Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g028770 Solanum pennellii HOM05D007514 ORTHO05D009469 3.2e-68 261.9 161 100.0
PGSC0003DMG401003636 Solanum tuberosum HOM05D007514 ORTHO05D009469 3.3e-65 251.9 164 78.0
Nitab4.5_0001959g0010 Nicotiana tabacum HOM05D007514 ORTHO05D009469 3.0e-50 202.2 181 62.4
Peaxi162Scf00083g00065 Petunia axillaris HOM05D007514 ORTHO05D009469 3.9e-42 175.3 171 66.7
Nitab4.5_0006286g0070 Nicotiana tabacum HOM05D007514 ORTHO05D009469 4.5e-38 161.8 86 87.2
CAN.G66.6 Capsicum annuum HOM05D007514 ORTHO05D009469 3.3e-33 145.6 84 82.1
QL06p032616 Quercus lobata HOM05D007514 ORTHO05D009469 1.0e-29 134.0 81 80.2
Oeu059507.1 Olea europaea HOM05D007514 ORTHO05D009469 5.0e-29 131.7 71 87.3
Duzib264G0291 Durio zibethinus HOM05D007514 ORTHO05D009469 1.9e-28 129.8 83 77.1
Cpa.g.sc6.242 Carica papaya HOM05D007514 ORTHO05D009469 2.5e-28 129.4 81 72.8
Ah.01g021120 Amaranthus hybridus HOM05D007514 ORTHO05D009469 4.2e-28 128.6 71 81.7
MSTRG.883 Avicennia marina HOM05D007514 ORTHO05D009469 5.5e-28 128.3 81 74.1
Cc07_g10640 Coffea canephora HOM05D007514 ORTHO05D009469 5.5e-28 128.3 71 83.1
Gohir.A02G170200 Gossypium hirsutum HOM05D007514 ORTHO05D009469 5.5e-28 128.3 80 75.0
Hma1.2p1_0743F.1_g211610 Hydrangea macrophylla HOM05D007514 ORTHO05D009469 7.2e-28 127.9 72 83.3
Manes.02G103801 Manihot esculenta HOM05D007514 ORTHO05D009469 9.3e-28 127.5 73 78.1
TWI09G1362 Tripterygium wilfordii HOM05D007514 ORTHO05D009469 1.2e-27 127.1 82 74.4
Nn6g32368 Nelumbo nucifera HOM05D007514 ORTHO05D009469 1.6e-27 126.7 77 76.6
Thecc.01G019700 Theobroma cacao HOM05D007514 ORTHO05D009469 1.6e-27 126.7 87 67.8
Gorai.003G010100 Gossypium raimondii HOM05D007514 ORTHO05D009469 2.7e-27 125.9 80 73.8
MBI05_g15346_MAGBIO Magnolia biondii HOM05D007514 ORTHO05D009469 4.6e-27 125.2 76 76.3
SGA_v2.0_scaffold234G43648 Striga asiatica HOM05D007514 ORTHO05D009469 4.6e-27 125.2 71 81.7
DCAR_016611 Daucus carota HOM05D007514 ORTHO05D009469 6.1e-27 124.8 85 68.2
EL10Ac9g21968 Beta vulgaris HOM05D007514 ORTHO05D009469 7.9e-27 124.4 71 80.3
Glyma.02G048800 Glycine max HOM05D007514 ORTHO05D009469 7.9e-27 124.4 82 70.7
Migut.L00252 Erythranthe guttata HOM05D007514 ORTHO05D009469 1.0e-26 124.0 75 78.7
Migut.L00394 Erythranthe guttata HOM05D007514 ORTHO05D009469 1.0e-26 124.0 75 78.7
Gohir.D03G009800 Gossypium hirsutum HOM05D007514 ORTHO05D009469 1.0e-26 124.0 80 72.5
VMungo0251G0111 Vigna mungo HOM05D007514 ORTHO05D009469 1.0e-26 124.0 71 81.7
Ca_22373_v3 Cicer arietinum L. HOM05D007514 ORTHO05D009469 1.3e-26 123.6 84 71.4
Lsat_1_v5_gn_3_74241 Lactuca sativa HOM05D007514 ORTHO05D009469 1.3e-26 123.6 84 70.2
unitig_26.g10012 Utricularia gibba HOM05D007514 ORTHO05D009469 1.8e-26 123.2 81 71.6
Lj4g0013490 Lotus japonicus HOM05D007514 ORTHO05D009469 2.3e-26 122.9 72 80.6
COL.COLO4_21918 Corchorus olitorius HOM05D007514 ORTHO05D009469 3.0e-26 122.5 74 75.7
Lalb_Chr05g0229901 Lupinus albus HOM05D007514 ORTHO05D009469 3.0e-26 122.5 84 69.0
Carub.0003s3210 Capsella rubella HOM05D007514 ORTHO05D009469 3.9e-26 122.1 86 67.4
CiPaw.07G058000 Carya illinoinensis HOM05D007514 ORTHO05D009469 5.1e-26 121.7 73 76.7
Potri.005G115000 Populus trichocarpa HOM05D007514 ORTHO05D009469 5.1e-26 121.7 72 77.8
PGR119G2084 Punica granatum HOM05D007514 ORTHO05D009469 6.7e-26 121.3 71 78.9
AL3G51000 Arabidopsis lyrata HOM05D007514 ORTHO05D009469 1.1e-25 120.6 81 70.4
Cfa006967 Carpinus fangiana HOM05D007514 ORTHO05D009469 1.1e-25 120.6 73 76.7
Aqoxy5G01772 Aquilegia oxysepala HOM05D007514 ORTHO05D009469 1.5e-25 120.2 85 64.7
Haze_03771 Corylus avellana HOM05D007514 ORTHO05D009469 1.5e-25 120.2 73 76.7
AUR62011597 Chenopodium quinoa HOM05D007514 ORTHO05D009469 2.5e-25 119.4 70 78.6
Dinv33625 Davidia involucrata HOM05D007514 ORTHO05D009469 2.5e-25 119.4 72 76.4
Glyma.16G128900 Glycine max HOM05D007514 ORTHO05D009469 2.5e-25 119.4 85 68.2
Sabra05G0094100 Salix brachista HOM05D007514 ORTHO05D009469 2.5e-25 119.4 72 76.4
AT2G17972 Arabidopsis thaliana HOM05D007514 ORTHO05D009469 3.3e-25 119.0 81 69.1
ClCG01G020240 Citrullus lanatus HOM05D007514 ORTHO05D009469 3.3e-25 119.0 71 76.1
Lj2P467T19 Lonicera japonica HOM05D007514 ORTHO05D009469 3.3e-25 119.0 75 70.7
MELO3C007896.2 Cucumis melo HOM05D007514 ORTHO05D009469 4.3e-25 118.6 71 76.1
Prupe.7G167500 Prunus persica HOM05D007514 ORTHO05D009469 5.7e-25 118.2 77 70.1
THA.LOC104819752 Tarenaya hassleriana HOM05D007514 ORTHO05D009469 5.7e-25 118.2 70 77.1
Phvul.003G262200 Phaseolus vulgaris HOM05D007514 ORTHO05D009469 7.4e-25 117.9 71 77.5
Thhalv10022884m.g Eutrema salsugineum HOM05D007514 ORTHO05D009469 9.7e-25 117.5 81 69.1
PSO541G1849 Papaver somniferum HOM05D007514 ORTHO05D009469 9.7e-25 117.5 75 70.7
A07p02710 Brassica napus HOM05D007514 ORTHO05D009469 1.3e-24 117.1 81 71.6
BraA07t28071Z Brassica rapa HOM05D007514 ORTHO05D009469 1.3e-24 117.1 81 71.6
BcaC06g36349 Brassica carinata HOM05D007514 ORTHO05D009469 2.2e-24 116.3 74 74.3
C07p05010 Brassica napus HOM05D007514 ORTHO05D009469 2.2e-24 116.3 74 74.3
BolC7t40902H Brassica oleracea HOM05D007514 ORTHO05D009469 2.2e-24 116.3 74 74.3
CARHR108460 Cardamine hirsuta HOM05D007514 ORTHO05D009469 2.2e-24 116.3 74 74.3
Rhsim08G0034000 Rhododendron simsii HOM05D007514 ORTHO05D009469 2.2e-24 116.3 75 70.7
Sp3g31390 Schrenkiella parvula HOM05D007514 ORTHO05D009469 2.2e-24 116.3 81 70.4
Ciclev10026620m.g Citrus clementina HOM05D007514 ORTHO05D009469 2.8e-24 115.9 72 73.6
CsaV3_6G047030 Cucumis sativus L. HOM05D007514 ORTHO05D009469 2.8e-24 115.9 71 73.2
PSO675G8043 Papaver somniferum HOM05D007514 ORTHO05D009469 2.8e-24 115.9 75 69.3
Aa31LG8G15140 Aethionema arabicum HOM05D007514 ORTHO05D009469 3.7e-24 115.5 74 73.0
Sc16g0002120 Simmondsia chinensis HOM05D007514 ORTHO05D009469 3.7e-24 115.5 84 60.7
BcaB03g16581 Brassica carinata HOM05D007514 ORTHO05D009469 4.8e-24 115.2 70 75.7
CSS0010041 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 4.8e-24 115.2 69 76.8
CSS0030936 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 4.8e-24 115.2 69 76.8
Atru.chr3.793 Acer truncatum HOM05D007514 ORTHO05D009469 6.3e-24 114.8 71 76.1
MD02G1133200 Malus domestica HOM05D007514 ORTHO05D009469 6.3e-24 114.8 72 75.0
Medtr8g075960 Medicago truncatula HOM05D007514 ORTHO05D009469 6.3e-24 114.8 80 68.8
arahy.Tifrunner.gnm1.ann1.EYR4CZ Arachis hypogaea HOM05D007514 ORTHO05D009469 1.4e-23 113.6 73 72.6
arahy.Tifrunner.gnm1.ann1.JXSY0Y Arachis hypogaea HOM05D007514 ORTHO05D009469 1.4e-23 113.6 73 72.6
CANSAT01G2848 Cannabis sativa HOM05D007514 ORTHO05D009469 1.4e-23 113.6 74 71.6
Psat4g099040 Pisum sativum HOM05D007514 ORTHO05D009469 1.4e-23 113.6 83 63.9
Sed0026037 Sechium edule HOM05D007514 ORTHO05D009469 1.8e-23 113.2 70 74.3
Os06g0715200 Oryza sativa ssp. japonica HOM05D007514 ORTHO05D009469 3.1e-23 112.5 71 73.2
FvH4_1g11940 Fragaria vesca HOM05D007514 ORTHO05D009469 4.1e-23 112.1 72 69.4
FAN19G0235 Fragaria x ananassa HOM05D007514 ORTHO05D009469 4.1e-23 112.1 72 69.4
FAN23G2896 Fragaria x ananassa HOM05D007514 ORTHO05D009469 4.1e-23 112.1 72 69.4
FAN26G2491 Fragaria x ananassa HOM05D007514 ORTHO05D009469 4.1e-23 112.1 72 69.4
Zm00001eb228020 Zea mays HOM05D007514 ORTHO05D009469 6.9e-23 111.3 76 68.4
TPR.G30050 Trifolium pratense HOM05D007514 ORTHO05D009469 9.1e-23 110.9 72 72.2
TAR365G0263 Trochodendron aralioides HOM05D007514 ORTHO05D009469 2.0e-22 109.8 60 81.7
SMO353G0320 Selaginella moellendorffii HOM05D007514 ORTHO05D009469 7.7e-22 107.8 73 67.1
TAR365G1204 Trochodendron aralioides HOM05D007514 ORTHO05D009469 1.0e-21 107.5 60 80.0
Pp3c15_14110 Physcomitrium patens HOM05D007514 ORTHO05D009469 5.0e-21 105.1 82 61.0
HPP92_025365 Vanilla planifolia HOM05D007514 ORTHO05D009469 6.5e-21 104.8 71 64.8
SEGI_16775 Sequoiadendron giganteum HOM05D007514 ORTHO05D009469 6.1e-19 98.2 58 75.9
arahy.Tifrunner.gnm1.ann1.KXHU4R Arachis hypogaea HOM05D007514 ORTHO05D009469 2.3e-18 96.3 66 72.7
Duzib147G0981 Durio zibethinus HOM05D007514 ORTHO05D009469 3.9e-18 95.5 74 62.2
AagrBONN_evm.TU.Sc2ySwM_344.4071 Anthoceros agrestis HOM05D007514 ORTHO05D009469 3.3e-17 92.4 71 59.2
Mapoly0011s0103 Marchantia polymorpha HOM05D007514 ORTHO05D009469 4.4e-17 92.0 67 62.7
FAN28G1094 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.4e-15 87.0 49 75.5
Cre05.g245102 Chlamydomonas reinhardtii HOM05D007514 ORTHO05D009469 2.0e-14 83.2 57 61.4
PRCOL_00005620 Prasinoderma coloniale HOM05D007514 ORTHO05D009469 9.1e-07 57.8 69 42.0
MCO09G231 Micromonas commoda HOM05D007514 ORTHO05D009469 5.9e-06 55.1 57 40.4


User provided reference genes

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