Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g028160 Solanum pennellii HOM05D003374 ORTHO05D009470 1.1e-87 326.6 168 100.0
PGSC0003DMG400003663 Solanum tuberosum HOM05D003374 ORTHO05D009470 4.0e-82 308.1 168 94.6
CAN.G890.28 Capsicum annuum HOM05D003374 ORTHO05D009470 6.0e-70 267.7 168 85.1
Nitab4.5_0006892g0010 Nicotiana tabacum HOM05D003374 ORTHO05D009470 1.2e-65 253.4 173 75.1
Nitab4.5_0002105g0080 Nicotiana tabacum HOM05D003374 ORTHO05D009470 1.3e-64 250.0 173 76.9
Peaxi162Scf00328g00118 Petunia axillaris HOM05D003374 ORTHO05D009470 9.4e-55 217.2 175 73.1
Solyc02g083380.3 Solanum lycopersicum HOM05D003374 ORTHO05D009470 1.5e-36 156.8 73 100.0
Cc07_g11310 Coffea canephora HOM05D003374 ORTHO05D009470 1.3e-35 153.7 137 56.9
Cc08_g04880 Coffea canephora HOM05D003374 ORTHO05D009470 1.3e-35 153.7 137 56.9
Hma1.2p1_0315F.1_g122600 Hydrangea macrophylla HOM05D003374 ORTHO05D009470 2.0e-33 146.4 135 61.5
CSS0026426 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 5.9e-33 144.8 178 53.4
Dinv08548 Davidia involucrata HOM05D003374 ORTHO05D009470 5.9e-33 144.8 141 58.9
Potri.005G107800 Populus trichocarpa HOM05D003374 ORTHO05D009470 3.8e-32 142.1 160 55.6
QL06p052079 Quercus lobata HOM05D003374 ORTHO05D009470 5.0e-32 141.7 171 54.4
Ciclev10026638m.g Citrus clementina HOM05D003374 ORTHO05D009470 6.5e-32 141.4 172 51.7
Thecc.01G011500 Theobroma cacao HOM05D003374 ORTHO05D009470 1.5e-31 140.2 172 53.5
TAR625G1139 Trochodendron aralioides HOM05D003374 ORTHO05D009470 4.2e-31 138.7 170 51.8
Duzib145G0002 Durio zibethinus HOM05D003374 ORTHO05D009470 2.7e-30 136.0 161 52.8
Manes.02G110400 Manihot esculenta HOM05D003374 ORTHO05D009470 4.7e-30 135.2 171 51.5
Cfa007029 Carpinus fangiana HOM05D003374 ORTHO05D009470 8.0e-30 134.4 174 51.1
Atru.chr3.907 Acer truncatum HOM05D003374 ORTHO05D009470 1.4e-29 133.7 172 51.7
CiPaw.08G125800 Carya illinoinensis HOM05D003374 ORTHO05D009470 3.0e-29 132.5 175 52.0
Sabra05G0088300 Salix brachista HOM05D003374 ORTHO05D009470 3.0e-29 132.5 137 54.7
Eucgr.I02305 Eucalyptus grandis HOM05D003374 ORTHO05D009470 1.2e-28 130.6 145 53.1
Rhsim10G0205800 Rhododendron simsii HOM05D003374 ORTHO05D009470 1.5e-28 130.2 138 55.1
vmacro20496 Vaccinium macrocarpon HOM05D003374 ORTHO05D009470 2.0e-28 129.8 175 50.3
Gohir.D03G005500 Gossypium hirsutum HOM05D003374 ORTHO05D009470 2.6e-28 129.4 138 54.3
Gorai.003G005900 Gossypium raimondii HOM05D003374 ORTHO05D009470 2.6e-28 129.4 138 54.3
TWI73G0454 Tripterygium wilfordii HOM05D003374 ORTHO05D009470 3.4e-28 129.0 175 48.0
Haze_03703 Corylus avellana HOM05D003374 ORTHO05D009415 4.4e-28 128.6 175 50.3
Phvul.002G104800 Phaseolus vulgaris HOM05D003374 ORTHO05D009470 5.7e-28 128.3 177 48.6
PSO675G4674 Papaver somniferum HOM05D003374 ORTHO05D009470 9.8e-28 127.5 136 52.9
CANSAT01G1253 Cannabis sativa HOM05D003374 ORTHO05D009470 1.7e-27 126.7 143 50.3
PSO541G4788 Papaver somniferum HOM05D003374 ORTHO05D009470 6.3e-27 124.8 136 52.2
FAN26G1101 Fragaria x ananassa HOM05D003374 ORTHO05D009470 8.3e-27 124.4 143 52.4
RcHm_v2.0_Chr2g0098351 Rosa chinensis HOM05D003374 ORTHO05D009470 8.3e-27 124.4 171 47.4
FAN23G1041 Fragaria x ananassa HOM05D003374 ORTHO05D009470 1.4e-26 123.6 140 51.4
FAN28G2426 Fragaria x ananassa HOM05D003374 ORTHO05D009470 1.4e-26 123.6 140 51.4
MD15G1237400 Malus domestica HOM05D003374 ORTHO05D009470 1.8e-26 123.2 137 53.3
Gohir.A02G174300 Gossypium hirsutum HOM05D003374 ORTHO05D009470 2.4e-26 122.9 174 48.3
Prupe.7G175000 Prunus persica HOM05D003374 ORTHO05D009470 3.1e-26 122.5 166 48.8
VMungo1215G1047 Vigna mungo HOM05D003374 ORTHO05D009470 4.1e-26 122.1 127 54.3
Lj2g0014457 Lotus japonicus HOM05D003374 ORTHO05D009470 7.0e-26 121.3 132 55.3
Cpa.g.sc6.313 Carica papaya HOM05D003374 ORTHO05D009470 9.1e-26 120.9 179 44.1
Medtr5g022970 Medicago truncatula HOM05D003374 ORTHO05D009470 9.1e-26 120.9 179 48.0
Glyma.11G080800 Glycine max HOM05D003374 ORTHO05D009470 1.6e-25 120.2 140 52.1
Oeu022073.1 Olea europaea HOM05D003374 ORTHO05D009470 2.0e-25 119.8 153 48.4
PGR102G2171 Punica granatum HOM05D003374 ORTHO05D009470 2.0e-25 119.8 130 50.8
MSTRG.22233 Avicennia marina HOM05D003374 ORTHO05D009470 2.7e-25 119.4 123 53.7
Ca_24942_v3 Cicer arietinum L. HOM05D003374 ORTHO05D009470 2.7e-25 119.4 182 45.1
Lalb_Chr09g0321441 Lupinus albus HOM05D003374 ORTHO05D009470 2.7e-25 119.4 163 48.5
MBI09_g46000_MAGBIO Magnolia biondii HOM05D003374 ORTHO05D009470 4.5e-25 118.6 162 49.4
FvH4_1g11080 Fragaria vesca HOM05D003374 ORTHO05D009470 5.9e-25 118.2 171 48.5
CDE05G2149 Ceratophyllum demersum HOM05D003374 ORTHO05D009470 1.0e-24 117.5 131 50.4
Glyma.01G162500 Glycine max HOM05D003374 ORTHO05D009470 6.5e-24 114.8 137 48.9
Lalb_Chr05g0212181 Lupinus albus HOM05D003374 ORTHO05D009470 6.5e-24 114.8 178 44.9
MSTRG.24362 Avicennia marina HOM05D003374 ORTHO05D009470 9.4e-23 110.9 130 50.0
EL10Ac9g21336 Beta vulgaris HOM05D003374 ORTHO05D009470 9.4e-23 110.9 121 52.9
CDE05G3297 Ceratophyllum demersum HOM05D003374 ORTHO05D009470 1.6e-22 110.2 131 48.1
Carub.0003s3182 Capsella rubella HOM05D003374 ORTHO05D009470 2.7e-22 109.4 138 46.4
Duzib147G0965 Durio zibethinus HOM05D003374 ORTHO05D009470 6.1e-22 108.2 129 54.3
THA.LOC104819731 Tarenaya hassleriana HOM05D003374 ORTHO05D009470 6.1e-22 108.2 140 44.3
AT2G17710 Arabidopsis thaliana HOM05D003374 ORTHO05D009470 8.0e-22 107.8 166 42.2
Potri.005G107900 Populus trichocarpa HOM05D003374 ORTHO05D009470 1.4e-21 107.1 111 53.2
CARHR108000 Cardamine hirsuta HOM05D003374 ORTHO05D009470 2.3e-21 106.3 138 45.7
Sp3g31120 Schrenkiella parvula HOM05D003374 ORTHO05D009470 2.3e-21 106.3 138 45.7
C07p05580 Brassica napus HOM05D003374 ORTHO05D009470 3.0e-21 105.9 170 42.4
Aqoxy6G01986 Aquilegia oxysepala HOM05D003374 ORTHO05D009470 4.0e-21 105.5 135 45.2
FAN19G0939 Fragaria x ananassa HOM05D003374 ORTHO05D009470 5.2e-21 105.1 184 44.6
Migut.N02761 Erythranthe guttata HOM05D003374 ORTHO05D009470 8.8e-21 104.4 120 50.0
Aa31LG8G14990 Aethionema arabicum HOM05D003374 ORTHO05D009470 2.0e-20 103.2 133 48.9
AL3G50710 Arabidopsis lyrata HOM05D003374 ORTHO05D009470 2.0e-20 103.2 138 45.7
BcaB03g16544 Brassica carinata HOM05D003374 ORTHO05D009470 2.0e-20 103.2 157 43.3
BcaC06g36303 Brassica carinata HOM05D003374 ORTHO05D009470 2.0e-20 103.2 140 45.0
BraA07t28128Z Brassica rapa HOM05D003374 ORTHO05D009470 2.6e-20 102.8 138 44.2
Thhalv10022897m.g Eutrema salsugineum HOM05D003374 ORTHO05D009470 2.6e-20 102.8 138 43.5
SalBow6G5967 Salvia bowleyana HOM05D003374 ORTHO05D009470 2.6e-20 102.8 106 51.9
SalBow8G5385 Salvia bowleyana HOM05D003374 ORTHO05D009470 2.6e-20 102.8 106 50.9
BcaB08g34755 Brassica carinata HOM05D003374 ORTHO05D009470 5.7e-20 101.7 138 44.9
BcaC01g02894 Brassica carinata HOM05D003374 ORTHO05D009470 5.7e-20 101.7 138 45.7
C03p58640 Brassica napus HOM05D003374 ORTHO05D009470 5.7e-20 101.7 138 45.7
BolC3t18125H Brassica oleracea HOM05D003374 ORTHO05D009470 5.7e-20 101.7 138 45.7
BolC7t40958H Brassica oleracea HOM05D003374 ORTHO05D009415 9.8e-20 100.9 172 41.9
GSVIVG01005193001 Vitis vinifera HOM05D003374 ORTHO05D009470 9.8e-20 100.9 114 53.5
A06p33690 Brassica napus HOM05D003374 ORTHO05D009470 2.2e-19 99.8 138 41.3
BraA06t26303Z Brassica rapa HOM05D003374 ORTHO05D009470 2.2e-19 99.8 138 41.3
Actinidia22937 Actinidia chinensis HOM05D003374 ORTHO05D009470 6.3e-19 98.2 111 51.4
AUR62012999 Chenopodium quinoa HOM05D003374 ORTHO05D009470 1.8e-18 96.7 101 50.5
THA.LOC104804280 Tarenaya hassleriana HOM05D003374 ORTHO05D009470 8.6e-16 87.8 150 38.7
COL.COLO4_22495 Corchorus olitorius HOM05D003374 ORTHO05D009470 4.3e-15 85.5 87 55.2
Hund00012 Selenicereus undatus HOM05D003374 ORTHO05D009470 1.6e-14 83.6 110 48.2
Sc18g0006270 Simmondsia chinensis HOM05D003374 ORTHO05D009470 4.7e-14 82.0 84 57.1
unitig_578.g16135 Utricularia gibba HOM05D003374 ORTHO05D009470 5.2e-13 78.6 97 41.2
TPR.G25136 Trifolium pratense HOM05D000373 ORTHO05D001763 4.4e-12 75.5 102 46.1
TPR.G20269 Trifolium pratense HOM05D003374 ORTHO05D009470 1.1e-10 70.9 92 50.0
arahy.Tifrunner.gnm1.ann1.HG61QK Arachis hypogaea HOM05D003374 ORTHO05D009470 9.2e-10 67.8 98 45.9
arahy.Tifrunner.gnm1.ann1.YP763J Arachis hypogaea HOM05D003374 ORTHO05D009470 9.2e-10 67.8 98 45.9
Ah.01g008140 Amaranthus hybridus HOM05D003374 ORTHO05D009470 1.6e-09 67.0 92 44.6
Actinidia17405 Actinidia chinensis HOM05D000373 ORTHO05D001763 1.7e-08 63.5 64 56.2
Duzib145G0007 Durio zibethinus HOM05D003374 ORTHO05D009470 7.3e-07 58.2 48 58.3
Os04g0560700 Oryza sativa ssp. japonica HOM05D003374 ORTHO05D009470 7.3e-07 58.2 64 48.4
ATR0346G001 Amborella trichopoda HOM05D003374 ORTHO05D009470 9.5e-07 57.8 81 45.7
A07p03300 Brassica napus HOM05D003374 ORTHO05D009415 1.6e-06 57.0 93 38.7
THA.LOC104811375 Tarenaya hassleriana HOM05D004108 ORTHO05D004849 3.6e-06 55.8 111 33.3
AUR62010008 Chenopodium quinoa HOM05D003374 ORTHO05D010386 4.7e-06 55.5 62 48.4


User provided reference genes

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