Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g026460 Solanum pennellii HOM05D005903 ORTHO05D007293 7.7e-141 503.8 258 100.0
Solyc02g081840.4 Solanum lycopersicum HOM05D005903 ORTHO05D007293 2.1e-138 495.7 258 98.1
PGSC0003DMG400007316 Solanum tuberosum HOM05D005903 ORTHO05D007293 1.0e-137 493.4 258 97.7
Nitab4.5_0010610g0030 Nicotiana tabacum HOM05D005903 ORTHO05D007293 5.5e-131 471.1 258 92.6
Nitab4.5_0000844g0290 Nicotiana tabacum HOM05D005903 ORTHO05D007293 6.8e-129 464.2 256 91.8
CAN.G809.52 Capsicum annuum HOM05D005903 ORTHO05D007293 3.1e-126 455.3 258 90.3
Dinv07001 Davidia involucrata HOM05D005903 ORTHO05D007293 1.8e-105 386.3 255 74.9
TAR624G0428 Trochodendron aralioides HOM05D005903 ORTHO05D007293 4.4e-104 381.7 258 74.4
Cc09_g05110 Coffea canephora HOM05D005903 ORTHO05D007293 7.5e-104 380.9 255 74.9
Hma1.2p1_0088F.1_g045276 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 2.9e-103 379.0 258 72.1
vmacro03560 Vaccinium macrocarpon HOM05D005903 ORTHO05D007293 1.1e-102 377.1 258 72.1
Migut.M02015 Erythranthe guttata HOM05D005903 ORTHO05D007293 1.9e-102 376.3 256 71.1
QL11p012010 Quercus lobata HOM05D005903 ORTHO05D007293 1.9e-102 376.3 256 72.7
Migut.G01043 Erythranthe guttata HOM05D005903 ORTHO05D007293 4.6e-101 371.7 256 70.7
Peaxi162Scf00036g02217 Petunia axillaris HOM05D005903 ORTHO05D007293 4.6e-101 371.7 256 75.8
Thecc.02G003100 Theobroma cacao HOM05D005903 ORTHO05D007293 7.8e-101 370.9 258 70.2
Lj1C1150G3 Lonicera japonica HOM05D005903 ORTHO05D007293 1.0e-100 370.5 254 72.0
Rhsim13G0219000 Rhododendron simsii HOM05D005903 ORTHO05D007293 1.0e-100 370.5 255 71.8
Hma1.2p1_0088F.1_g045273 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 5.0e-100 368.2 268 69.4
CiPaw.09G138500 Carya illinoinensis HOM05D005903 ORTHO05D007293 1.1e-99 367.1 255 72.2
Cc00_g27340 Coffea canephora HOM05D005903 ORTHO05D007293 1.5e-99 366.7 255 72.9
Rhsim07G0106900 Rhododendron simsii HOM05D005903 ORTHO05D007293 2.5e-99 365.9 257 71.2
Hma1.2p1_1011F.1_g247520 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 4.3e-99 365.2 268 68.7
Potri.001G076200 Populus trichocarpa HOM05D005903 ORTHO05D007293 4.3e-99 365.2 258 70.5
GSVIVG01012154001 Vitis vinifera HOM05D005903 ORTHO05D007293 1.2e-98 363.6 258 70.2
Atru.chr10.296 Acer truncatum HOM05D005903 ORTHO05D007293 2.8e-98 362.5 256 70.3
Manes.03G070940 Manihot esculenta HOM05D005903 ORTHO05D007293 2.8e-98 362.5 258 68.6
MD05G1245400 Malus domestica HOM05D005903 ORTHO05D007293 3.6e-98 362.1 256 70.3
FvH4_3g13050 Fragaria vesca HOM05D005903 ORTHO05D007293 4.7e-98 361.7 256 69.5
FAN11G1857 Fragaria x ananassa HOM05D005903 ORTHO05D007293 4.7e-98 361.7 256 69.5
FAN16G3015 Fragaria x ananassa HOM05D005903 ORTHO05D007293 4.7e-98 361.7 256 69.1
Prupe.4G118500 Prunus persica HOM05D005903 ORTHO05D007293 4.7e-98 361.7 245 73.5
RcHm_v2.0_Chr5g0021241 Rosa chinensis HOM05D005903 ORTHO05D007293 3.1e-97 359.0 256 69.1
Cpa.g.sc30.99 Carica papaya HOM05D005903 ORTHO05D007293 5.2e-97 358.2 255 68.6
FAN21G0687 Fragaria x ananassa HOM05D005903 ORTHO05D007293 6.8e-97 357.8 256 68.0
Nn7g38356 Nelumbo nucifera HOM05D005903 ORTHO05D007293 1.2e-96 357.1 255 70.2
PGR044G2521 Punica granatum HOM05D005903 ORTHO05D007293 1.2e-96 357.1 256 68.8
FAN25G2454 Fragaria x ananassa HOM05D005903 ORTHO05D007293 7.5e-96 354.4 256 68.4
Ciclev10016117m.g Citrus clementina HOM05D005903 ORTHO05D007293 1.7e-95 353.2 256 66.4
Eucgr.A00192 Eucalyptus grandis HOM05D005903 ORTHO05D007293 8.3e-95 350.9 255 67.5
Gohir.A11G047300 Gossypium hirsutum HOM05D005903 ORTHO05D007293 8.3e-95 350.9 258 66.3
Sabra01G0053000 Salix brachista HOM05D005903 ORTHO05D007293 1.4e-94 350.1 257 69.3
Gohir.D11G050900 Gossypium hirsutum HOM05D005903 ORTHO05D007293 2.4e-94 349.4 258 65.5
Gorai.007G055300 Gossypium raimondii HOM05D005903 ORTHO05D007293 9.2e-94 347.4 258 65.1
Thhalv10011094m.g Eutrema salsugineum HOM05D005903 ORTHO05D007293 3.5e-93 345.5 255 66.7
CANSAT35G1866 Cannabis sativa HOM05D005903 ORTHO05D007293 6.0e-93 344.7 262 64.9
Duzib052G0373 Durio zibethinus HOM05D005903 ORTHO05D007293 7.8e-93 344.4 280 62.9
C08p34580 Brassica napus HOM05D005903 ORTHO05D007293 1.0e-92 344.0 255 67.1
BolC8t51059H Brassica oleracea HOM05D005903 ORTHO05D007293 1.0e-92 344.0 255 67.1
AT3G47630 Arabidopsis thaliana HOM05D005903 ORTHO05D007293 1.3e-92 343.6 255 66.3
BcaC07g40489 Brassica carinata HOM05D005903 ORTHO05D007293 1.3e-92 343.6 255 67.1
Rhsim05G0003000 Rhododendron simsii HOM05D005903 ORTHO05D007293 1.7e-92 343.2 261 68.2
DCAR_003756 Daucus carota HOM05D005903 ORTHO05D007293 2.3e-92 342.8 291 60.8
BraA09t40620Z Brassica rapa HOM05D005903 ORTHO05D007293 5.1e-92 341.7 255 65.9
A09p51850 Brassica napus HOM05D005903 ORTHO05D007293 1.5e-91 340.1 255 65.5
BraA06t25085Z Brassica rapa HOM05D005903 ORTHO05D007293 1.5e-91 340.1 255 65.9
BolC3t19474H Brassica oleracea HOM05D005903 ORTHO05D007293 3.3e-91 339.0 255 66.3
Lj4g0014401 Lotus japonicus HOM05D005903 ORTHO05D007293 3.3e-91 339.0 256 64.1
PSO675G2427 Papaver somniferum HOM05D005903 ORTHO05D007293 3.3e-91 339.0 258 65.5
Carub.0005s1376 Capsella rubella HOM05D005903 ORTHO05D007293 4.3e-91 338.6 255 65.1
THA.LOC104812245 Tarenaya hassleriana HOM05D005903 ORTHO05D007293 5.6e-91 338.2 255 64.3
BcaC01g01793 Brassica carinata HOM05D005903 ORTHO05D007293 9.5e-91 337.4 255 65.9
A06p19990 Brassica napus HOM05D005903 ORTHO05D007293 9.5e-91 337.4 255 65.5
C03p71840 Brassica napus HOM05D005903 ORTHO05D007293 9.5e-91 337.4 255 65.9
BcaB01g00896 Brassica carinata HOM05D005903 ORTHO05D007293 1.6e-90 336.7 255 65.9
THA.LOC104824626 Tarenaya hassleriana HOM05D005903 ORTHO05D007293 3.6e-90 335.5 255 64.3
AL5G26920 Arabidopsis lyrata HOM05D005903 ORTHO05D007293 4.7e-90 335.1 255 64.7
MELO3C007010.2 Cucumis melo HOM05D005903 ORTHO05D007293 4.7e-90 335.1 258 64.0
CsaV3_6G052990 Cucumis sativus L. HOM05D005903 ORTHO05D007293 4.7e-90 335.1 258 64.3
ClCG01G025750 Citrullus lanatus HOM05D005903 ORTHO05D007293 8.1e-90 334.3 258 64.7
AUR62036920 Chenopodium quinoa HOM05D005903 ORTHO05D007293 1.1e-89 334.0 258 64.0
Sp1g31680 Schrenkiella parvula HOM05D005903 ORTHO05D007293 1.1e-89 334.0 255 63.1
Dinv26323 Davidia involucrata HOM05D005903 ORTHO05D007293 1.4e-89 333.6 228 72.8
TPR.G23817 Trifolium pratense HOM05D005903 ORTHO05D007293 1.4e-89 333.6 256 65.6
AUR62032162 Chenopodium quinoa HOM05D005903 ORTHO05D007293 3.1e-89 332.4 258 64.0
SGA_v2.0_scaffold31G12765 Striga asiatica HOM05D005903 ORTHO05D007293 4.0e-89 332.0 289 59.2
EL10Ac5g11217 Beta vulgaris HOM05D005903 ORTHO05D007293 1.2e-88 330.5 258 62.0
Haze_05254 Corylus avellana HOM05D005903 ORTHO05D007293 1.2e-88 330.5 234 70.9
Medtr4g094760 Medicago truncatula HOM05D005903 ORTHO05D007293 1.2e-88 330.5 256 62.5
Phvul.002G188100 Phaseolus vulgaris HOM05D005903 ORTHO05D007293 3.4e-88 328.9 256 63.7
CARHR156310 Cardamine hirsuta HOM05D005903 ORTHO05D007293 5.8e-88 328.2 255 63.1
Lsat_1_v5_gn_1_24420 Lactuca sativa HOM05D005903 ORTHO05D007293 7.6e-88 327.8 255 64.3
Glyma.08G089000 Glycine max HOM05D005903 ORTHO05D007293 1.3e-87 327.0 256 62.9
VMungo0251G1440 Vigna mungo HOM05D005903 ORTHO05D007293 1.3e-87 327.0 256 63.7
Ca_18231_v3 Cicer arietinum L. HOM05D005903 ORTHO05D007293 1.7e-87 326.6 256 63.3
ECA247G0018 Erigeron canadensis HOM05D005903 ORTHO05D007293 3.7e-87 325.5 256 65.2
Aa31LG9G16250 Aethionema arabicum HOM05D005903 ORTHO05D007293 4.9e-87 325.1 255 62.7
Glyma.05G134300 Glycine max HOM05D005903 ORTHO05D007293 1.1e-86 323.9 256 62.5
HanXRQChr12g0369311 Helianthus annuus HOM05D005903 ORTHO05D007293 2.4e-86 322.8 255 64.3
Aqoxy7G00859 Aquilegia oxysepala HOM05D005903 ORTHO05D007293 4.1e-86 322.0 255 63.5
ATR0605G282 Amborella trichopoda HOM05D005903 ORTHO05D007293 2.3e-84 316.2 254 61.4
Hund09980 Selenicereus undatus HOM05D005903 ORTHO05D007293 6.6e-84 314.7 305 55.7
arahy.Tifrunner.gnm1.ann1.7A7AL1 Arachis hypogaea HOM05D005903 ORTHO05D007293 1.9e-83 313.2 257 61.1
CSS0034787 Camellia sinensis var. sinensis HOM05D005903 ORTHO05D007293 5.6e-83 311.6 242 66.5
Sed0025041 Sechium edule HOM05D005903 ORTHO05D007293 2.1e-82 309.7 255 62.0
Dinv01020 Davidia involucrata HOM05D005903 ORTHO05D007293 4.4e-80 302.0 255 62.7
TWI63G1157 Tripterygium wilfordii HOM05D005903 ORTHO05D007293 7.6e-80 301.2 256 62.1
PSO675G2002 Papaver somniferum HOM05D005903 ORTHO05D007293 8.1e-74 281.2 258 56.2
HPP92_021274 Vanilla planifolia HOM05D005903 ORTHO05D007293 7.1e-70 268.1 255 56.1
Psat7g087640 Pisum sativum HOM05D005903 ORTHO05D007293 3.6e-66 255.8 187 65.8
SEGI_28167 Sequoiadendron giganteum HOM05D005903 ORTHO05D007293 1.1e-65 254.2 255 51.8
Prupe.7G025500 Prunus persica HOM05D005903 ORTHO05D007293 1.3e-63 247.3 159 76.1
CDE06G1059 Ceratophyllum demersum HOM05D005903 ORTHO05D007293 2.1e-61 240.0 263 50.2
arahy.Tifrunner.gnm1.ann1.STP4KF Arachis hypogaea HOM05D005903 ORTHO05D007293 3.7e-58 229.2 254 50.0
AagrBONN_evm.TU.Sc2ySwM_344.2832 Anthoceros agrestis HOM05D005903 ORTHO05D007293 7.6e-56 221.5 255 46.7
SMO367G0859 Selaginella moellendorffii HOM05D005903 ORTHO05D007293 5.7e-51 205.3 260 44.2
Os11g0549650 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 7.4e-51 204.9 153 63.4
Zm00001eb201720 Zea mays HOM05D005903 ORTHO05D007293 1.3e-50 204.1 150 65.3
Mapoly0019s0171 Marchantia polymorpha HOM05D005903 ORTHO05D007293 3.7e-50 202.6 258 42.2
Pp3c7_4190 Physcomitrium patens HOM05D005903 ORTHO05D007293 6.3e-50 201.8 259 42.1
COL.COLO4_05791 Corchorus olitorius HOM05D005903 ORTHO05D007293 1.8e-49 200.3 117 81.2
Sc04g0004130 Simmondsia chinensis HOM05D005903 ORTHO05D007293 2.0e-48 196.8 169 60.9
unitig_46.g18341 Utricularia gibba HOM05D005903 ORTHO05D007293 1.9e-46 190.3 256 45.3
Lalb_Chr07g0188231 Lupinus albus HOM05D005903 ORTHO05D007293 3.5e-45 186.0 117 75.2
Haze_05249 Corylus avellana HOM05D005903 ORTHO05D007293 1.0e-39 167.9 200 54.0
Lalb_Chr07g0188221 Lupinus albus HOM05D005903 ORTHO05D007293 3.6e-37 159.5 141 54.6
CAN.G508.15 Capsicum annuum HOM05D005903 ORTHO05D007293 3.7e-34 149.4 245 41.2
Oeu056062.1 Olea europaea HOM05D005903 ORTHO05D007293 6.3e-34 148.7 90 80.0
Cfa024540 Carpinus fangiana HOM05D005903 ORTHO05D007293 3.1e-33 146.4 280 33.9
Gohir.D11G050975 Gossypium hirsutum HOM05D005903 ORTHO05D007293 9.1e-33 144.8 133 57.1
CARHR106840 Cardamine hirsuta HOM05D005903 ORTHO05D007293 3.6e-29 132.9 120 55.8
Os11g0549690 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 2.6e-27 126.7 89 64.0
Cre10.g436900 Chlamydomonas reinhardtii HOM05D005903 ORTHO05D007293 9.7e-27 124.8 269 33.5
MCO11G061 Micromonas commoda HOM05D005903 ORTHO05D007293 5.9e-24 115.5 269 32.3
CBR_g23454 Chara braunii HOM05D001496 ORTHO05D007453 6.5e-23 112.1 144 42.4
COL.COLO4_05792 Corchorus olitorius HOM05D005903 ORTHO05D007293 2.6e-19 100.1 78 61.5
Glyma.08G193350 Glycine max HOM05D005903 ORTHO05D007293 3.7e-18 96.3 60 76.7
PRCOL_00001260 Prasinoderma coloniale HOM05D005903 ORTHO05D007293 5.9e-16 89.0 281 28.5
Migut.O00470 Erythranthe guttata HOM05D005903 ORTHO05D007293 2.9e-15 86.7 107 47.7
Oeu056063.2 Olea europaea HOM05D007234 ORTHO05D008488 1.9e-14 84.0 65 64.6
Sc04g0004120 Simmondsia chinensis HOM05D005903 ORTHO05D007293 1.9e-14 84.0 48 75.0
Cfa001138 Carpinus fangiana HOM05D000398 ORTHO05D000551 3.1e-09 66.6 60 53.3
CBR_g8146 Chara braunii HOM05D005903 ORTHO05D000048 4.5e-08 62.8 65 47.7


User provided reference genes

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