Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 9.7e-110 400.2 208 100.0
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 2.6e-107 392.1 208 98.6
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 4.1e-100 368.2 208 93.8
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 2.2e-93 345.9 214 86.0
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 1.1e-92 343.6 208 87.0
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 4.4e-86 321.6 218 80.7
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 2.5e-73 279.3 221 69.2
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 9.4e-73 277.3 213 71.4
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 4.7e-72 275.0 149 92.6
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 4.7e-72 275.0 214 68.2
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 6.1e-72 274.6 220 69.1
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 3.0e-71 272.3 218 68.3
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 1.5e-70 270.0 216 68.1
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 2.0e-70 269.6 211 70.6
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 5.7e-70 268.1 214 68.2
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 7.5e-70 267.7 210 68.6
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 7.5e-70 267.7 210 68.6
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 9.8e-70 267.3 217 71.0
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 2.2e-69 266.2 217 68.2
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 4.8e-69 265.0 171 77.8
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 4.8e-69 265.0 217 67.3
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 6.3e-69 264.6 208 69.2
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 8.3e-69 264.2 210 68.6
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 1.1e-68 263.8 218 66.1
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 1.4e-68 263.5 233 64.8
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 1.8e-68 263.1 216 68.5
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 1.8e-68 263.1 210 68.1
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 3.1e-68 262.3 211 67.3
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 4.1e-68 261.9 213 66.2
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 9.1e-68 260.8 198 69.7
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 2.0e-67 259.6 215 69.3
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 2.0e-67 259.6 216 67.1
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 3.5e-67 258.8 217 65.9
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.7e-66 256.5 214 67.8
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 6.6e-66 254.6 208 65.9
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 1.1e-65 253.8 209 65.6
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 1.5e-65 253.4 213 66.7
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 1.9e-65 253.1 219 64.8
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 1.9e-65 253.1 216 64.4
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 3.3e-65 252.3 147 85.0
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 4.2e-65 251.9 213 62.9
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 4.2e-65 251.9 217 63.6
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 4.2e-65 251.9 210 65.2
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 2.1e-64 249.6 210 63.3
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 2.1e-64 249.6 147 83.7
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 2.8e-64 249.2 233 62.7
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 4.7e-64 248.4 228 60.1
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 6.1e-64 248.1 187 72.2
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 6.1e-64 248.1 225 61.8
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 1.4e-63 246.9 211 62.1
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 2.3e-63 246.1 213 65.3
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 3.0e-63 245.7 214 64.0
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 4.0e-63 245.4 155 78.1
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 5.2e-63 245.0 156 76.3
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 6.8e-63 244.6 219 62.1
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 8.9e-63 244.2 218 63.3
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 1.2e-62 243.8 150 80.0
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 3.4e-62 242.3 217 62.7
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 4.4e-62 241.9 214 61.7
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 7.5e-62 241.1 208 64.9
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 9.8e-62 240.7 211 62.1
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.3e-61 240.4 219 64.8
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.7e-61 240.0 223 62.8
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 6.3e-61 238.0 210 63.3
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 1.1e-60 237.3 214 61.2
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 1.1e-60 237.3 180 67.8
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 1.4e-60 236.9 187 65.8
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 2.4e-60 236.1 157 72.6
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 7.0e-60 234.6 211 61.6
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 2.0e-59 233.0 153 72.5
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 7.8e-59 231.1 210 62.4
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.3e-58 230.3 205 64.4
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 1.3e-58 230.3 189 64.0
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 1.7e-58 229.9 147 76.2
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 2.9e-58 229.2 210 61.4
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 5.0e-58 228.4 214 60.3
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 6.6e-58 228.0 180 65.6
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 8.6e-58 227.6 195 67.7
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 2.5e-57 226.1 151 76.8
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 1.2e-56 223.8 152 71.7
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.6e-56 223.4 211 61.6
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 2.8e-56 222.6 151 72.2
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 3.6e-56 222.2 211 57.8
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 1.0e-55 220.7 182 64.3
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 1.0e-55 220.7 182 64.3
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 1.0e-55 220.7 222 55.0
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 3.1e-55 219.2 189 66.7
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 1.2e-54 217.2 201 59.2
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 1.5e-54 216.9 128 80.5
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 3.4e-54 215.7 215 57.2
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 5.8e-54 214.9 215 58.6
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 2.2e-53 213.0 186 60.2
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 3.7e-53 212.2 218 58.7
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 7.0e-52 208.0 227 53.3
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 9.2e-52 207.6 153 65.4
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 3.5e-51 205.7 168 56.5
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 6.0e-51 204.9 235 55.3
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 2.3e-50 203.0 151 62.9
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 6.8e-47 191.4 108 87.0
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 3.4e-46 189.1 109 83.5
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 1.3e-45 187.2 147 61.9
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 2.2e-45 186.4 173 62.4
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 1.1e-41 174.1 110 78.2
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 8.3e-37 157.9 150 61.3
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 2.5e-33 146.4 145 59.3
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 7.3e-33 144.8 159 54.7
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 3.6e-32 142.5 96 70.8
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 3.1e-31 139.4 149 55.0
Dinv08559 Davidia involucrata HOM05D006610 ORTHO05D008447 3.4e-30 136.0 72 87.5
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 3.8e-29 132.5 165 51.5
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 6.4e-29 131.7 147 48.3
BcaC07g37739 Brassica carinata HOM05D006610 ORTHO05D008447 3.4e-22 109.4 68 75.0
BolC8t48119H Brassica oleracea HOM05D006610 ORTHO05D008447 3.4e-22 109.4 68 75.0
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 3.0e-18 96.3 52 92.3
vmacro18432 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 7.3e-17 91.7 58 75.9
QL06p051391 Quercus lobata HOM05D006610 ORTHO05D008447 1.1e-15 87.8 100 54.0
HPP92_025903 Vanilla planifolia HOM05D006610 ORTHO05D008447 5.8e-06 55.5 38 68.4


User provided reference genes

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