Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g025470 Solanum pennellii HOM05D006957 ORTHO05D008647 6.5e-154 547.4 277 100.0
Solyc02g080780.3 Solanum lycopersicum HOM05D006957 ORTHO05D008647 2.7e-152 542.0 277 98.6
CAN.G1014.10 Capsicum annuum HOM05D006957 ORTHO05D008647 5.0e-146 521.2 277 94.9
PGSC0003DMG400016446 Solanum tuberosum HOM05D006957 ORTHO05D008647 5.5e-145 517.7 270 97.4
Nitab4.5_0007963g0030 Nicotiana tabacum HOM05D006957 ORTHO05D008647 2.4e-132 475.7 277 88.4
Peaxi162Scf00178g01715 Petunia axillaris HOM05D006957 ORTHO05D008647 1.1e-129 466.8 270 88.5
Nitab4.5_0002695g0060 Nicotiana tabacum HOM05D006957 ORTHO05D008647 1.6e-128 463.0 277 85.2
Dinv13912 Davidia involucrata HOM05D006957 ORTHO05D008647 1.9e-108 396.4 276 72.5
Lj1A1232T100 Lonicera japonica HOM05D006957 ORTHO05D008647 2.8e-104 382.5 277 69.7
Cc09_g01500 Coffea canephora HOM05D006957 ORTHO05D008647 1.1e-103 380.6 278 69.4
Migut.M01335 Erythranthe guttata HOM05D006957 ORTHO05D008647 6.8e-103 377.9 276 71.0
MSTRG.7198 Avicennia marina HOM05D006957 ORTHO05D008647 8.4e-101 370.9 275 69.5
Ciclev10016210m.g Citrus clementina HOM05D006957 ORTHO05D008647 1.1e-100 370.5 276 69.2
QL05p072698 Quercus lobata HOM05D006957 ORTHO05D008647 1.6e-99 366.7 278 68.0
Atru.chr10.2253 Acer truncatum HOM05D006957 ORTHO05D008647 3.5e-99 365.5 282 67.4
SGA_v2.0_scaffold4G01906 Striga asiatica HOM05D006957 ORTHO05D008647 4.6e-99 365.2 264 72.3
Potri.011G006700 Populus trichocarpa HOM05D006957 ORTHO05D008647 1.3e-98 363.6 267 68.9
vmacro15796 Vaccinium macrocarpon HOM05D006957 ORTHO05D008647 5.1e-98 361.7 267 69.7
Manes.17G025800 Manihot esculenta HOM05D006957 ORTHO05D008647 6.6e-98 361.3 267 68.2
Gohir.A06G149100 Gossypium hirsutum HOM05D006957 ORTHO05D008647 1.5e-97 360.1 276 67.0
FvH4_3g43300 Fragaria vesca HOM05D006957 ORTHO05D008647 7.3e-97 357.8 277 68.6
AUR62021927 Chenopodium quinoa HOM05D006957 ORTHO05D008647 1.2e-96 357.1 278 66.9
Gohir.D06G155200 Gossypium hirsutum HOM05D006957 ORTHO05D008647 1.6e-96 356.7 270 67.4
AUR62012727 Chenopodium quinoa HOM05D006957 ORTHO05D008647 1.4e-95 353.6 278 66.9
CSS0002589 Camellia sinensis var. sinensis HOM05D006957 ORTHO05D008647 2.4e-95 352.8 276 67.0
FAN16G3059 Fragaria x ananassa HOM05D006957 ORTHO05D008647 6.8e-95 351.3 285 67.0
FAN25G2833 Fragaria x ananassa HOM05D006957 ORTHO05D008647 6.8e-95 351.3 292 66.1
HanXRQChr16g0515501 Helianthus annuus HOM05D006957 ORTHO05D008647 6.8e-95 351.3 277 67.5
RcHm_v2.0_Chr5g0077361 Rosa chinensis HOM05D006957 ORTHO05D008647 8.9e-95 350.9 278 67.3
Cfa000203 Carpinus fangiana HOM05D006957 ORTHO05D008647 2.0e-94 349.7 258 70.9
COL.COLO4_31796 Corchorus olitorius HOM05D006957 ORTHO05D008647 2.0e-94 349.7 269 67.7
TWI38G1647 Tripterygium wilfordii HOM05D006957 ORTHO05D008647 2.6e-94 349.4 268 66.4
VMungo1215G0309 Vigna mungo HOM05D006957 ORTHO05D008647 3.4e-94 349.0 279 64.5
FAN11G3374 Fragaria x ananassa HOM05D006957 ORTHO05D008647 5.8e-94 348.2 292 65.4
DCAR_028192 Daucus carota HOM05D006957 ORTHO05D008647 7.6e-94 347.8 269 68.4
GSVIVG01012704001 Vitis vinifera HOM05D006957 ORTHO05D008647 9.9e-94 347.4 236 73.7
FAN21G2957 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.7e-93 346.7 292 66.1
Glyma.07G262000 Glycine max HOM05D006957 ORTHO05D008647 2.2e-93 346.3 277 63.9
Glyma.17G012100 Glycine max HOM05D006957 ORTHO05D008647 2.2e-93 346.3 281 64.8
Prupe.6G022000 Prunus persica HOM05D006957 ORTHO05D008647 2.2e-93 346.3 264 70.5
EL10Ac8g20084 Beta vulgaris HOM05D006957 ORTHO05D008647 4.9e-93 345.1 275 66.9
Phvul.003G080300 Phaseolus vulgaris HOM05D006957 ORTHO05D008647 4.2e-92 342.0 279 63.8
ClCG01G021850 Citrullus lanatus HOM05D006957 ORTHO05D008647 9.3e-92 340.9 282 64.5
CsaV3_6G048910 Cucumis sativus L. HOM05D006957 ORTHO05D008647 1.2e-91 340.5 281 63.7
ECA234G3681 Erigeron canadensis HOM05D006957 ORTHO05D008647 2.1e-91 339.7 268 67.2
Lsat_1_v5_gn_4_59280 Lactuca sativa HOM05D006957 ORTHO05D008647 2.1e-91 339.7 274 66.4
MELO3C007402.2 Cucumis melo HOM05D006957 ORTHO05D008647 3.5e-91 339.0 280 63.6
unitig_748.g7953 Utricularia gibba HOM05D006957 ORTHO05D008647 4.6e-91 338.6 225 73.8
Gorai.010G181400 Gossypium raimondii HOM05D006957 ORTHO05D008647 1.0e-90 337.4 263 66.2
Sed0022215 Sechium edule HOM05D006957 ORTHO05D008647 1.0e-90 337.4 276 63.4
Thecc.06G223400 Theobroma cacao HOM05D006957 ORTHO05D008647 1.0e-90 337.4 237 72.6
Lj4g0000977 Lotus japonicus HOM05D006957 ORTHO05D008647 1.3e-90 337.0 198 81.3
CANSAT56G0113 Cannabis sativa HOM05D006957 ORTHO05D008647 3.0e-90 335.9 280 64.3
Eucgr.L02772 Eucalyptus grandis HOM05D006957 ORTHO05D008647 3.0e-90 335.9 270 65.9
arahy.Tifrunner.gnm1.ann1.VHEB9D Arachis hypogaea HOM05D006957 ORTHO05D008647 5.1e-90 335.1 281 66.2
PGR042G2408 Punica granatum HOM05D006957 ORTHO05D008647 6.6e-90 334.7 267 64.4
Hund21421 Selenicereus undatus HOM05D006957 ORTHO05D008647 6.6e-90 334.7 282 64.2
arahy.Tifrunner.gnm1.ann1.SK97UM Arachis hypogaea HOM05D006957 ORTHO05D008647 1.1e-89 334.0 281 65.8
MBI18_g04903_MAGBIO Magnolia biondii HOM05D006957 ORTHO05D008647 1.5e-89 333.6 281 63.0
TAR629G0592 Trochodendron aralioides HOM05D006957 ORTHO05D008647 1.5e-89 333.6 278 62.9
Medtr4g132350 Medicago truncatula HOM05D006957 ORTHO05D008647 4.3e-89 332.0 277 63.5
Eucgr.E03906 Eucalyptus grandis HOM05D006957 ORTHO05D008647 9.6e-89 330.9 268 65.7
SalBow8G2851 Salvia bowleyana HOM05D006957 ORTHO05D008647 1.3e-88 330.5 185 85.4
Lalb_Chr07g0177131 Lupinus albus HOM05D006957 ORTHO05D008647 8.1e-88 327.8 290 62.8
Aqoxy4G01856 Aquilegia oxysepala HOM05D006957 ORTHO05D008647 2.4e-87 326.2 197 78.7
Rhsim02G0105900 Rhododendron simsii HOM05D006957 ORTHO05D008647 3.1e-87 325.9 274 65.0
Haze_06820 Corylus avellana HOM05D006957 ORTHO05D008647 5.3e-87 325.1 285 62.8
TPR.G29296 Trifolium pratense HOM05D006957 ORTHO05D008647 5.3e-87 325.1 285 61.8
Actinidia11860 Actinidia chinensis HOM05D006957 ORTHO05D008647 1.5e-86 323.6 280 62.9
THA.LOC104818712 Tarenaya hassleriana HOM05D006957 ORTHO05D008647 1.5e-86 323.6 278 63.3
MD11G1027900 Malus domestica HOM05D006957 ORTHO05D008647 2.6e-86 322.8 256 66.4
Duzib160G0853 Durio zibethinus HOM05D006957 ORTHO05D008647 4.4e-86 322.0 277 62.1
Sabra04G0005100 Salix brachista HOM05D006957 ORTHO05D008647 5.8e-86 321.6 297 57.9
QL02p099916 Quercus lobata HOM05D006957 ORTHO05D008647 1.1e-84 317.4 183 83.6
Psat4g006040 Pisum sativum HOM05D006957 ORTHO05D008647 4.2e-84 315.5 222 71.2
PSO832G3220 Papaver somniferum HOM05D006957 ORTHO05D008647 3.5e-83 312.4 206 72.8
Thhalv10023639m.g Eutrema salsugineum HOM05D006957 ORTHO05D008647 1.0e-82 310.8 197 76.1
Ah.09g234750 Amaranthus hybridus HOM05D006957 ORTHO05D008647 1.7e-82 310.1 272 59.2
Carub.0002s0276 Capsella rubella HOM05D006957 ORTHO05D008647 5.1e-82 308.5 196 76.0
Sp2g02390 Schrenkiella parvula HOM05D006957 ORTHO05D008647 1.5e-81 307.0 196 76.5
AL2G13680 Arabidopsis lyrata HOM05D006957 ORTHO05D008647 2.5e-81 306.2 197 75.1
BcaC02g10501 Brassica carinata HOM05D006957 ORTHO05D008647 5.6e-81 305.1 196 75.5
C04p28180 Brassica napus HOM05D006957 ORTHO05D008647 5.6e-81 305.1 196 75.5
BolC4t24361H Brassica oleracea HOM05D006957 ORTHO05D008647 5.6e-81 305.1 196 75.5
BolC4t24891H Brassica oleracea HOM05D006957 ORTHO05D008647 7.4e-81 304.7 196 75.5
Duzib192G0359 Durio zibethinus HOM05D006957 ORTHO05D008647 3.6e-80 302.4 207 71.0
Ca_21073_v3 Cicer arietinum L. HOM05D006957 ORTHO05D008647 4.8e-80 302.0 190 76.3
BcaC06g31885 Brassica carinata HOM05D006957 ORTHO05D008647 6.2e-80 301.6 232 67.2
AT1G62250 Arabidopsis thaliana HOM05D006957 ORTHO05D008647 2.4e-79 299.7 197 73.1
Os03g0744700 Oryza sativa ssp. japonica HOM05D006957 ORTHO05D008647 4.0e-79 298.9 268 59.0
ATR0794G153 Amborella trichopoda HOM05D006957 ORTHO05D008647 1.3e-77 293.9 182 76.4
CiPaw.09G093600 Carya illinoinensis HOM05D006957 ORTHO05D008647 3.0e-74 282.7 213 68.5
CDE05G2181 Ceratophyllum demersum HOM05D006957 ORTHO05D008647 3.0e-74 282.7 195 69.2
Nn1g07184 Nelumbo nucifera HOM05D006957 ORTHO05D008647 5.1e-74 282.0 276 57.2
Zm00001eb056950 Zea mays HOM05D006957 ORTHO05D008647 1.9e-73 280.0 275 54.5
Sc05g0009300 Simmondsia chinensis HOM05D006957 ORTHO05D008647 9.0e-71 271.2 246 58.9
A03p67500 Brassica napus HOM05D006957 ORTHO05D008647 1.2e-70 270.8 180 74.4
BraA01t02718Z Brassica rapa HOM05D006957 ORTHO05D008647 1.2e-70 270.8 180 74.4
BcaC02g10063 Brassica carinata HOM05D006957 ORTHO05D008647 2.0e-70 270.0 219 64.4
Mapoly0071s0090 Marchantia polymorpha HOM05D006957 ORTHO05D008647 5.3e-63 245.4 215 58.1
Pp3c10_11430 Physcomitrium patens HOM05D006957 ORTHO05D008647 8.5e-61 238.0 214 54.7
CiPaw.10G072800 Carya illinoinensis HOM05D006957 ORTHO05D008647 5.1e-50 202.2 119 83.2
C04p33270 Brassica napus HOM05D006957 ORTHO05D008647 2.6e-49 199.9 139 69.1
SMO347G0662 Selaginella moellendorffii HOM05D006957 ORTHO05D008647 1.7e-48 197.2 190 53.2
Oeu051204.1 Olea europaea HOM05D006957 ORTHO05D008647 4.5e-46 189.1 103 84.5
arahy.Tifrunner.gnm1.ann1.EAEB6D Arachis hypogaea HOM05D006957 ORTHO05D008647 7.5e-33 145.2 93 74.2
TAR627G0415 Trochodendron aralioides HOM05D006957 ORTHO05D008647 1.9e-28 130.6 81 79.0
Dinv20064 Davidia involucrata HOM05D006957 ORTHO05D008647 3.0e-26 123.2 159 47.8
SEGI_02842 Sequoiadendron giganteum HOM05D006957 ORTHO05D008647 4.5e-22 109.4 86 61.6
CiPaw.10G072900 Carya illinoinensis HOM05D006957 ORTHO05D008647 1.2e-19 101.3 122 48.4
Cre02.g141850 Chlamydomonas reinhardtii HOM05D006957 ORTHO05D008647 2.2e-16 90.5 192 30.7
AagrBONN_evm.TU.Sc2ySwM_228.4491 Anthoceros agrestis HOM05D006957 ORTHO05D008647 3.5e-14 83.2 116 42.2
PRCOL_00005158 Prasinoderma coloniale HOM05D006957 ORTHO05D008647 3.0e-10 70.1 176 30.7
Cpa.g.sc1199.4 Carica papaya HOM05D006957 ORTHO05D008647 8.3e-08 62.0 33 90.9


User provided reference genes

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