Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g026870 Solanum pennellii HOM05D005105 ORTHO05D006244 6.6e-176 620.5 301 100.0
Solyc02g082210.4 Solanum lycopersicum HOM05D005105 ORTHO05D006244 6.8e-173 610.5 301 98.3
PGSC0003DMG400013660 Solanum tuberosum HOM05D005105 ORTHO05D006244 1.0e-168 596.7 301 95.3
Nitab4.5_0011381g0040 Nicotiana tabacum HOM05D005105 ORTHO05D006244 1.9e-159 565.8 301 90.4
Nitab4.5_0011717g0030 Nicotiana tabacum HOM05D005105 ORTHO05D006244 1.2e-156 556.6 300 89.3
Migut.F00035 Erythranthe guttata HOM05D005105 ORTHO05D006244 3.3e-127 458.8 302 70.9
Dinv33309 Davidia involucrata HOM05D005105 ORTHO05D006244 5.8e-124 448.0 295 72.2
Oeu020395.1 Olea europaea HOM05D005105 ORTHO05D006244 5.8e-124 448.0 302 71.5
Lj7A613T64 Lonicera japonica HOM05D005105 ORTHO05D006244 1.3e-123 446.8 304 69.4
RcHm_v2.0_Chr2g0176111 Rosa chinensis HOM05D005105 ORTHO05D006244 1.3e-123 446.8 301 69.8
vmacro18364 Vaccinium macrocarpon HOM05D005105 ORTHO05D006244 2.9e-123 445.7 301 69.1
CsaV3_5G024330 Cucumis sativus L. HOM05D005105 ORTHO05D006244 3.8e-123 445.3 302 69.9
Sed0022814 Sechium edule HOM05D005105 ORTHO05D006244 3.8e-123 445.3 302 69.2
GSVIVG01033038001 Vitis vinifera HOM05D005105 ORTHO05D006244 1.4e-122 443.4 300 69.3
MELO3C025087.2 Cucumis melo HOM05D005105 ORTHO05D006244 2.5e-122 442.6 302 68.9
Rhsim08G0041000 Rhododendron simsii HOM05D005105 ORTHO05D006244 2.7e-121 439.1 301 68.4
FvH4_6g53950 Fragaria vesca HOM05D005105 ORTHO05D006244 3.5e-121 438.7 301 68.8
MD09G1007000 Malus domestica HOM05D005105 ORTHO05D006244 7.9e-121 437.6 301 68.8
FAN14G3030 Fragaria x ananassa HOM05D005105 ORTHO05D006244 1.0e-120 437.2 301 68.4
TAR629G0447 Trochodendron aralioides HOM05D005105 ORTHO05D006244 1.0e-120 437.2 300 66.3
Potri.001G325500 Populus trichocarpa HOM05D005105 ORTHO05D006244 1.3e-120 436.8 302 67.9
Atru.chr6.2613 Acer truncatum HOM05D005105 ORTHO05D006244 1.8e-120 436.4 303 68.3
Cc07_g01060 Coffea canephora HOM05D005105 ORTHO05D006244 3.9e-120 435.3 302 69.2
Peaxi162Scf00331g00014 Petunia axillaris HOM05D005105 ORTHO05D006244 3.9e-120 435.3 239 87.0
TWI34G1796 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 3.9e-120 435.3 301 67.1
TWI60G0613 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 6.7e-120 434.5 301 67.4
ClCG01G008700 Citrullus lanatus HOM05D005105 ORTHO05D006244 8.7e-120 434.1 302 67.9
FAN09G0463 Fragaria x ananassa HOM05D005105 ORTHO05D006244 8.7e-120 434.1 301 67.8
QL02p070577 Quercus lobata HOM05D005105 ORTHO05D006244 1.1e-119 433.7 301 67.1
FAN02G1943 Fragaria x ananassa HOM05D005105 ORTHO05D006244 1.9e-119 433.0 301 67.4
CANSAT21G1015 Cannabis sativa HOM05D005105 ORTHO05D006244 3.3e-119 432.2 300 66.3
FAN05G2765 Fragaria x ananassa HOM05D005105 ORTHO05D006244 7.4e-119 431.0 301 67.4
Prupe.3G310100 Prunus persica HOM05D005105 ORTHO05D006244 7.4e-119 431.0 301 67.4
SalBow4G0131 Salvia bowleyana HOM05D005105 ORTHO05D006244 9.7e-119 430.6 301 68.8
Nn3g16360 Nelumbo nucifera HOM05D005105 ORTHO05D006244 2.8e-118 429.1 302 67.5
Thecc.04G041900 Theobroma cacao HOM05D005105 ORTHO05D006244 2.8e-118 429.1 302 66.6
Eucgr.I01623 Eucalyptus grandis HOM05D005105 ORTHO05D006244 8.2e-118 427.6 301 66.4
DCAR_015209 Daucus carota HOM05D005105 ORTHO05D006244 1.1e-117 427.2 303 68.6
Manes.04G087600 Manihot esculenta HOM05D005105 ORTHO05D006244 4.1e-117 425.2 302 67.2
Ciclev10014761m.g Citrus clementina HOM05D005105 ORTHO05D006244 5.3e-117 424.9 302 66.2
PGR142G1816 Punica granatum HOM05D005105 ORTHO05D006244 3.4e-116 422.2 301 66.8
Duzib147G0369 Durio zibethinus HOM05D005105 ORTHO05D006244 5.9e-116 421.4 302 65.6
Aqoxy5G03244_Aqoxy5G03245 Aquilegia oxysepala HOM05D005105 ORTHO05D006244 2.5e-114 416.0 303 63.7
Ca_07318_v3 Cicer arietinum L. HOM05D005105 ORTHO05D006244 4.6e-113 411.8 297 63.6
CSS0048130 Camellia sinensis var. sinensis HOM05D005105 ORTHO05D006244 1.0e-112 410.6 285 67.7
Haze_14911 Corylus avellana HOM05D005105 ORTHO05D006244 1.0e-112 410.6 284 67.6
Lj1g0026609 Lotus japonicus HOM05D005105 ORTHO05D006244 1.0e-112 410.6 298 64.1
MD17G1010700 Malus domestica HOM05D005105 ORTHO05D006244 2.3e-112 409.5 301 65.4
CSS0029044 Camellia sinensis var. sinensis HOM05D005105 ORTHO05D006244 3.0e-112 409.1 302 63.2
Lj2g0026571 Lotus japonicus HOM05D005105 ORTHO05D006244 6.7e-112 407.9 300 65.0
Gohir.D07G238700 Gossypium hirsutum HOM05D005105 ORTHO05D006244 8.8e-112 407.5 302 63.6
Gorai.006G044700 Gossypium raimondii HOM05D005105 ORTHO05D006244 1.9e-111 406.4 325 59.1
Glyma.16G052500 Glycine max HOM05D005105 ORTHO05D006244 2.5e-111 406.0 297 63.6
Gorai.001G274700 Gossypium raimondii HOM05D005105 ORTHO05D006244 2.5e-111 406.0 302 63.2
Lj5A92G44 Lonicera japonica HOM05D005105 ORTHO05D006244 2.5e-111 406.0 302 64.2
Gohir.A07G231500 Gossypium hirsutum HOM05D005105 ORTHO05D006244 9.7e-111 404.1 302 63.2
HanXRQChr17g0551611 Helianthus annuus HOM05D005105 ORTHO05D006244 9.7e-111 404.1 301 62.5
PSO017G6125 Papaver somniferum HOM05D005105 ORTHO05D006244 1.3e-110 403.7 300 62.7
Lalb_Chr00c40g0412501 Lupinus albus HOM05D005105 ORTHO05D006244 1.7e-110 403.3 297 64.3
Lsat_1_v5_gn_0_23961 Lactuca sativa HOM05D005105 ORTHO05D006244 2.8e-110 402.5 292 64.0
THA.LOC104825638 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 2.8e-110 402.5 302 63.6
CiPaw.03G004800 Carya illinoinensis HOM05D005105 ORTHO05D006244 3.7e-110 402.1 288 66.3
VMungo1383G1917 Vigna mungo HOM05D005105 ORTHO05D006244 3.7e-110 402.1 297 64.0
arahy.Tifrunner.gnm1.ann1.B1CDD0 Arachis hypogaea HOM05D005105 ORTHO05D006244 4.8e-110 401.7 297 62.6
Sabra16G0208000 Salix brachista HOM05D005105 ORTHO05D006244 6.3e-110 401.4 270 69.3
PSO478G4366 Papaver somniferum HOM05D005105 ORTHO05D006244 8.2e-110 401.0 300 62.3
arahy.Tifrunner.gnm1.ann1.JMV5LB Arachis hypogaea HOM05D005105 ORTHO05D006244 1.1e-109 400.6 297 62.6
Medtr7g026520 Medicago truncatula HOM05D005105 ORTHO05D006244 1.4e-109 400.2 298 60.7
Sc09g0007730 Simmondsia chinensis HOM05D005105 ORTHO05D006244 1.4e-109 400.2 300 62.7
Cfa007197 Carpinus fangiana HOM05D005105 ORTHO05D006244 6.9e-109 397.9 301 62.8
vmacro19146 Vaccinium macrocarpon HOM05D005105 ORTHO05D006244 6.9e-109 397.9 302 61.9
Hma1.2p1_0093F.1_g046930 Hydrangea macrophylla HOM05D005105 ORTHO05D006244 9.1e-109 397.5 300 64.3
AUR62029433 Chenopodium quinoa HOM05D005105 ORTHO05D006244 4.5e-108 395.2 300 62.3
GSVIVG01008594001 Vitis vinifera HOM05D005105 ORTHO05D006244 4.5e-108 395.2 300 64.0
Lsat_1_v5_gn_5_10960 Lactuca sativa HOM05D005105 ORTHO05D006244 1.7e-107 393.3 301 60.8
AUR62003394 Chenopodium quinoa HOM05D005105 ORTHO05D006244 2.2e-107 392.9 300 62.3
ECA246G4542 Erigeron canadensis HOM05D005105 ORTHO05D006244 2.2e-107 392.9 301 61.5
DCAR_007509 Daucus carota HOM05D005105 ORTHO05D006244 3.8e-107 392.1 303 62.4
EL10Ac6g15451 Beta vulgaris HOM05D005105 ORTHO05D006244 1.4e-106 390.2 300 61.7
Psat3g181600 Pisum sativum HOM05D005105 ORTHO05D006244 4.2e-106 388.7 302 60.3
VMungo0464G0185 Vigna mungo HOM05D005105 ORTHO05D006244 5.5e-106 388.3 288 64.6
HanXRQChr05g0155591 Helianthus annuus HOM05D005105 ORTHO05D006244 1.6e-105 386.7 299 60.5
Phvul.004G070700 Phaseolus vulgaris HOM05D005105 ORTHO05D006244 2.7e-105 386.0 300 62.3
unitig_0.g1913 Utricularia gibba HOM05D005105 ORTHO05D006244 2.7e-105 386.0 290 63.4
Atru.chr6.2614 Acer truncatum HOM05D005105 ORTHO05D006244 1.4e-104 383.6 277 66.1
BcaC06g33873 Brassica carinata HOM05D005105 ORTHO05D006244 3.0e-104 382.5 302 59.3
BolC7t44120H Brassica oleracea HOM05D005105 ORTHO05D006244 3.0e-104 382.5 302 59.3
Thhalv10003939m.g Eutrema salsugineum HOM05D005105 ORTHO05D006244 3.0e-104 382.5 302 59.6
SHI04027 Sapria himalayana HOM05D005105 ORTHO05D006244 3.0e-104 382.5 327 58.1
Sp2g16080 Schrenkiella parvula HOM05D005105 ORTHO05D006244 3.0e-104 382.5 302 59.9
C07p36060 Brassica napus HOM05D005105 ORTHO05D006244 8.8e-104 380.9 302 58.9
Phvul.001G090000 Phaseolus vulgaris HOM05D005105 ORTHO05D006244 1.5e-103 380.2 297 61.3
BcaC06g31032 Brassica carinata HOM05D005105 ORTHO05D006244 3.3e-103 379.0 302 58.9
BraA06t27085Z Brassica rapa HOM05D005105 ORTHO05D006244 3.3e-103 379.0 302 58.9
A06p41600 Brassica napus HOM05D005105 ORTHO05D006244 5.7e-103 378.3 302 58.6
CARHR148130 Cardamine hirsuta HOM05D005105 ORTHO05D006244 4.8e-102 375.2 302 58.3
AT3G26950 Arabidopsis thaliana HOM05D005105 ORTHO05D006244 8.2e-102 374.4 302 58.6
Glyma.16G146100 Glycine max HOM05D005105 ORTHO05D006244 1.1e-101 374.0 300 60.7
Carub.0005s0514 Capsella rubella HOM05D005105 ORTHO05D006244 2.4e-101 372.9 302 58.3
Aa31LG2G5630 Aethionema arabicum HOM05D005105 ORTHO05D006244 5.3e-101 371.7 330 55.8
ATR0582G106 Amborella trichopoda HOM05D005105 ORTHO05D006244 9.1e-101 370.9 303 59.1
HPP92_009891 Vanilla planifolia HOM05D005105 ORTHO05D006244 1.2e-100 370.5 301 59.5
THA.LOC104805319 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 2.0e-100 369.8 313 58.5
AL5G15980 Arabidopsis lyrata HOM05D005105 ORTHO05D006244 1.7e-99 366.7 302 57.6
CDE06G1277 Ceratophyllum demersum HOM05D005105 ORTHO05D006244 2.1e-97 359.8 302 57.9
Prupe.3G297400 Prunus persica HOM05D005105 ORTHO05D006244 2.7e-97 359.4 316 57.3
Actinidia36228 Actinidia chinensis HOM05D005105 ORTHO05D006244 4.7e-97 358.6 292 62.3
COL.COLO4_13307 Corchorus olitorius HOM05D005105 ORTHO05D006244 6.1e-97 358.2 300 58.0
Os11g0507400 Oryza sativa ssp. japonica HOM05D005105 ORTHO05D006244 9.7e-95 350.9 298 55.7
Actinidia18328 Actinidia chinensis HOM05D005105 ORTHO05D006244 1.0e-91 340.9 259 62.9
Duzib264G1310 Durio zibethinus HOM05D005105 ORTHO05D006244 1.5e-90 337.0 236 65.3
Dinv23187 Davidia involucrata HOM05D005105 ORTHO05D006244 3.2e-90 335.9 247 65.2
TWI34G0688 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 4.4e-87 325.5 217 68.2
SMO180G0002 Selaginella moellendorffii HOM05D005105 ORTHO05D006244 4.5e-76 288.9 299 46.8
ECA246G1012 Erigeron canadensis HOM05D005105 ORTHO05D006244 2.4e-69 266.5 222 60.8
Pp3c1_35010 Physcomitrium patens HOM05D005105 ORTHO05D006244 4.5e-68 262.3 304 43.4
Cpa.g.sc70.110 Carica papaya HOM05D005105 ORTHO05D006244 2.8e-65 253.1 188 65.4
Pp3c21_14570 Physcomitrium patens HOM05D005105 ORTHO05D006244 3.6e-65 252.7 311 42.4
Gohir.A09G038300 Gossypium hirsutum HOM05D005105 ORTHO05D006244 6.8e-64 248.4 189 60.8
CDE05G2066 Ceratophyllum demersum HOM05D005105 ORTHO05D006244 3.6e-57 226.1 147 72.1
Actinidia25549 Actinidia chinensis HOM05D005105 ORTHO05D006244 2.5e-50 203.4 134 69.4
Gohir.D09G039750 Gossypium hirsutum HOM05D005105 ORTHO05D006244 1.3e-30 137.9 113 54.9
Actinidia05877 Actinidia chinensis HOM05D000139 ORTHO05D000103 3.8e-30 136.3 103 65.0
AagrBONN_evm.TU.Sc2ySwM_340.35 Anthoceros agrestis HOM05D005105 ORTHO05D006244 8.4e-30 135.2 297 29.6
Glyma.02G065000 Glycine max HOM05D005105 ORTHO05D006244 4.3e-26 122.9 117 53.0
THA.LOC104813335 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 6.9e-24 115.5 109 51.4
Glyma.19G097101 Glycine max HOM05D005105 ORTHO05D006244 1.2e-23 114.8 84 64.3
PSO063G6475 Papaver somniferum HOM05D005105 ORTHO05D006244 3.2e-13 80.1 61 60.7
HPP92_009880 Vanilla planifolia HOM05D005105 ORTHO05D006244 2.7e-12 77.0 74 48.6
CBR_g57654 Chara braunii HOM05D000004 ORTHO05D000002 1.1e-08 65.1 83 36.1


User provided reference genes

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