Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g029670 Solanum pennellii HOM05D000081 ORTHO05D019474 1.1e-33 146.0 71 100.0
Sopen10g012520 Solanum pennellii HOM05D000004 ORTHO05D000002 3.9e-10 67.8 41 80.5
Lj1A125T41 Lonicera japonica HOM05D000081 ORTHO05D000036 5.6e-09 63.9 45 66.7
EL10Ac7g15877 Beta vulgaris HOM05D000081 ORTHO05D000036 9.5e-09 63.2 37 78.4
Duzib170G1084 Durio zibethinus HOM05D000081 ORTHO05D000036 1.2e-08 62.8 45 68.9
Hma1.2p1_1421F.1_g282400 Hydrangea macrophylla HOM05D000081 ORTHO05D000036 1.2e-08 62.8 37 75.7
CAN.G474.19 Capsicum annuum HOM05D000081 ORTHO05D000036 2.1e-08 62.0 35 85.7
AUR62009710 Chenopodium quinoa HOM05D000081 ORTHO05D000036 2.1e-08 62.0 37 75.7
Nitab4.5_0000684g0170 Nicotiana tabacum HOM05D000081 ORTHO05D000036 2.1e-08 62.0 35 85.7
Solyc06g066370.4 Solanum lycopersicum HOM05D000081 ORTHO05D000036 2.1e-08 62.0 35 85.7
PGSC0003DMG400016769 Solanum tuberosum HOM05D000081 ORTHO05D000036 2.1e-08 62.0 35 85.7
Solyc10g019160.2 Solanum lycopersicum HOM05D000081 ORTHO05D019474 3.6e-08 61.2 38 81.6
CSS0013701 Camellia sinensis var. sinensis HOM05D000081 ORTHO05D000036 4.7e-08 60.8 37 78.4
CSS0049619 Camellia sinensis var. sinensis HOM05D000081 ORTHO05D000036 4.7e-08 60.8 36 80.6
Gorai.003G150700 Gossypium raimondii HOM05D000081 ORTHO05D000036 4.7e-08 60.8 36 80.6
Potri.019G123500 Populus trichocarpa HOM05D000081 ORTHO05D000036 4.7e-08 60.8 36 80.6
Sabra19G0122100 Salix brachista HOM05D000081 ORTHO05D000036 4.7e-08 60.8 36 80.6
Sabra19G0132200 Salix brachista HOM05D000081 ORTHO05D000036 4.7e-08 60.8 36 80.6
Sopen06g021620 Solanum pennellii HOM05D000081 ORTHO05D000036 6.2e-08 60.5 32 90.6
Gohir.D03G143400 Gossypium hirsutum HOM05D000081 ORTHO05D000036 1.1e-07 59.7 45 66.7
Nitab4.5_0000046g0020 Nicotiana tabacum HOM05D000081 ORTHO05D000036 1.1e-07 59.7 35 82.9
Peaxi162Scf00055g01910 Petunia axillaris HOM05D000081 ORTHO05D000036 1.1e-07 59.7 35 82.9
Phvul.008G251300 Phaseolus vulgaris HOM05D000081 ORTHO05D000036 1.1e-07 59.7 41 73.2
Glyma.14G200200 Glycine max HOM05D000081 ORTHO05D000036 1.4e-07 59.3 35 82.9
CiPaw.13G068200 Carya illinoinensis HOM05D000081 ORTHO05D000036 1.8e-07 58.9 36 77.8
Cc01_g14950 Coffea canephora HOM05D000081 ORTHO05D000036 2.4e-07 58.5 35 80.0
Duzib168G0414 Durio zibethinus HOM05D000081 ORTHO05D000036 2.4e-07 58.5 35 80.0
ECA247G2169 Erigeron canadensis HOM05D000081 ORTHO05D000036 2.4e-07 58.5 36 80.6
Hma1.2p1_1692F.1_g297980 Hydrangea macrophylla HOM05D000081 ORTHO05D000036 2.4e-07 58.5 35 74.3
Thecc.09G358800 Theobroma cacao HOM05D000081 ORTHO05D000036 2.4e-07 58.5 36 77.8
GSVIVG01024624001 Vitis vinifera HOM05D000081 ORTHO05D000036 2.4e-07 58.5 33 81.8
Glyma.02G232600 Glycine max HOM05D000081 ORTHO05D000036 3.1e-07 58.2 35 80.0
Nn2g11035 Nelumbo nucifera HOM05D000081 ORTHO05D000036 3.1e-07 58.2 34 79.4
Actinidia23189 Actinidia chinensis HOM05D000081 ORTHO05D000036 4.0e-07 57.8 35 77.1
Actinidia32602 Actinidia chinensis HOM05D000081 ORTHO05D000036 4.0e-07 57.8 35 77.1
Oeu050023.1 Olea europaea HOM05D000081 ORTHO05D000036 4.0e-07 57.8 32 87.5
CiPaw.14G053400 Carya illinoinensis HOM05D000081 ORTHO05D000036 6.8e-07 57.0 36 75.0
Haze_24423 Corylus avellana HOM05D000081 ORTHO05D000036 6.8e-07 57.0 45 62.2
VMungo0647G1508 Vigna mungo HOM05D000081 ORTHO05D000036 6.8e-07 57.0 40 70.0
Cpa.g.sc2.345 Carica papaya HOM05D000081 ORTHO05D000036 8.9e-07 56.6 34 79.4
Cfa011787 Carpinus fangiana HOM05D000081 ORTHO05D000036 8.9e-07 56.6 35 77.1
Lalb_Chr04g0251901 Lupinus albus HOM05D000081 ORTHO05D000036 8.9e-07 56.6 45 64.4
Lalb_Chr10g0103641 Lupinus albus HOM05D000081 ORTHO05D000036 8.9e-07 56.6 36 77.8
Lsat_1_v5_gn_9_14580 Lactuca sativa HOM05D000081 ORTHO05D000036 1.2e-06 56.2 35 74.3
Sabra13G0123400 Salix brachista HOM05D000081 ORTHO05D000036 1.2e-06 56.2 35 77.1
Atru.chr1.2580 Acer truncatum HOM05D000081 ORTHO05D000036 1.5e-06 55.8 46 63.0
CDE07G2047 Ceratophyllum demersum HOM05D000081 ORTHO05D000036 1.5e-06 55.8 34 76.5
HanXRQChr08g0228641 Helianthus annuus HOM05D000081 ORTHO05D000036 1.5e-06 55.8 35 71.4
Dinv35420 Davidia involucrata HOM05D000081 ORTHO05D000036 2.0e-06 55.5 36 72.2
Manes.02G189600 Manihot esculenta HOM05D000081 ORTHO05D000036 2.0e-06 55.5 35 77.1
Prupe.6G046900 Prunus persica HOM05D000081 ORTHO05D000036 2.0e-06 55.5 35 77.1
PGR102G1030 Punica granatum HOM05D000081 ORTHO05D000036 2.0e-06 55.5 35 77.1
ClCG03G000130 Citrullus lanatus HOM05D000081 ORTHO05D000036 2.6e-06 55.1 30 86.7
MELO3C020489.2 Cucumis melo HOM05D000081 ORTHO05D000036 2.6e-06 55.1 30 86.7
Potri.013G153400 Populus trichocarpa HOM05D000081 ORTHO05D000036 2.6e-06 55.1 35 77.1
Sed0025056 Sechium edule HOM05D000081 ORTHO05D000036 2.6e-06 55.1 30 86.7
TAR636G0650 Trochodendron aralioides HOM05D000081 ORTHO05D000036 2.6e-06 55.1 36 69.4
CDE06G0733 Ceratophyllum demersum HOM05D000081 ORTHO05D000036 3.4e-06 54.7 34 76.5
Ca_15015_v3 Cicer arietinum L. HOM05D000081 ORTHO05D000036 3.4e-06 54.7 39 71.8
Gohir.A03G025100 Gossypium hirsutum HOM05D000081 ORTHO05D000036 3.4e-06 54.7 35 77.1
TPR.G25716 Trifolium pratense HOM05D000081 ORTHO05D000036 3.4e-06 54.7 39 71.8
MD03G1057400 Malus domestica HOM05D000081 ORTHO05D000036 4.4e-06 54.3 34 76.5
SGA_v2.0_scaffold120G32961 Striga asiatica HOM05D000081 ORTHO05D000036 4.4e-06 54.3 40 70.0
TWI75G0759 Tripterygium wilfordii HOM05D000081 ORTHO05D000036 4.4e-06 54.3 45 64.4
FAN11G0874 Fragaria x ananassa HOM05D000081 ORTHO05D000036 5.8e-06 53.9 35 74.3
FAN16G2813 Fragaria x ananassa HOM05D000081 ORTHO05D000036 5.8e-06 53.9 35 74.3
FAN21G1801 Fragaria x ananassa HOM05D000081 ORTHO05D000036 5.8e-06 53.9 35 74.3
FAN25G2604 Fragaria x ananassa HOM05D000081 ORTHO05D000036 5.8e-06 53.9 35 74.3
Os05g0343400 Oryza sativa ssp. japonica HOM05D000081 ORTHO05D000036 5.8e-06 53.9 32 81.2
QL07p033683 Quercus lobata HOM05D000081 ORTHO05D000036 5.8e-06 53.9 37 70.3
RcHm_v2.0_Chr5g0071811 Rosa chinensis HOM05D000081 ORTHO05D000036 5.8e-06 53.9 46 63.0
MSTRG.18546 Avicennia marina HOM05D000081 ORTHO05D000036 7.6e-06 53.5 46 63.0
DCAR_002945 Daucus carota HOM05D000081 ORTHO05D019474 9.9e-06 53.1 35 74.3
Nn1g09473 Nelumbo nucifera HOM05D000081 ORTHO05D019474 9.9e-06 53.1 34 76.5
TWI31G0345 Tripterygium wilfordii HOM05D000081 ORTHO05D000036 9.9e-06 53.1 45 62.2
HPP92_000722 Vanilla planifolia HOM05D000081 ORTHO05D000036 9.9e-06 53.1 37 67.6


User provided reference genes

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