Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g028230 Solanum pennellii HOM05D007821 ORTHO05D009897 7.1e-65 250.4 120 100.0
Solyc02g083440.3 Solanum lycopersicum HOM05D007821 ORTHO05D009897 1.3e-63 246.1 120 98.3
PGSC0003DMG400003657 Solanum tuberosum HOM05D007821 ORTHO05D009897 1.3e-63 246.1 120 98.3
CAN.G890.37 Capsicum annuum HOM05D007821 ORTHO05D009897 2.5e-54 215.3 120 86.7
Nitab4.5_0006899g0050 Nicotiana tabacum HOM05D007821 ORTHO05D009897 1.3e-53 213.0 127 83.5
Peaxi162Scf00328g00213 Petunia axillaris HOM05D007821 ORTHO05D009897 1.2e-51 206.5 127 80.3
Nitab4.5_0016722g0010 Nicotiana tabacum HOM05D007821 ORTHO05D009897 7.7e-51 203.8 127 81.1
Thecc.01G012400 Theobroma cacao HOM05D007821 ORTHO05D009897 1.7e-34 149.4 127 59.1
Dinv40139 Davidia involucrata HOM05D007821 ORTHO05D009897 5.0e-34 147.9 136 58.1
Duzib147G1309 Durio zibethinus HOM05D007821 ORTHO05D009897 1.1e-33 146.7 135 56.3
Gohir.A11G172200 Gossypium hirsutum HOM05D007821 ORTHO05D009897 7.2e-33 144.1 135 54.8
RcHm_v2.0_Chr2g0098471 Rosa chinensis HOM05D007821 ORTHO05D009897 2.1e-32 142.5 140 56.4
Manes.02G109600 Manihot esculenta HOM05D007821 ORTHO05D009897 3.6e-32 141.7 133 57.1
COL.COLO4_22487 Corchorus olitorius HOM05D007821 ORTHO05D009897 4.7e-32 141.4 137 54.0
Hma1.2p1_0315F.1_g122510 Hydrangea macrophylla HOM05D007821 ORTHO05D009897 6.1e-32 141.0 118 62.7
Gohir.D11G179200 Gossypium hirsutum HOM05D007821 ORTHO05D009897 1.0e-31 140.2 135 54.1
Gorai.007G191100 Gossypium raimondii HOM05D007821 ORTHO05D009897 1.0e-31 140.2 135 54.1
Cc07_g11250 Coffea canephora HOM05D007821 ORTHO05D009897 5.2e-31 137.9 139 53.2
CiPaw.07G062800 Carya illinoinensis HOM05D007821 ORTHO05D009897 6.7e-31 137.5 110 60.9
FvH4_1g11180 Fragaria vesca HOM05D007821 ORTHO05D009897 1.1e-30 136.7 140 54.3
FAN19G2165 Fragaria x ananassa HOM05D007821 ORTHO05D009897 1.1e-30 136.7 140 54.3
FAN28G2391 Fragaria x ananassa HOM05D007821 ORTHO05D009897 1.1e-30 136.7 140 54.3
Potri.005G108633 Populus trichocarpa HOM05D007821 ORTHO05D009897 3.3e-30 135.2 133 54.9
QL06p051907 Quercus lobata HOM05D007821 ORTHO05D009897 9.7e-30 133.7 133 54.1
Sabra05G0089000 Salix brachista HOM05D006929 ORTHO05D008646 1.3e-29 133.3 133 54.1
DCAR_011577 Daucus carota HOM05D007821 ORTHO05D009897 1.7e-29 132.9 110 61.8
Cfa007023 Carpinus fangiana HOM05D007821 ORTHO05D009897 8.2e-29 130.6 130 52.3
Prupe.7G174100 Prunus persica HOM05D007821 ORTHO05D009897 8.2e-29 130.6 108 63.0
FAN23G1973 Fragaria x ananassa HOM05D007821 ORTHO05D009897 1.4e-28 129.8 140 52.9
TWI73G0676 Tripterygium wilfordii HOM05D007821 ORTHO05D009897 1.8e-28 129.4 104 64.4
Gohir.A10G099000 Gossypium hirsutum HOM05D007821 ORTHO05D009897 3.1e-28 128.6 133 51.1
MD02G1124300 Malus domestica HOM05D007821 ORTHO05D009897 4.1e-28 128.3 111 59.5
TAR376G1238 Trochodendron aralioides HOM05D007821 ORTHO05D009897 5.3e-28 127.9 124 50.8
MD15G1238300 Malus domestica HOM05D007821 ORTHO05D009897 9.1e-28 127.1 111 59.5
Actinidia35672 Actinidia chinensis HOM05D007821 ORTHO05D009897 1.2e-27 126.7 109 60.6
Oeu039727.1 Olea europaea HOM05D007821 ORTHO05D009897 2.6e-27 125.6 138 52.2
Gohir.D10G089100 Gossypium hirsutum HOM05D007821 ORTHO05D009897 3.5e-27 125.2 133 49.6
Gorai.011G098000 Gossypium raimondii HOM05D007821 ORTHO05D009897 3.5e-27 125.2 133 49.6
Lj4g0018241 Lotus japonicus HOM05D007821 ORTHO05D009897 3.5e-27 125.2 135 50.4
Ciclev10026734m.g Citrus clementina HOM05D007821 ORTHO05D009897 1.3e-26 123.2 112 56.2
Nn5g30827 Nelumbo nucifera HOM05D007821 ORTHO05D009897 1.7e-26 122.9 133 49.6
Phvul.003G266700 Phaseolus vulgaris HOM05D007821 ORTHO05D009897 3.8e-26 121.7 128 48.4
arahy.Tifrunner.gnm1.ann1.B80PS6 Arachis hypogaea HOM05D007821 ORTHO05D009897 5.0e-26 121.3 107 54.2
Oeu012560.1 Olea europaea HOM05D007821 ORTHO05D009897 6.5e-26 120.9 112 58.0
Glyma.16G122400 Glycine max HOM05D007821 ORTHO05D009897 2.5e-25 119.0 126 49.2
VMungo0251G0901 Vigna mungo HOM05D007821 ORTHO05D009897 2.5e-25 119.0 106 54.7
Glyma.02G044900 Glycine max HOM05D007821 ORTHO05D009897 3.2e-25 118.6 126 49.2
Aqoxy6G02053 Aquilegia oxysepala HOM05D007821 ORTHO05D009897 7.2e-25 117.5 112 51.8
CsaV3_6G047470 Cucumis sativus L. HOM05D007821 ORTHO05D009897 2.1e-24 115.9 138 47.8
PGR119G1098 Punica granatum HOM05D007821 ORTHO05D009897 2.7e-24 115.5 101 55.4
Psat4g102440 Pisum sativum HOM05D007821 ORTHO05D009897 4.7e-24 114.8 133 46.6
PSO675G1463 Papaver somniferum HOM05D007821 ORTHO05D009897 8.0e-24 114.0 113 52.2
MELO3C033032.2 Cucumis melo HOM05D007821 ORTHO05D009897 1.5e-22 109.8 138 45.7
Medtr8g075000 Medicago truncatula HOM05D007821 ORTHO05D009897 5.7e-22 107.8 126 47.6
Medtr8g075080 Medicago truncatula HOM05D007821 ORTHO05D009897 2.8e-21 105.5 126 46.8
CANSAT01G0454 Cannabis sativa HOM05D007821 ORTHO05D009897 8.3e-21 104.0 145 45.5
arahy.Tifrunner.gnm1.ann1.F8FFU1 Arachis hypogaea HOM05D007821 ORTHO05D009897 1.8e-20 102.8 107 50.5
GSVIVG01006893001 Vitis vinifera HOM05D007821 ORTHO05D009897 1.8e-20 102.8 94 55.3
PSO541G0785 Papaver somniferum HOM05D007821 ORTHO05D009897 4.5e-19 98.2 113 48.7
Sed0025726 Sechium edule HOM05D007821 ORTHO05D009897 1.0e-18 97.1 116 47.4
TPR.G19477 Trifolium pratense HOM05D006929 ORTHO05D008646 6.5e-18 94.4 159 36.5
Eucgr.I02312 Eucalyptus grandis HOM05D007821 ORTHO05D009897 8.5e-18 94.0 111 46.8
Lalb_Chr09g0334261 Lupinus albus HOM05D007821 ORTHO05D009897 2.5e-17 92.4 78 57.7
EL10Ac6g13327 Beta vulgaris HOM05D007821 ORTHO05D009897 4.2e-17 91.7 94 52.1
AUR62026232 Chenopodium quinoa HOM05D007821 ORTHO05D009897 2.1e-16 89.4 94 53.2
AUR62026417 Chenopodium quinoa HOM05D007821 ORTHO05D009897 8.0e-16 87.4 93 49.5
Atru.chr3.889 Acer truncatum HOM05D007821 ORTHO05D009897 2.3e-15 85.9 99 44.4
Atru.chr3.899 Acer truncatum HOM05D007821 ORTHO05D009897 2.3e-15 85.9 99 44.4
FAN26G1107 Fragaria x ananassa HOM05D007821 ORTHO05D009897 2.0e-14 82.8 105 46.7
Aa31sc1371G20 Aethionema arabicum HOM05D007821 ORTHO05D009897 1.4e-12 76.6 100 42.0
ECA246G2630 Erigeron canadensis HOM05D007821 ORTHO05D009897 3.1e-12 75.5 116 42.2
Sp5g10860 Schrenkiella parvula HOM05D007821 ORTHO05D009897 3.1e-12 75.5 92 43.5
HanXRQChr15g0484781 Helianthus annuus HOM05D007821 ORTHO05D009897 2.0e-11 72.8 136 38.2
C08p26640 Brassica napus HOM05D007821 ORTHO05D009897 4.5e-11 71.6 92 41.3
A01p23500 Brassica napus HOM05D007821 ORTHO05D009897 5.9e-11 71.2 96 38.5
BraA01t02257Z Brassica rapa HOM05D007821 ORTHO05D009897 5.9e-11 71.2 96 38.5
BolC8t50278H Brassica oleracea HOM05D007821 ORTHO05D009897 7.7e-11 70.9 84 44.0
Carub.0005s1774 Capsella rubella HOM05D007821 ORTHO05D009897 7.7e-11 70.9 91 39.6
A09p44430 Brassica napus HOM05D007821 ORTHO05D009897 1.3e-10 70.1 84 42.9
BraA09t39902Z Brassica rapa HOM05D007821 ORTHO05D009897 1.3e-10 70.1 84 42.9
C01p29170 Brassica napus HOM05D007821 ORTHO05D009897 2.3e-10 69.3 78 46.2
C07p46290 Brassica napus HOM05D007821 ORTHO05D009897 5.0e-10 68.2 81 42.0
AL5G31800 Arabidopsis lyrata HOM05D007821 ORTHO05D009897 6.6e-10 67.8 109 36.7
BolC1t02847H Brassica oleracea HOM05D007821 ORTHO05D009897 6.6e-10 67.8 78 46.2
SEGI_40728 Sequoiadendron giganteum HOM05D001188 ORTHO05D001032 6.6e-10 67.8 105 41.0
Lsat_1_v5_gn_3_59100 Lactuca sativa HOM05D001188 ORTHO05D001032 5.2e-07 58.2 126 31.0
Glyma.19G047100 Glycine max HOM05D001188 ORTHO05D001032 1.2e-06 57.0 93 38.7
CAN.G610.80 Capsicum annuum HOM05D001188 ORTHO05D001032 4.4e-06 55.1 119 31.9
Nitab4.5_0009855g0030 Nicotiana tabacum HOM05D001188 ORTHO05D001032 4.4e-06 55.1 92 39.1
SEGI_37570 Sequoiadendron giganteum HOM05D001188 ORTHO05D001032 4.4e-06 55.1 101 34.7
SGA_v2.0_scaffold36G14537 Striga asiatica HOM05D001188 ORTHO05D001032 4.4e-06 55.1 86 37.2
SalBow8G0834 Salvia bowleyana HOM05D001188 ORTHO05D001032 5.7e-06 54.7 86 39.5
Mapoly0047s0036 Marchantia polymorpha HOM05D001188 ORTHO05D001032 7.5e-06 54.3 92 37.0
Psat1g080520 Pisum sativum HOM05D001188 ORTHO05D001032 7.5e-06 54.3 123 32.5
Sabra15G0074500 Salix brachista HOM05D001188 ORTHO05D001032 7.5e-06 54.3 95 41.1
arahy.Tifrunner.gnm1.ann1.Z3Y2S3 Arachis hypogaea HOM05D001188 ORTHO05D001032 9.8e-06 53.9 96 35.4
Sabra15G0070500 Salix brachista HOM05D001188 ORTHO05D001032 9.8e-06 53.9 94 41.5
Sabra15G0073800 Salix brachista HOM05D001188 ORTHO05D001032 9.8e-06 53.9 94 40.4


User provided reference genes

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