Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g026210 Solanum pennellii HOM05D014199 ORTHO05D014309 0.0e+00 1557.3 799 100.0
Solyc02g081590.3 Solanum lycopersicum HOM05D014199 ORTHO05D014309 0.0e+00 1487.2 799 95.1
PGSC0003DMG400017731 Solanum tuberosum HOM05D014199 ORTHO05D014309 0.0e+00 1348.2 825 85.2
CAN.G809.74 Capsicum annuum HOM05D014199 ORTHO05D014309 7.5e-203 711.4 897 51.2
Peaxi162Scf00344g00159 Petunia axillaris HOM05D014199 ORTHO05D014309 2.5e-137 493.8 1059 37.3
Nitab4.5_0006392g0080 Nicotiana tabacum HOM05D014199 ORTHO05D014309 5.5e-129 466.1 860 43.3
Nitab4.5_0006976g0020 Nicotiana tabacum HOM05D014199 ORTHO05D014309 2.1e-120 437.6 925 40.0
Nitab4.5_0000817g0030 Nicotiana tabacum HOM05D014199 ORTHO05D014309 2.4e-52 211.5 221 50.2
Nitab4.5_0004024g0020 Nicotiana tabacum HOM05D014199 ORTHO05D014309 4.3e-49 200.7 186 54.8
Peaxi162Scf00784g00410 Petunia axillaris HOM05D014199 ORTHO05D014309 2.2e-45 188.3 182 51.1
Nn3g18650 Nelumbo nucifera HOM05D001642 ORTHO05D014309 4.8e-16 90.9 195 28.2
SalBow7G1041 Salvia bowleyana HOM05D001642 ORTHO05D002129 3.4e-14 84.7 178 32.6
Aqoxy2G01354 Aquilegia oxysepala HOM05D001642 ORTHO05D002129 4.5e-14 84.3 182 28.6
Solyc10g006770.4 Solanum lycopersicum HOM05D001642 ORTHO05D002129 4.5e-14 84.3 204 28.9
Sopen10g002690 Solanum pennellii HOM05D001642 ORTHO05D002129 2.9e-13 81.6 204 28.4
PGSC0003DMG400025001 Solanum tuberosum HOM05D001642 ORTHO05D002129 2.9e-13 81.6 204 28.4
CAN.G1110.39 Capsicum annuum HOM05D001642 ORTHO05D002129 3.2e-12 78.2 204 27.9
TAR365G0482 Trochodendron aralioides HOM05D001642 ORTHO05D002129 3.2e-12 78.2 180 28.3
TAR365G0965 Trochodendron aralioides HOM05D001642 ORTHO05D002129 3.2e-12 78.2 180 28.3
TAR365G0980 Trochodendron aralioides HOM05D001642 ORTHO05D002129 3.2e-12 78.2 180 28.3
ATR0982G001 Amborella trichopoda HOM05D001642 ORTHO05D002129 4.2e-12 77.8 172 29.7
SGA_v2.0_scaffold104G30153 Striga asiatica HOM05D001642 ORTHO05D002129 7.2e-12 77.0 181 28.2
Nn3g18368 Nelumbo nucifera HOM05D001642 ORTHO05D002129 9.4e-12 76.6 182 28.6
Oeu061926.1 Olea europaea HOM05D001642 ORTHO05D002129 1.2e-11 76.3 197 28.4
Gohir.A11G275000 Gossypium hirsutum HOM05D001642 ORTHO05D002129 1.6e-11 75.9 181 29.8
Thecc.05G327700 Theobroma cacao HOM05D001642 ORTHO05D002129 1.6e-11 75.9 183 28.4
MELO3C007085.2 Cucumis melo HOM05D001642 ORTHO05D002129 3.6e-11 74.7 180 26.7
CsaV3_6G052250 Cucumis sativus L. HOM05D001642 ORTHO05D002129 3.6e-11 74.7 180 26.7
TPR.G26670 Trifolium pratense HOM05D001642 ORTHO05D002129 6.1e-11 73.9 178 28.1
Gohir.D11G285400 Gossypium hirsutum HOM05D001642 ORTHO05D002129 8.0e-11 73.6 181 29.3
Gorai.007G308600 Gossypium raimondii HOM05D001642 ORTHO05D002129 1.4e-10 72.8 181 29.3
Manes.04G151800 Manihot esculenta HOM05D001642 ORTHO05D002129 3.0e-10 71.6 169 33.1
Gohir.A13G177400 Gossypium hirsutum HOM05D001642 ORTHO05D002129 5.2e-10 70.9 183 29.5
TWI34G1342 Tripterygium wilfordii HOM05D001642 ORTHO05D002129 6.7e-10 70.5 182 28.0
Migut.B00861 Erythranthe guttata HOM05D001642 ORTHO05D002129 8.8e-10 70.1 280 25.0
Sed0012617 Sechium edule HOM05D001642 ORTHO05D002129 8.8e-10 70.1 180 26.1
Sed0013603 Sechium edule HOM05D001642 ORTHO05D002129 8.8e-10 70.1 181 26.5
CSS0028187 Camellia sinensis var. sinensis HOM05D001642 ORTHO05D002129 1.1e-09 69.7 182 29.7
CDE12G0244 Ceratophyllum demersum HOM05D001642 ORTHO05D002129 1.5e-09 69.3 197 26.9
CSS0002490 Camellia sinensis var. sinensis HOM05D001642 ORTHO05D002129 2.0e-09 68.9 182 29.7
ClCG01G025060 Citrullus lanatus HOM05D001642 ORTHO05D002129 2.0e-09 68.9 175 26.9
Gohir.D13G184000 Gossypium hirsutum HOM05D001642 ORTHO05D002129 2.0e-09 68.9 183 26.8
Gorai.013G209300 Gossypium raimondii HOM05D001642 ORTHO05D002129 2.0e-09 68.9 183 26.8
Psat3g019760 Pisum sativum HOM05D001642 ORTHO05D002129 2.0e-09 68.9 192 28.6
Dinv24498 Davidia involucrata HOM05D001642 ORTHO05D002129 2.6e-09 68.6 180 28.9
Carub.0006s2948 Capsella rubella HOM05D001642 ORTHO05D002129 3.3e-09 68.2 180 27.2
Ciclev10010953m.g Citrus clementina HOM05D001642 ORTHO05D002129 3.3e-09 68.2 173 27.7
Actinidia35499 Actinidia chinensis HOM05D001642 ORTHO05D002129 4.4e-09 67.8 182 26.4
SEGI_07934 Sequoiadendron giganteum HOM05D001642 ORTHO05D002129 4.4e-09 67.8 151 29.1
Actinidia16891 Actinidia chinensis HOM05D001642 ORTHO05D002129 1.3e-08 66.2 180 27.2
Migut.N00964 Erythranthe guttata HOM05D001642 ORTHO05D002129 1.7e-08 65.9 158 32.3
Oeu060659.1 Olea europaea HOM05D001642 ORTHO05D002129 2.2e-08 65.5 111 36.9
Atru.chr2.1956 Acer truncatum HOM05D001642 ORTHO05D002129 2.8e-08 65.1 182 26.9
TWI32G0544 Tripterygium wilfordii HOM05D001642 ORTHO05D002129 2.8e-08 65.1 182 28.0
Dinv30930 Davidia involucrata HOM05D001642 ORTHO05D002129 3.7e-08 64.7 180 28.3
CARHR255890 Cardamine hirsuta HOM05D001642 ORTHO05D002129 4.8e-08 64.3 199 27.1
Lj5C321T11 Lonicera japonica HOM05D001642 ORTHO05D002129 4.8e-08 64.3 182 25.8
Actinidia16892 Actinidia chinensis HOM05D001642 ORTHO05D002129 6.3e-08 63.9 178 27.0
unitig_62.g23641 Utricularia gibba HOM05D001642 ORTHO05D002129 8.2e-08 63.5 181 26.0
Lj5C321T4 Lonicera japonica HOM05D001642 ORTHO05D002129 1.1e-07 63.2 180 27.2
BraA03t12104Z Brassica rapa HOM05D001642 ORTHO05D002129 1.4e-07 62.8 180 24.4
PSO017G1336 Papaver somniferum HOM05D001642 ORTHO05D002129 1.4e-07 62.8 201 25.9
Aqoxy3G04263 Aquilegia oxysepala HOM05D001642 ORTHO05D014309 1.8e-07 62.4 104 30.8
BcaC01g04665 Brassica carinata HOM05D001642 ORTHO05D002129 1.8e-07 62.4 180 24.4
A03p29090 Brassica napus HOM05D001642 ORTHO05D002129 1.8e-07 62.4 180 24.4
BolC3t15827H Brassica oleracea HOM05D001642 ORTHO05D002129 1.8e-07 62.4 180 24.4
COL.COLO4_15580 Corchorus olitorius HOM05D001642 ORTHO05D002129 2.4e-07 62.0 140 29.3
C03p35150 Brassica napus HOM05D001642 ORTHO05D002129 3.1e-07 61.6 180 24.4
Aqoxy7G02712 Aquilegia oxysepala HOM05D001642 ORTHO05D014309 4.1e-07 61.2 113 33.6
PSO676G0006 Papaver somniferum HOM05D001642 ORTHO05D002129 5.3e-07 60.8 181 28.2
Cc02_g35560 Coffea canephora HOM05D001642 ORTHO05D002129 9.1e-07 60.1 183 25.1
PSO170G0832 Papaver somniferum HOM05D001642 ORTHO05D002129 9.1e-07 60.1 81 40.7
Rhsim11G0099900 Rhododendron simsii HOM05D001642 ORTHO05D002129 1.2e-06 59.7 180 25.0
Manes.08G108300 Manihot esculenta HOM05D001642 ORTHO05D002129 2.0e-06 58.9 151 28.5
RcHm_v2.0_Chr3g0460191 Rosa chinensis HOM05D001642 ORTHO05D002129 3.5e-06 58.2 190 23.7
Actinidia17130 Actinidia chinensis HOM05D014199 ORTHO05D014309 4.5e-06 57.8 70 40.0


User provided reference genes

Program Settings