL3G11850 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 2.5e-57 227.3 503 36.0
Eucgr.J01469 Eucalyptus grandis HOM05D007356 ORTHO05D009247 7.4e-57 225.7 369 39.8
Psat1g012920 Pisum sativum HOM05D007356 ORTHO05D009247 7.4e-57 225.7 334 44.3
CDE08G0776 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 1.5e-54 218.0 457 37.2
AUR62008964 Chenopodium quinoa HOM05D007356 ORTHO05D009247 2.0e-54 217.6 367 40.1
CARHR076490 Cardamine hirsuta HOM05D007356 ORTHO05D009247 1.2e-51 208.4 492 34.3
RcHm_v2.0_Chr2g0163141 Rosa chinensis HOM05D007356 ORTHO05D009247 1.2e-51 208.4 320 45.0
Ca_26179_v3 Cicer arietinum L. HOM05D007356 ORTHO05D009247 9.7e-49 198.7 297 44.1
FAN09G4466 Fragaria x ananassa HOM05D007356 ORTHO05D009247 9.7e-49 198.7 309 41.7
CiPaw.03G059600 Carya illinoinensis HOM05D007356 ORTHO05D009247 7.7e-46 189.1 290 42.4
Sed0002469 Sechium edule HOM05D007356 ORTHO05D009247 1.7e-45 188.0 317 42.0
Lj2A447T55 Lonicera japonica HOM05D007356 ORTHO05D009247 8.5e-45 185.7 181 59.7
GSVIVG01036444001 Vitis vinifera HOM05D007356 ORTHO05D009247 8.5e-45 185.7 199 53.3
MELO3C023764.2 Cucumis melo HOM05D007356 ORTHO05D009247 5.5e-44 183.0 276 42.4
CDE02G0316 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 2.1e-43 181.0 401 36.4
Os01g0694200 Oryza sativa ssp. japonica HOM05D007356 ORTHO05D009247 2.8e-40 170.6 438 33.3
PGR042G1693 Punica granatum HOM05D007356 ORTHO05D009247 1.8e-39 167.9 439 33.3
Zm00001eb155990 Zea mays HOM05D007356 ORTHO05D009247 5.3e-39 166.4 445 32.4
Sc11g0008200 Simmondsia chinensis HOM05D007356 ORTHO05D009247 2.7e-35 154.1 329 38.0
ATR0681G386 Amborella trichopoda HOM05D007356 ORTHO05D009247 1.0e-34 152.1 529 30.4
Aqoxy3G02147 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 9.4e-28 129.0 142 47.9
Sed0015927 Sechium edule HOM05D007356 ORTHO05D009247 1.4e-26 125.2 169 42.6
Glyma.19G045202 Glycine max HOM05D007356 ORTHO05D009247 5.3e-23 113.2 202 40.1
AL3G11840 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 2.2e-21 107.8 184 39.1
Sc11g0008210 Simmondsia chinensis HOM05D007356 ORTHO05D009247 1.9e-20 104.8 142 44.4
Lsat_1_v5_gn_3_87441 Lactuca sativa HOM05D007356 ORTHO05D009247 1.5e-17 95.1 120 49.2
SMO145G0090 Selaginella moellendorffii HOM05D007356 ORTHO05D009247 2.6e-17 94.4 369 27.6
Lj2C447T11 Lonicera japonica HOM05D007356 ORTHO05D009247 3.7e-16 90.5 119 47.9
SEGI_12886 Sequoiadendron giganteum HOM05D007356 ORTHO05D009247 1.1e-12 79.0 256 28.9
AUR62035477 Chenopodium quinoa HOM05D000128 ORTHO05D000059 4.7e-11 73.6 92 41.3
Actinidia15867 Actinidia chinensis HOM05D007356 ORTHO05D009247 5.2e-10 70.1 68 55.9
Pp3c9_14770 Physcomitrium patens HOM05D007356 ORTHO05D009247 3.4e-09 67.4 192 32.3
Mapoly0080s0048 Marchantia polymorpha HOM05D007356 ORTHO05D009247 2.8e-08 64.3 151 29.8
AagrBONN_evm.TU.Sc2ySwM_344.3211 Anthoceros agrestis HOM05D007356 ORTHO05D009247 8.3e-08 62.8 207 26.6
CBR_g44341 Chara braunii HOM05D007356 ORTHO05D009247 4.1e-07 60.5 91 38.5
Pp3c15_5150 Physcomitrium patens HOM05D007356 ORTHO05D009247 9.1e-07 59.3 113 37.2


User provided reference genes

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