Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g029270 Solanum pennellii HOM05D001705 ORTHO05D002725 1.9e-72 277.7 548 100.0
PGSC0003DMG400003544 Solanum tuberosum HOM05D001705 ORTHO05D002725 3.3e-64 250.4 548 96.4
CAN.G358.8 Capsicum annuum HOM05D001705 ORTHO05D002725 1.7e-57 228.0 548 94.0
Nitab4.5_0004086g0010 Nicotiana tabacum HOM05D001705 ORTHO05D002725 2.3e-54 217.6 548 92.7
Nitab4.5_0002266g0090 Nicotiana tabacum HOM05D001705 ORTHO05D002725 1.4e-51 208.4 548 90.1
Peaxi162Scf00083g01720 Petunia axillaris HOM05D001705 ORTHO05D002725 4.6e-50 203.4 547 71.1
Solyc02g084600.4 Solanum lycopersicum HOM05D001705 ORTHO05D002725 2.0e-45 188.0 203 81.8
Peaxi162Scf00083g01719 Petunia axillaris HOM05D001705 ORTHO05D002725 1.5e-40 171.8 548 68.1
Oeu005148.1 Olea europaea HOM05D001705 ORTHO05D002725 2.6e-37 161.0 546 85.3
FvH4_1g12240 Fragaria vesca HOM05D001705 ORTHO05D002725 1.7e-33 148.3 548 75.9
Prupe.7G164400 Prunus persica HOM05D001705 ORTHO05D002725 1.5e-32 145.2 548 82.3
CSS0005183 Camellia sinensis var. sinensis HOM05D001705 ORTHO05D002725 1.9e-32 144.8 259 80.7
Cc07_g10340 Coffea canephora HOM05D001705 ORTHO05D002725 1.9e-32 144.8 548 82.8
Cfa006934 Carpinus fangiana HOM05D001705 ORTHO05D002725 2.5e-32 144.4 257 66.1
Potri.007G016700 Populus trichocarpa HOM05D001705 ORTHO05D002725 4.3e-32 143.7 257 78.6
FAN19G2547 Fragaria x ananassa HOM05D004495 ORTHO05D005361 5.6e-32 143.3 548 75.5
Rhsim08G0036100 Rhododendron simsii HOM05D001705 ORTHO05D002725 9.6e-32 142.5 546 82.4
Sabra05G0096800 Salix brachista HOM05D001705 ORTHO05D002725 3.6e-31 140.6 544 83.8
CiPaw.07G055300 Carya illinoinensis HOM05D001705 ORTHO05D002725 4.7e-31 140.2 548 81.9
Duzib147G0685 Durio zibethinus HOM05D001705 ORTHO05D002725 1.4e-30 138.7 259 78.4
Thecc.01G024300 Theobroma cacao HOM05D001705 ORTHO05D002725 1.4e-30 138.7 259 79.2
EL10Ac6g14594 Beta vulgaris HOM05D001705 ORTHO05D002725 1.8e-30 138.3 259 77.6
MSTRG.2503 Avicennia marina HOM05D001705 ORTHO05D002725 3.1e-30 137.5 258 78.3
GSVIVG01018835001 Vitis vinifera HOM05D001705 ORTHO05D002725 3.1e-30 137.5 259 75.3
Manes.01G142200 Manihot esculenta HOM05D001705 ORTHO05D002725 2.0e-29 134.8 255 79.6
Gohir.A12G061400 Gossypium hirsutum HOM05D001705 ORTHO05D002725 2.6e-29 134.4 259 71.8
Migut.H02487 Erythranthe guttata HOM05D001705 ORTHO05D002725 4.4e-29 133.7 257 74.7
TAR628G0632 Trochodendron aralioides HOM05D001705 ORTHO05D002725 5.8e-29 133.3 258 77.1
COL.COLO4_21972 Corchorus olitorius HOM05D001705 ORTHO05D002725 7.6e-29 132.9 548 86.1
Nn5g29193 Nelumbo nucifera HOM05D001705 ORTHO05D002725 9.9e-29 132.5 259 78.4
Sabra07G0013900 Salix brachista HOM05D001705 ORTHO05D002725 9.9e-29 132.5 257 76.7
Haze_03816 Corylus avellana HOM05D001705 ORTHO05D002725 1.3e-28 132.1 259 79.2
Gohir.D12G061500 Gossypium hirsutum HOM05D001705 ORTHO05D002725 6.4e-28 129.8 259 71.0
Gorai.008G064700 Gossypium raimondii HOM05D001705 ORTHO05D002725 6.4e-28 129.8 259 71.0
VMungo0251G2871 Vigna mungo HOM05D001705 ORTHO05D002725 3.2e-27 127.5 255 68.2
MD02G1136300 Malus domestica HOM05D004495 ORTHO05D005361 4.2e-27 127.1 546 80.6
Phvul.003G258800 Phaseolus vulgaris HOM05D001705 ORTHO05D002725 5.4e-27 126.7 255 65.1
FAN28G1436 Fragaria x ananassa HOM05D001705 ORTHO05D002725 9.3e-27 125.9 548 73.2
Eucgr.I02373 Eucalyptus grandis HOM05D001705 ORTHO05D002725 1.2e-26 125.6 257 77.8
Cpa.g.sc6.205 Carica papaya HOM05D001705 ORTHO05D002725 1.6e-26 125.2 257 79.0
FAN23G3072 Fragaria x ananassa HOM05D004495 ORTHO05D005361 4.6e-26 123.6 548 74.3
Aqoxy6G02406 Aquilegia oxysepala HOM05D001705 ORTHO05D002725 6.0e-26 123.2 252 77.4
EL10As8g23862 Beta vulgaris HOM05D001705 ORTHO05D002725 7.8e-26 122.9 256 65.6
vmacro22099 Vaccinium macrocarpon HOM05D001705 ORTHO05D002725 1.0e-25 122.5 545 80.6
Potri.005G117700 Populus trichocarpa HOM05D001705 ORTHO05D002725 1.7e-25 121.7 544 83.1
Dinv40050 Davidia involucrata HOM05D001705 ORTHO05D002725 2.5e-24 117.9 162 77.8
AUR62007790 Chenopodium quinoa HOM05D001705 ORTHO05D002725 7.3e-24 116.3 256 62.1
AUR62002982 Chenopodium quinoa HOM05D000312 ORTHO05D002725 1.3e-23 115.5 254 54.3
ClCG01G020070 Citrullus lanatus HOM05D001705 ORTHO05D002725 1.3e-23 115.5 259 64.1
CsaV3_6G046840 Cucumis sativus L. HOM05D001705 ORTHO05D002725 3.6e-23 114.0 259 76.4
MELO3C007881.2 Cucumis melo HOM05D001705 ORTHO05D002725 4.8e-23 113.6 258 75.6
FAN26G1006 Fragaria x ananassa HOM05D001705 ORTHO05D002725 1.4e-22 112.1 259 54.8
Sed0016929 Sechium edule HOM05D001705 ORTHO05D002725 1.8e-22 111.7 260 77.3
Glyma.16G131500 Glycine max HOM05D001705 ORTHO05D002725 5.3e-22 110.2 255 73.7
Ah.02g124770 Amaranthus hybridus HOM05D001705 ORTHO05D002725 1.5e-21 108.6 257 52.9
PSO675G6176 Papaver somniferum HOM05D001705 ORTHO05D002725 7.6e-21 106.3 255 74.1
ATR0661G193 Amborella trichopoda HOM05D001705 ORTHO05D002725 1.7e-20 105.1 257 74.3
HanXRQChr16g0530901 Helianthus annuus HOM05D001705 ORTHO05D002725 1.7e-20 105.1 259 61.4
RcHm_v2.0_Chr2g0100021 Rosa chinensis HOM05D001705 ORTHO05D002725 4.9e-20 103.6 545 70.6
AUR62007789 Chenopodium quinoa HOM05D000312 ORTHO05D002725 6.4e-20 103.2 245 60.8
Sc07g0007330 Simmondsia chinensis HOM05D001705 ORTHO05D002725 7.1e-19 99.8 251 51.4
Lsat_1_v5_gn_3_75380 Lactuca sativa HOM05D001705 ORTHO05D002725 9.3e-19 99.4 548 75.0
TWI09G1571 Tripterygium wilfordii HOM05D001705 ORTHO05D002725 1.6e-18 98.6 259 54.1
SGA_v2.0_scaffold2G01238 Striga asiatica HOM05D001705 ORTHO05D002725 6.0e-18 96.7 257 65.0
ECA246G2311 Erigeron canadensis HOM05D000042 ORTHO05D000980 3.0e-17 94.4 256 60.2
Actinidia19236 Actinidia chinensis HOM05D001705 ORTHO05D002725 3.9e-17 94.0 74 60.8
EL10Ac6g15676 Beta vulgaris HOM05D001705 ORTHO05D002725 1.1e-16 92.4 257 51.0
Ah.02g125140 Amaranthus hybridus HOM05D001705 ORTHO05D002725 1.9e-16 91.7 256 72.3
Hund14023 Selenicereus undatus HOM05D001705 ORTHO05D002725 1.9e-16 91.7 257 69.3
AUR62003299 Chenopodium quinoa HOM05D002120 ORTHO05D002725 1.3e-15 89.0 256 68.0
HanXRQChr16g0530911 Helianthus annuus HOM05D001705 ORTHO05D002725 2.1e-15 88.2 49 83.7
SalBow8G3503 Salvia bowleyana HOM05D001705 ORTHO05D002725 2.1e-15 88.2 254 72.8
PSO384G2660 Papaver somniferum HOM05D003705 ORTHO05D002725 3.6e-15 87.4 257 52.9
Ah.13g066700 Amaranthus hybridus HOM05D003705 ORTHO05D002725 3.1e-14 84.3 255 69.4
SGA_v2.0_scaffold2G01235 Striga asiatica HOM05D002120 ORTHO05D002725 4.0e-14 84.0 157 68.2
AUR62007657 Chenopodium quinoa HOM05D004495 ORTHO05D005361 2.0e-13 81.6 257 59.5
AUR62027162 Chenopodium quinoa HOM05D001705 ORTHO05D002725 5.8e-13 80.1 258 66.3
DCAR_021489 Daucus carota HOM05D001705 ORTHO05D002725 2.2e-12 78.2 49 79.6
AUR62027163 Chenopodium quinoa HOM05D001705 ORTHO05D002725 2.9e-12 77.8 257 66.5
AUR62007788 Chenopodium quinoa HOM05D001705 ORTHO05D002725 3.8e-12 77.4 135 76.3
AUR62007644 Chenopodium quinoa HOM05D004495 ORTHO05D005361 1.1e-11 75.9 50 74.0
Ah.02g127430 Amaranthus hybridus HOM05D001705 ORTHO05D002725 3.2e-11 74.3 50 74.0
Atru.chr3.757 Acer truncatum HOM05D001705 ORTHO05D002725 7.1e-11 73.2 50 72.0
Ah.03g146170 Amaranthus hybridus HOM05D001705 ORTHO05D002725 1.2e-10 72.4 256 59.0
PSO541G3058 Papaver somniferum HOM05D001705 ORTHO05D002725 1.2e-10 72.4 49 71.4
PSO384G1529 Papaver somniferum HOM05D000001 ORTHO05D002725 1.6e-10 72.0 257 46.7
PSO675G9374 Papaver somniferum HOM05D001705 ORTHO05D002725 3.5e-10 70.9 48 72.9
Ah.09g225520 Amaranthus hybridus HOM05D001705 ORTHO05D002725 6.0e-10 70.1 49 69.4
PSO384G4644 Papaver somniferum HOM05D001705 ORTHO05D002725 7.9e-10 69.7 158 67.1
PSO384G2367 Papaver somniferum HOM05D001705 ORTHO05D002725 1.0e-09 69.3 141 73.0
PSO063G6131 Papaver somniferum HOM05D001705 ORTHO05D002725 1.8e-09 68.6 49 67.3
Ah.03g141660 Amaranthus hybridus HOM05D003705 ORTHO05D002725 3.0e-09 67.8 125 79.2
PSO675G6841 Papaver somniferum HOM05D001705 ORTHO05D002725 6.7e-09 66.6 50 64.0
PSO541G4650 Papaver somniferum HOM05D001705 ORTHO05D002725 2.5e-08 64.7 47 66.0
arahy.Tifrunner.gnm1.ann1.9YN8B0 Arachis hypogaea HOM05D003705 ORTHO05D007730 2.8e-07 61.2 50 58.0
arahy.Tifrunner.gnm1.ann1.UDT0Z0 Arachis hypogaea HOM05D003705 ORTHO05D007730 2.8e-07 61.2 50 58.0
SEGI_16014 Sequoiadendron giganteum HOM05D003705 ORTHO05D002217 4.8e-07 60.5 50 58.0
Nn3g18556 Nelumbo nucifera HOM05D003705 ORTHO05D007730 8.1e-07 59.7 50 58.0
Medtr1g115225 Medicago truncatula HOM05D003705 ORTHO05D007730 1.1e-06 59.3 50 56.0
PSO384G1457 Papaver somniferum HOM05D001705 ORTHO05D002725 1.1e-06 59.3 47 59.6
MD13G1001800 Malus domestica HOM05D003705 ORTHO05D007730 1.4e-06 58.9 50 60.0
PSO541G4589 Papaver somniferum HOM05D001705 ORTHO05D002725 1.4e-06 58.9 140 71.4
RcHm_v2.0_Chr4g0447111 Rosa chinensis HOM05D003705 ORTHO05D007730 1.4e-06 58.9 50 56.0
VMungo0720G0185 Vigna mungo HOM05D003705 ORTHO05D007730 1.8e-06 58.5 50 54.0
Duzib248G0348 Durio zibethinus HOM05D003705 ORTHO05D007730 3.1e-06 57.8 50 56.0
FvH4_4g37290 Fragaria vesca HOM05D003705 ORTHO05D007730 3.1e-06 57.8 50 54.0
FAN17G0997 Fragaria x ananassa HOM05D003705 ORTHO05D007730 3.1e-06 57.8 50 54.0
Glyma.10G288400 Glycine max HOM05D003705 ORTHO05D007730 3.1e-06 57.8 50 54.0
Medtr8g076360 Medicago truncatula HOM05D002120 ORTHO05D002725 3.1e-06 57.8 50 58.0
Medtr8g076378 Medicago truncatula HOM05D002120 ORTHO05D002725 3.1e-06 57.8 50 58.0
Medtr8g076380 Medicago truncatula HOM05D002120 ORTHO05D002725 3.1e-06 57.8 50 58.0
Medtr8g076410 Medicago truncatula HOM05D002120 ORTHO05D002725 3.1e-06 57.8 50 58.0
PSO675G0217 Papaver somniferum HOM05D001705 ORTHO05D002217 3.1e-06 57.8 50 60.0
Prupe.1G350800 Prunus persica HOM05D003705 ORTHO05D007730 3.1e-06 57.8 50 54.0
Thecc.02G153100 Theobroma cacao HOM05D003705 ORTHO05D007730 3.1e-06 57.8 50 56.0
Psat6g235760 Pisum sativum HOM05D003705 ORTHO05D007730 4.0e-06 57.4 50 52.0
Cpa.g.sc247.2 Carica papaya HOM05D003705 ORTHO05D007730 5.3e-06 57.0 50 54.0
PSO675G4346 Papaver somniferum HOM05D001705 ORTHO05D010003 5.3e-06 57.0 140 70.7
Sabra07G0000900 Salix brachista HOM05D004203 ORTHO05D004830 5.3e-06 57.0 50 52.0
Cc07_g10880 Coffea canephora HOM05D003705 ORTHO05D010003 9.0e-06 56.2 50 58.0


User provided reference genes

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