Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g028140 Solanum pennellii HOM05D003374 ORTHO05D009415 1.4e-71 272.7 127 100.0
Solyc02g083360.1 Solanum lycopersicum HOM05D003374 ORTHO05D009415 9.2e-71 270.0 127 98.4
PGSC0003DMG400003664 Solanum tuberosum HOM05D003374 ORTHO05D009415 1.2e-70 269.6 127 98.4
CAN.G890.27 Capsicum annuum HOM05D003374 ORTHO05D009415 5.0e-69 264.2 127 95.3
Oeu022072.1 Olea europaea HOM05D003374 ORTHO05D009415 4.0e-58 228.0 127 79.5
CiPaw.13G118300 Carya illinoinensis HOM05D003374 ORTHO05D009415 5.2e-58 227.6 127 81.1
COL.COLO4_22496 Corchorus olitorius HOM05D003374 ORTHO05D009415 8.9e-58 226.9 127 80.3
Rhsim10G0205600 Rhododendron simsii HOM05D003374 ORTHO05D009415 2.0e-57 225.7 127 78.7
CsaV3_3G000500 Cucumis sativus L. HOM05D003374 ORTHO05D009415 3.4e-57 224.9 127 79.5
Gorai.003G005800 Gossypium raimondii HOM05D003374 ORTHO05D009415 5.8e-57 224.2 127 78.7
Nn6g31909 Nelumbo nucifera HOM05D003374 ORTHO05D009415 5.8e-57 224.2 126 79.4
TWI73G0214 Tripterygium wilfordii HOM05D003374 ORTHO05D009415 1.3e-56 223.0 125 79.2
CiPaw.08G125700 Carya illinoinensis HOM05D003374 ORTHO05D009415 1.7e-56 222.6 127 79.5
Manes.01G150900 Manihot esculenta HOM05D003374 ORTHO05D009415 1.7e-56 222.6 127 78.7
QL06p052083 Quercus lobata HOM05D003374 ORTHO05D009415 2.2e-56 222.2 124 81.5
Oeu050858.1 Olea europaea HOM05D003374 ORTHO05D009415 2.9e-56 221.9 127 77.2
Duzib147G1310 Durio zibethinus HOM05D003374 ORTHO05D009415 3.8e-56 221.5 127 78.7
Thecc.01G011400 Theobroma cacao HOM05D003374 ORTHO05D009415 3.8e-56 221.5 127 78.0
Gohir.D03G005400 Gossypium hirsutum HOM05D003374 ORTHO05D009415 6.4e-56 220.7 127 77.2
Dinv40145 Davidia involucrata HOM05D003374 ORTHO05D009415 1.4e-55 219.5 113 85.8
Duzib147G0846 Durio zibethinus HOM05D003374 ORTHO05D009415 1.4e-55 219.5 127 78.0
Nitab4.5_0006892g0030 Nicotiana tabacum HOM05D003374 ORTHO05D009415 3.2e-55 218.4 105 92.4
Medtr5g022990 Medicago truncatula HOM05D003374 ORTHO05D009415 4.1e-55 218.0 127 74.0
Gohir.A02G174400 Gossypium hirsutum HOM05D003374 ORTHO05D009415 5.4e-55 217.6 127 77.2
Ah.03g134290 Amaranthus hybridus HOM05D003374 ORTHO05D009415 7.1e-55 217.2 127 76.4
Eucgr.J02491 Eucalyptus grandis HOM05D003374 ORTHO05D009415 7.1e-55 217.2 127 76.4
CANSAT25G2243 Cannabis sativa HOM05D003374 ORTHO05D009415 9.2e-55 216.9 127 76.4
Ca_24943_v3 Cicer arietinum L. HOM05D003374 ORTHO05D009415 9.2e-55 216.9 124 76.6
Atru.chr3.908 Acer truncatum HOM05D003374 ORTHO05D009415 1.2e-54 216.5 127 75.6
Nitab4.5_0002105g0060 Nicotiana tabacum HOM05D003374 ORTHO05D009415 2.1e-54 215.7 105 91.4
TPR.G25106 Trifolium pratense HOM05D003374 ORTHO05D009415 2.7e-54 215.3 124 75.8
DCAR_014045 Daucus carota HOM05D003374 ORTHO05D009415 3.5e-54 214.9 126 75.4
Lsat_1_v5_gn_2_75400 Lactuca sativa HOM05D003374 ORTHO05D009415 4.6e-54 214.5 127 75.6
GSVIVG01005194001 Vitis vinifera HOM05D003374 ORTHO05D009415 6.0e-54 214.2 123 75.6
Aqoxy6G01987 Aquilegia oxysepala HOM05D003374 ORTHO05D009415 1.0e-53 213.4 127 76.4
Cpa.g.sc6.314 Carica papaya HOM05D003374 ORTHO05D009415 1.0e-53 213.4 126 75.4
Ciclev10026501m.g Citrus clementina HOM05D003374 ORTHO05D009415 1.0e-53 213.4 127 74.0
Cc07_g11320 Coffea canephora HOM05D003374 ORTHO05D009415 1.0e-53 213.4 127 74.8
Cc08_g04870 Coffea canephora HOM05D003374 ORTHO05D009415 1.0e-53 213.4 127 74.8
Psat2g152000 Pisum sativum HOM05D003374 ORTHO05D009415 5.1e-53 211.1 124 73.4
TAR625G1333 Trochodendron aralioides HOM05D003374 ORTHO05D009415 5.1e-53 211.1 122 77.9
Haze_03703 Corylus avellana HOM05D003374 ORTHO05D009415 6.6e-53 210.7 126 75.4
Sc16g0001810 Simmondsia chinensis HOM05D003374 ORTHO05D009415 1.1e-52 209.9 127 72.4
Migut.C00507 Erythranthe guttata HOM05D003374 ORTHO05D009415 2.5e-52 208.8 126 73.0
Lj2g0014685 Lotus japonicus HOM05D003374 ORTHO05D009415 3.3e-52 208.4 125 74.4
TAR376G1073 Trochodendron aralioides HOM05D003374 ORTHO05D009415 3.3e-52 208.4 127 74.0
Cfa007030 Carpinus fangiana HOM05D003374 ORTHO05D009415 4.3e-52 208.0 123 76.4
Sabra05G0088200 Salix brachista HOM05D003374 ORTHO05D009415 4.3e-52 208.0 127 73.2
CSS0026426 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 7.3e-52 207.2 112 79.5
Glyma.11G081000 Glycine max HOM05D003374 ORTHO05D009415 9.6e-52 206.8 124 72.6
Lalb_Chr05g0212171 Lupinus albus HOM05D003374 ORTHO05D009415 9.6e-52 206.8 124 73.4
Potri.005G107700 Populus trichocarpa HOM05D003374 ORTHO05D009415 9.6e-52 206.8 127 74.0
PSO541G5712 Papaver somniferum HOM05D003374 ORTHO05D009415 2.1e-51 205.7 127 74.8
SGA_v2.0_scaffold16G07586 Striga asiatica HOM05D003374 ORTHO05D009415 2.1e-51 205.7 127 73.2
CSS0011665 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 3.6e-51 204.9 127 72.4
Phvul.002G104600 Phaseolus vulgaris HOM05D003374 ORTHO05D009415 3.6e-51 204.9 124 73.4
THA.LOC104807515 Tarenaya hassleriana HOM05D003374 ORTHO05D009415 3.6e-51 204.9 126 72.2
MD02G1123500 Malus domestica HOM05D003374 ORTHO05D009415 1.1e-50 203.4 126 71.4
Prupe.7G175100 Prunus persica HOM05D003374 ORTHO05D009415 1.1e-50 203.4 122 73.0
SalBow7G1184 Salvia bowleyana HOM05D003374 ORTHO05D009415 1.4e-50 203.0 127 73.2
PSO675G5709 Papaver somniferum HOM05D003374 ORTHO05D009415 1.8e-50 202.6 127 73.2
Actinidia22936 Actinidia chinensis HOM05D003374 ORTHO05D009415 5.2e-50 201.1 105 82.9
CSS0020449 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 5.2e-50 201.1 127 71.7
AT2G17705 Arabidopsis thaliana HOM05D003374 ORTHO05D009415 6.9e-50 200.7 126 69.0
AL3G50700 Arabidopsis lyrata HOM05D003374 ORTHO05D009415 1.5e-49 199.5 125 69.6
Thhalv10023081m.g Eutrema salsugineum HOM05D003374 ORTHO05D009415 1.5e-49 199.5 123 69.9
BcaC06g36302 Brassica carinata HOM05D003374 ORTHO05D009415 2.0e-49 199.1 125 69.6
C07p05590 Brassica napus HOM05D003374 ORTHO05D009415 2.6e-49 198.7 125 69.6
BcaB03g16543 Brassica carinata HOM05D003374 ORTHO05D009415 7.6e-49 197.2 124 69.4
Sp3g31110 Schrenkiella parvula HOM05D003374 ORTHO05D009415 9.9e-49 196.8 125 70.4
CARHR107990 Cardamine hirsuta HOM05D003374 ORTHO05D009415 1.3e-48 196.4 125 68.8
BraA07t28129Z Brassica rapa HOM05D003374 ORTHO05D009415 1.7e-48 196.1 125 69.6
FvH4_1g11071 Fragaria vesca HOM05D003374 ORTHO05D009415 1.7e-48 196.1 126 68.3
ATR0661G346 Amborella trichopoda HOM05D003374 ORTHO05D009415 1.1e-47 193.4 125 70.4
Carub.0003s3181 Capsella rubella HOM05D003374 ORTHO05D009415 1.9e-47 192.6 125 67.2
HPP92_015019 Vanilla planifolia HOM05D003374 ORTHO05D009415 1.6e-46 189.5 124 70.2
HPP92_028513 Vanilla planifolia HOM05D003374 ORTHO05D009415 1.6e-46 189.5 124 70.2
HanXRQChr14g0442031 Helianthus annuus HOM05D003374 ORTHO05D009415 2.7e-46 188.7 118 71.2
RcHm_v2.0_Chr2g0098341 Rosa chinensis HOM05D003374 ORTHO05D009415 4.6e-46 188.0 124 66.9
Aa31LG8G14980 Aethionema arabicum HOM05D003374 ORTHO05D009415 1.7e-45 186.0 107 72.9
unitig_26.g9807 Utricularia gibba HOM05D003374 ORTHO05D009415 6.6e-45 184.1 123 67.5
MD15G1237300 Malus domestica HOM05D003374 ORTHO05D009415 1.1e-44 183.3 144 59.7
BolC7t40958H Brassica oleracea HOM05D003374 ORTHO05D009415 2.5e-44 182.2 110 70.9
SEGI_17874 Sequoiadendron giganteum HOM05D003374 ORTHO05D009415 5.6e-44 181.0 122 67.2
MSTRG.25049 Avicennia marina HOM05D003374 ORTHO05D009415 9.6e-44 180.3 109 70.6
MELO3C013742.2 Cucumis melo HOM05D003374 ORTHO05D009415 1.3e-43 179.9 99 76.8
MBI05_g46750_MAGBIO Magnolia biondii HOM05D003374 ORTHO05D009415 1.3e-43 179.9 108 71.3
A07p03300 Brassica napus HOM05D003374 ORTHO05D009415 7.6e-41 170.6 103 70.9
Os03g0136500 Oryza sativa ssp. japonica HOM05D003374 ORTHO05D009415 7.6e-41 170.6 123 62.6
Sed0013270 Sechium edule HOM05D003374 ORTHO05D009415 2.4e-39 165.6 99 71.7
Zm00001eb002870 Zea mays HOM05D003374 ORTHO05D009415 2.1e-38 162.5 123 60.2
AagrBONN_evm.TU.Sc2ySwM_362.2709 Anthoceros agrestis HOM05D003374 ORTHO05D009415 4.6e-38 161.4 116 58.6
SMO013G0010 Selaginella moellendorffii HOM05D003374 ORTHO05D009415 5.1e-37 157.9 118 57.6
AagrBONN_evm.TU.Sc2ySwM_362.2707 Anthoceros agrestis HOM05D003374 ORTHO05D009415 1.1e-34 150.2 116 56.0
Pp3c17_11570 Physcomitrium patens HOM05D003374 ORTHO05D009415 1.2e-33 146.7 121 54.5
Sc16g0001870 Simmondsia chinensis HOM05D003374 ORTHO05D009415 4.5e-33 144.8 90 68.9
Pp3c1_28090 Physcomitrium patens HOM05D003374 ORTHO05D009415 1.7e-32 142.9 121 53.7
Pp3c2_13370 Physcomitrium patens HOM05D003374 ORTHO05D009415 1.4e-31 139.8 121 52.9
Mapoly0037s0042 Marchantia polymorpha HOM05D003374 ORTHO05D009415 3.3e-28 128.6 117 48.7
Glyma.01G162300 Glycine max HOM05D003374 ORTHO05D009415 5.6e-28 127.9 75 72.0
CBR_g80133 Chara braunii HOM05D003374 ORTHO05D009415 4.9e-24 114.8 113 46.0
Actinidia17404 Actinidia chinensis HOM05D003374 ORTHO05D009415 1.1e-18 97.1 101 48.5
Lj4P627T24 Lonicera japonica HOM05D003340 ORTHO05D003775 1.4e-10 70.1 97 40.2
Aqoxy6G00217 Aquilegia oxysepala HOM05D003340 ORTHO05D003775 1.5e-09 66.6 126 34.1
SGA_v2.0_scaffold52G18966 Striga asiatica HOM05D003340 ORTHO05D003775 2.0e-09 66.2 128 32.8
MSTRG.25383 Avicennia marina HOM05D003340 ORTHO05D003775 4.5e-09 65.1 130 31.5
Sopen04g027620 Solanum pennellii HOM05D003340 ORTHO05D003775 5.9e-09 64.7 87 37.9
Nitab4.5_0001187g0040 Nicotiana tabacum HOM05D003340 ORTHO05D003775 7.7e-09 64.3 87 36.8
Nitab4.5_0001344g0050 Nicotiana tabacum HOM05D003340 ORTHO05D003775 7.7e-09 64.3 87 36.8
Sabra05G0057400 Salix brachista HOM05D003340 ORTHO05D003775 7.7e-09 64.3 85 34.1
Eucgr.F04352 Eucalyptus grandis HOM05D003340 ORTHO05D003775 1.0e-08 63.9 127 32.3
Solyc04g071630.3 Solanum lycopersicum HOM05D003340 ORTHO05D003775 1.0e-08 63.9 127 31.5
Zm00001eb289950 Zea mays HOM05D003340 ORTHO05D003775 1.7e-08 63.2 124 32.3
Potri.005G070600 Populus trichocarpa HOM05D003340 ORTHO05D003775 2.2e-08 62.8 87 32.2
AUR62006909 Chenopodium quinoa HOM05D003340 ORTHO05D003775 3.8e-08 62.0 83 32.5
Migut.C01126 Erythranthe guttata HOM05D003340 ORTHO05D003775 3.8e-08 62.0 99 33.3
SMO119G0032 Selaginella moellendorffii HOM05D003340 ORTHO05D003775 3.8e-08 62.0 84 34.5
Nn1g08798 Nelumbo nucifera HOM05D003340 ORTHO05D003775 6.5e-08 61.2 88 33.0
Nn5g28288 Nelumbo nucifera HOM05D003340 ORTHO05D003775 6.5e-08 61.2 87 33.3
PGR102G2107 Punica granatum HOM05D003340 ORTHO05D003775 6.5e-08 61.2 84 38.1
SalBow7G3799 Salvia bowleyana HOM05D003340 ORTHO05D003775 6.5e-08 61.2 134 29.9
TWI74G0103 Tripterygium wilfordii HOM05D003340 ORTHO05D003775 6.5e-08 61.2 107 30.8
AUR62014338 Chenopodium quinoa HOM05D003340 ORTHO05D003775 8.5e-08 60.8 87 35.6
AUR62019080 Chenopodium quinoa HOM05D003340 ORTHO05D003775 8.5e-08 60.8 87 35.6
Lsat_1_v5_gn_1_10021 Lactuca sativa HOM05D003340 ORTHO05D003775 8.5e-08 60.8 87 34.5
Peaxi162Scf00079g00248 Petunia axillaris HOM05D003340 ORTHO05D003775 8.5e-08 60.8 124 30.6
HPP92_013888 Vanilla planifolia HOM05D003340 ORTHO05D003775 8.5e-08 60.8 87 34.5
Hund26810 Selenicereus undatus HOM05D003340 ORTHO05D003775 1.9e-07 59.7 87 34.5
Hund17293 Selenicereus undatus HOM05D003340 ORTHO05D003775 2.5e-07 59.3 87 34.5
CAN.G264.5 Capsicum annuum HOM05D003340 ORTHO05D003775 4.2e-07 58.5 85 35.3
EL10Ac4g09660 Beta vulgaris HOM05D003340 ORTHO05D003775 5.5e-07 58.2 82 34.1
Gohir.A01G189000 Gossypium hirsutum HOM05D003340 ORTHO05D003775 5.5e-07 58.2 126 29.4
Gohir.A05G268800 Gossypium hirsutum HOM05D003340 ORTHO05D003775 5.5e-07 58.2 87 35.6
Manes.13G057400 Manihot esculenta HOM05D003340 ORTHO05D003775 5.5e-07 58.2 91 35.2
Os01g0833400 Oryza sativa ssp. japonica HOM05D003340 ORTHO05D003775 5.5e-07 58.2 133 29.3
VMungo1309G0419 Vigna mungo HOM05D003340 ORTHO05D003775 5.5e-07 58.2 128 30.5
EL10Ac1g01010 Beta vulgaris HOM05D003340 ORTHO05D003775 7.2e-07 57.8 87 33.3
Oeu017298.1 Olea europaea HOM05D003340 ORTHO05D003775 7.2e-07 57.8 87 31.0
Oeu059436.2 Olea europaea HOM05D003340 ORTHO05D003775 7.2e-07 57.8 87 34.5
AagrBONN_evm.TU.Sc2ySwM_362.2682 Anthoceros agrestis HOM05D003340 ORTHO05D003775 9.4e-07 57.4 86 31.4
CSS0003781 Camellia sinensis var. sinensis HOM05D003340 ORTHO05D003775 9.4e-07 57.4 125 30.4
CSS0046765 Camellia sinensis var. sinensis HOM05D003340 ORTHO05D003775 9.4e-07 57.4 125 30.4
FAN20G1789 Fragaria x ananassa HOM05D003340 ORTHO05D003775 9.4e-07 57.4 88 34.1
Manes.02G163400 Manihot esculenta HOM05D003340 ORTHO05D003775 9.4e-07 57.4 87 33.3
TAR381G1109 Trochodendron aralioides HOM05D003340 ORTHO05D003775 9.4e-07 57.4 87 32.2
Cpa.g.sc37.41 Carica papaya HOM05D003340 ORTHO05D003775 1.2e-06 57.0 95 27.4
Dinv07220 Davidia involucrata HOM05D003340 ORTHO05D003775 1.2e-06 57.0 86 33.7
FAN15G0091 Fragaria x ananassa HOM05D003340 ORTHO05D003775 1.2e-06 57.0 88 34.1
Gorai.009G283300 Gossypium raimondii HOM05D003340 ORTHO05D003775 1.2e-06 57.0 87 34.5
HPP92_018105 Vanilla planifolia HOM05D003340 ORTHO05D003775 1.2e-06 57.0 88 31.8
Ah.06g188530 Amaranthus hybridus HOM05D003340 ORTHO05D003775 1.6e-06 56.6 83 32.5
Cc10_g11880 Coffea canephora HOM05D003340 ORTHO05D003775 1.6e-06 56.6 123 28.5
Dinv07260 Davidia involucrata HOM05D003340 ORTHO05D003775 1.6e-06 56.6 90 31.1
Gohir.A06G044800 Gossypium hirsutum HOM05D003340 ORTHO05D003775 1.6e-06 56.6 87 34.5
Manes.18G077306 Manihot esculenta HOM05D003340 ORTHO05D003775 1.6e-06 56.6 127 29.1
RcHm_v2.0_Chr6g0295821 Rosa chinensis HOM05D003340 ORTHO05D003775 1.6e-06 56.6 125 27.2
PGSC0003DMG400006659 Solanum tuberosum HOM05D003340 ORTHO05D003775 1.6e-06 56.6 85 34.1
Gohir.D01G180500 Gossypium hirsutum HOM05D003340 ORTHO05D003775 2.1e-06 56.2 126 28.6
Gorai.002G222100 Gossypium raimondii HOM05D003340 ORTHO05D003775 2.1e-06 56.2 126 28.6
Medtr3g088030 Medicago truncatula HOM05D003340 ORTHO05D003775 2.1e-06 56.2 128 28.1
Rhsim06G0103500 Rhododendron simsii HOM05D003340 ORTHO05D003775 2.1e-06 56.2 129 28.7
Thecc.08G125400 Theobroma cacao HOM05D003340 ORTHO05D003775 2.1e-06 56.2 87 34.5
Duzib093G0952 Durio zibethinus HOM05D003340 ORTHO05D003775 2.7e-06 55.8 123 30.1
Glyma.13G079000 Glycine max HOM05D003340 ORTHO05D003775 2.7e-06 55.8 127 29.9
Gohir.D05G270700 Gossypium hirsutum HOM05D003340 ORTHO05D003775 2.7e-06 55.8 87 33.3
Lalb_Chr10g0101671 Lupinus albus HOM05D003340 ORTHO05D003775 2.7e-06 55.8 124 29.0
MBI11_g05791_MAGBIO Magnolia biondii HOM05D003340 ORTHO05D003775 2.7e-06 55.8 129 30.2
Psat6g041160 Pisum sativum HOM05D003340 ORTHO05D003775 2.7e-06 55.8 126 28.6
SGA_v2.0_scaffold120G33021 Striga asiatica HOM05D003340 ORTHO05D003775 2.7e-06 55.8 97 34.0
CANSAT25G3576 Cannabis sativa HOM05D003340 ORTHO05D003775 3.6e-06 55.5 123 28.5
Gohir.D06G045300 Gossypium hirsutum HOM05D003340 ORTHO05D003775 3.6e-06 55.5 87 34.5
Gorai.010G050300 Gossypium raimondii HOM05D003340 ORTHO05D003775 3.6e-06 55.5 87 34.5
MD15G1348300 Malus domestica HOM05D003340 ORTHO05D003775 3.6e-06 55.5 88 33.0
Mapoly0166s0008 Marchantia polymorpha HOM05D003340 ORTHO05D003775 4.7e-06 55.1 90 34.4
Nn3g19971 Nelumbo nucifera HOM05D003340 ORTHO05D003775 4.7e-06 55.1 62 33.9
HPP92_019003 Vanilla planifolia HOM05D003340 ORTHO05D003775 4.7e-06 55.1 92 33.7
Atru.chr13.1461 Acer truncatum HOM05D003340 ORTHO05D003775 6.1e-06 54.7 87 34.5
PSO170G4666 Papaver somniferum HOM05D003340 ORTHO05D003775 6.1e-06 54.7 126 28.6
QL09p034593 Quercus lobata HOM05D003340 ORTHO05D003775 6.1e-06 54.7 87 33.3
TWI32G0782 Tripterygium wilfordii HOM05D003340 ORTHO05D003775 6.1e-06 54.7 87 34.5
GSVIVG01022376001 Vitis vinifera HOM05D003340 ORTHO05D003775 6.1e-06 54.7 86 32.6
COL.COLO4_36312 Corchorus olitorius HOM05D003340 ORTHO05D003775 7.9e-06 54.3 87 33.3
Glyma.06G113100 Glycine max HOM05D003340 ORTHO05D003775 7.9e-06 54.3 87 33.3
Psat5g087400 Pisum sativum HOM05D003340 ORTHO05D003775 7.9e-06 54.3 126 27.8
Hund21783 Selenicereus undatus HOM05D003340 ORTHO05D003775 7.9e-06 54.3 86 29.1


User provided reference genes

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