Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g026560 Solanum pennellii HOM05D008511 ORTHO05D010691 5.5e-65 250.8 121 100.0
Nitab4.5_0000632g0180 Nicotiana tabacum HOM05D008511 ORTHO05D010691 1.7e-50 202.6 114 86.8
Nitab4.5_0000844g0310 Nicotiana tabacum HOM05D008511 ORTHO05D010691 1.7e-50 202.6 114 86.0
CAN.G809.39 Capsicum annuum HOM05D008511 ORTHO05D010691 1.2e-48 196.4 115 82.6
PGSC0003DMG402007333 Solanum tuberosum HOM05D008511 ORTHO05D010691 8.9e-31 137.1 74 94.6
Prupe.4G119000 Prunus persica HOM05D008511 ORTHO05D010691 7.5e-30 134.0 126 51.6
Dinv31195 Davidia involucrata HOM05D008511 ORTHO05D010691 2.2e-29 132.5 121 54.5
Aqoxy2G01550 Aquilegia oxysepala HOM05D008511 ORTHO05D010691 2.4e-28 129.0 123 50.4
QL11p011849 Quercus lobata HOM05D008511 ORTHO05D010691 2.4e-28 129.0 122 51.6
SGA_v2.0_scaffold168G38543 Striga asiatica HOM05D008511 ORTHO05D010691 3.2e-28 128.6 123 51.2
FvH4_3g13150 Fragaria vesca HOM05D008511 ORTHO05D010691 2.0e-27 125.9 122 50.0
MD05G1244600 Malus domestica HOM05D008511 ORTHO05D010691 1.3e-26 123.2 120 51.7
Oeu010662.1 Olea europaea HOM05D008511 ORTHO05D010691 1.7e-26 122.9 127 52.8
TAR624G0648 Trochodendron aralioides HOM05D008511 ORTHO05D010691 3.9e-26 121.7 121 47.9
RcHm_v2.0_Chr5g0021391 Rosa chinensis HOM05D008511 ORTHO05D010691 5.0e-26 121.3 126 46.8
CiPaw.10G106900 Carya illinoinensis HOM05D008511 ORTHO05D010691 1.1e-25 120.2 123 49.6
CANSAT35G2052 Cannabis sativa HOM05D008511 ORTHO05D010691 2.1e-24 115.9 120 51.7
Haze_05233 Corylus avellana HOM05D008511 ORTHO05D010691 1.4e-23 113.2 123 48.8
Migut.D01193 Erythranthe guttata HOM05D008511 ORTHO05D010691 5.2e-23 111.3 128 46.1
FAN21G0240 Fragaria x ananassa HOM05D008511 ORTHO05D010691 8.9e-23 110.5 101 49.5
Nn7g38379 Nelumbo nucifera HOM05D008511 ORTHO05D010691 2.6e-22 109.0 98 50.0
Cpa.g.sc30.92 Carica papaya HOM05D008511 ORTHO05D010691 3.4e-22 108.6 121 46.3
Sed0008274 Sechium edule HOM05D008511 ORTHO05D010691 3.4e-22 108.6 121 45.5
TWI38G1802 Tripterygium wilfordii HOM05D008511 ORTHO05D010691 4.4e-22 108.2 122 44.3
Potri.001G075700 Populus trichocarpa HOM05D008511 ORTHO05D010691 1.3e-21 106.7 124 47.6
Sc24g0002900 Simmondsia chinensis HOM05D008511 ORTHO05D010691 1.3e-21 106.7 118 44.1
Sabra01G0053200 Salix brachista HOM05D008511 ORTHO05D010691 1.7e-21 106.3 124 48.4
Atru.chr10.265 Acer truncatum HOM05D008511 ORTHO05D010691 2.4e-20 102.4 128 44.5
DCAR_007773 Daucus carota HOM05D008511 ORTHO05D010691 1.6e-19 99.8 122 41.0
FAN16G0518 Fragaria x ananassa HOM05D008511 ORTHO05D010691 1.6e-19 99.8 100 47.0
CsaV3_1G010050 Cucumis sativus L. HOM05D008511 ORTHO05D010691 4.6e-19 98.2 125 42.4
arahy.Tifrunner.gnm1.ann1.LWVG2R Arachis hypogaea HOM05D008511 ORTHO05D010691 6.0e-19 97.8 130 39.2
arahy.Tifrunner.gnm1.ann1.5RH3SU Arachis hypogaea HOM05D008511 ORTHO05D010691 1.0e-18 97.1 129 38.0
MBI02_g25824_MAGBIO Magnolia biondii HOM05D008511 ORTHO05D010691 1.1e-17 93.6 125 42.4
Manes.03G071600 Manihot esculenta HOM05D008511 ORTHO05D010691 1.1e-17 93.6 124 40.3
Thecc.02G002800 Theobroma cacao HOM05D008511 ORTHO05D010691 2.5e-17 92.4 121 43.0
ClCG03G004120 Citrullus lanatus HOM05D008511 ORTHO05D010691 5.6e-17 91.3 106 44.3
COL.COLO4_16225 Corchorus olitorius HOM05D008511 ORTHO05D010691 1.2e-16 90.1 125 40.0
Gorai.008G051400 Gossypium raimondii HOM05D008511 ORTHO05D010691 8.1e-16 87.4 120 42.5
Gohir.A12G050000 Gossypium hirsutum HOM05D008511 ORTHO05D010691 5.2e-15 84.7 120 41.7
Gohir.D12G048400 Gossypium hirsutum HOM05D008511 ORTHO05D010691 5.2e-15 84.7 119 42.0
HPP92_009504 Vanilla planifolia HOM05D008511 ORTHO05D010691 6.8e-15 84.3 121 33.9
Duzib132G0693 Durio zibethinus HOM05D008511 ORTHO05D010691 7.5e-14 80.9 118 41.5
Ca_01975_v3 Cicer arietinum L. HOM05D008511 ORTHO05D010691 1.3e-13 80.1 124 32.3
Cfa001274 Carpinus fangiana HOM05D008511 ORTHO05D010691 1.4e-12 76.6 72 48.6
ATR0763G254 Amborella trichopoda HOM05D008511 ORTHO05D010691 1.0e-10 70.5 123 35.8
Solyc02g081930.3 Solanum lycopersicum HOM05D008511 ORTHO05D010691 7.6e-06 54.3 24 100.0


User provided reference genes

Program Settings