Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g025300 Solanum pennellii HOM05D007037 ORTHO05D006691 6.7e-33 143.7 85 100.0
PGSC0003DMG400016450 Solanum tuberosum HOM05D007037 ORTHO05D006691 4.0e-30 134.4 85 92.9
Nitab4.5_0005074g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 2.4e-27 125.2 85 76.5
Nitab4.5_0002827g0030 Nicotiana tabacum HOM05D007037 ORTHO05D006691 4.6e-26 120.9 85 72.9
Solyc02g080600.1 Solanum lycopersicum HOM05D007037 ORTHO05D006691 5.8e-21 104.0 66 97.0
Nitab4.5_0009030g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 4.6e-18 94.4 82 62.2
Dinv13899 Davidia involucrata HOM05D001191 ORTHO05D000979 2.3e-17 92.0 82 59.8
Nitab4.5_0000005g0340 Nicotiana tabacum HOM05D007037 ORTHO05D006691 5.1e-17 90.9 82 59.8
Peaxi162Scf00331g00119 Petunia axillaris HOM05D007037 ORTHO05D006691 6.7e-17 90.5 82 74.4
CSS0026389 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 6.3e-15 84.0 78 55.1
Oeu025269.1 Olea europaea HOM05D007037 ORTHO05D006691 1.8e-14 82.4 82 53.7
DCAR_008156 Daucus carota HOM05D007037 ORTHO05D006691 9.0e-14 80.1 80 53.8
Cc09_g01610 Coffea canephora HOM05D007037 ORTHO05D006691 1.2e-13 79.7 82 52.4
Prupe.4G019700 Prunus persica HOM05D007037 ORTHO05D006691 4.5e-13 77.8 82 47.6
QL05p073032 Quercus lobata HOM05D007037 ORTHO05D006691 5.9e-13 77.4 84 50.0
Hma1.2p1_0749F.1_g212630 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 7.7e-13 77.0 82 54.9
Hma1.2p1_0749F.1_g212635 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 7.7e-13 77.0 82 54.9
MD10G1322200 Malus domestica HOM05D007037 ORTHO05D006691 7.7e-13 77.0 82 47.6
CSS0006945 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 1.0e-12 76.6 79 53.2
Potri.004G013601 Populus trichocarpa HOM05D007037 ORTHO05D006691 2.9e-12 75.1 79 50.6
Potri.011G004400 Populus trichocarpa HOM05D007037 ORTHO05D006691 6.5e-12 73.9 84 51.2
SalBow8G3366 Salvia bowleyana HOM05D007037 ORTHO05D006691 8.5e-12 73.6 70 60.0
MD05G1347800 Malus domestica HOM05D007037 ORTHO05D006691 1.1e-11 73.2 79 46.8
Manes.16G006400 Manihot esculenta HOM05D007037 ORTHO05D006691 1.1e-11 73.2 79 50.6
Sopen02g011150 Solanum pennellii HOM05D007037 ORTHO05D006691 1.1e-11 73.2 80 47.5
CiPaw.09G092600 Carya illinoinensis HOM05D007037 ORTHO05D006691 1.4e-11 72.8 79 48.1
Atru.chr10.2236 Acer truncatum HOM05D007037 ORTHO05D006691 1.9e-11 72.4 79 48.1
TAR624G1029 Trochodendron aralioides HOM05D007037 ORTHO05D006691 1.9e-11 72.4 84 46.4
Peaxi162Scf01204g00120 Petunia axillaris HOM05D007037 ORTHO05D006691 3.2e-11 71.6 82 48.8
Gohir.A05G170900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 4.2e-11 71.2 82 46.3
RcHm_v2.0_Chr5g0002881 Rosa chinensis HOM05D007037 ORTHO05D006691 4.2e-11 71.2 79 44.3
Manes.01G159201 Manihot esculenta HOM05D007037 ORTHO05D006691 5.5e-11 70.9 79 49.4
Eucgr.E04050 Eucalyptus grandis HOM05D007037 ORTHO05D006691 7.2e-11 70.5 82 48.8
Thecc.06G221700 Theobroma cacao HOM05D007037 ORTHO05D006691 9.4e-11 70.1 82 48.8
COL.COLO4_00342 Corchorus olitorius HOM05D007037 ORTHO05D006691 1.2e-10 69.7 82 47.6
Lsat_1_v5_gn_4_60821 Lactuca sativa HOM05D007037 ORTHO05D006691 1.6e-10 69.3 84 45.2
FAN25G2740 Fragaria x ananassa HOM05D007037 ORTHO05D006691 2.1e-10 68.9 79 48.1
ECA234G0681 Erigeron canadensis HOM05D007037 ORTHO05D006691 3.6e-10 68.2 80 47.5
Gohir.D05G173900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 4.6e-10 67.8 82 43.9
Gorai.009G179200 Gossypium raimondii HOM05D007037 ORTHO05D006691 4.6e-10 67.8 82 43.9
PGSC0003DMG400019869 Solanum tuberosum HOM05D007037 ORTHO05D006691 4.6e-10 67.8 77 48.1
FAN21G2981 Fragaria x ananassa HOM05D001191 ORTHO05D000979 7.9e-10 67.0 79 43.0
CsaV3_6G049020 Cucumis sativus L. HOM05D007037 ORTHO05D006691 1.0e-09 66.6 81 49.4
ClCG01G021940 Citrullus lanatus HOM05D007037 ORTHO05D006691 2.3e-09 65.5 82 50.0
Duzib192G0147 Durio zibethinus HOM05D007037 ORTHO05D006691 2.3e-09 65.5 82 45.1
Aqoxy1G02111 Aquilegia oxysepala HOM05D007037 ORTHO05D006691 3.9e-09 64.7 78 44.9
Medtr2g023440 Medicago truncatula HOM05D007037 ORTHO05D006691 3.9e-09 64.7 82 41.5
TPR.G13436 Trifolium pratense HOM05D007037 ORTHO05D006691 5.1e-09 64.3 83 41.0
Sed0008683 Sechium edule HOM05D007037 ORTHO05D006691 1.9e-08 62.4 82 46.3
FvH4_3g01970 Fragaria vesca HOM05D007037 ORTHO05D006691 2.5e-08 62.0 79 53.2
vmacro23211 Vaccinium macrocarpon HOM05D007037 ORTHO05D006691 3.3e-08 61.6 85 42.4
Cc05_g04380 Coffea canephora HOM05D007037 ORTHO05D006691 2.8e-07 58.5 82 42.7
Sed0010286 Sechium edule HOM05D007037 ORTHO05D006691 3.7e-07 58.2 81 44.4
arahy.Tifrunner.gnm1.ann1.CZMF37 Arachis hypogaea HOM05D007037 ORTHO05D006691 2.4e-06 55.5 79 38.0
arahy.Tifrunner.gnm1.ann1.98H95S Arachis hypogaea HOM05D007037 ORTHO05D006691 5.3e-06 54.3 80 40.0
Ca_26471_v3 Cicer arietinum L. HOM05D007037 ORTHO05D006691 5.3e-06 54.3 84 36.9
Glyma.17G012900 Glycine max HOM05D007037 ORTHO05D006691 5.3e-06 54.3 82 42.7
Actinidia09718 Actinidia chinensis HOM05D007037 ORTHO05D006691 9.1e-06 53.5 83 38.6
Gohir.D13G171533 Gossypium hirsutum HOM05D007037 ORTHO05D006691 9.1e-06 53.5 82 42.7
Sabra11G0003500 Salix brachista HOM05D007037 ORTHO05D006691 9.1e-06 53.5 79 39.2


User provided reference genes

Program Settings