Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g024810 Solanum pennellii HOM05D002065 ORTHO05D002050 1.5e-104 382.9 192 100.0
PGSC0003DMG400002090 Solanum tuberosum HOM05D002065 ORTHO05D002050 1.6e-98 362.8 192 94.8
Oeu037342.1 Olea europaea HOM05D002065 ORTHO05D002050 4.1e-30 135.6 190 42.1
Oeu051228.1 Olea europaea HOM05D002065 ORTHO05D002050 1.1e-27 127.5 183 43.2
CSS0011499 Camellia sinensis var. sinensis HOM05D002065 ORTHO05D002050 1.2e-26 124.0 190 36.8
TAR626G1859 Trochodendron aralioides HOM05D002065 ORTHO05D002050 2.1e-26 123.2 192 38.0
Cfa021640 Carpinus fangiana HOM05D002065 ORTHO05D002050 1.1e-22 110.9 147 40.8
CiPaw.09G086500 Carya illinoinensis HOM05D002065 ORTHO05D002050 1.2e-21 107.5 180 38.9
Oeu037345.1 Olea europaea HOM05D002065 ORTHO05D002050 1.6e-21 107.1 114 50.9
Hma1.2p1_0729F.1_g209600 Hydrangea macrophylla HOM05D002065 ORTHO05D002050 2.7e-21 106.3 192 35.9
SGA_v2.0_scaffold7G03888 Striga asiatica HOM05D002065 ORTHO05D002050 3.5e-21 105.9 192 36.5
Nn1g03650 Nelumbo nucifera HOM05D002065 ORTHO05D002050 7.7e-21 104.8 187 34.8
TWI38G1606 Tripterygium wilfordii HOM05D002065 ORTHO05D002050 1.9e-19 100.1 177 33.9
CiPaw.10G067700 Carya illinoinensis HOM05D002065 ORTHO05D002050 8.0e-18 94.7 179 38.0
SalBow8G4741 Salvia bowleyana HOM05D002065 ORTHO05D002050 1.8e-17 93.6 174 35.1
Rhsim13G0158000 Rhododendron simsii HOM05D002065 ORTHO05D002050 3.0e-17 92.8 192 34.4
QL05p075311 Quercus lobata HOM05D002065 ORTHO05D002050 5.7e-16 88.6 193 31.1
ATR0794G057 Amborella trichopoda HOM05D002065 ORTHO05D002050 1.3e-15 87.4 176 31.8
ClCG03G005020 Citrullus lanatus HOM05D002065 ORTHO05D002050 3.7e-15 85.9 152 37.5
TWI38G1319 Tripterygium wilfordii HOM05D002065 ORTHO05D002050 8.3e-15 84.7 176 33.5
MBI18_g40467_MAGBIO Magnolia biondii HOM05D002065 ORTHO05D002050 1.8e-14 83.6 185 31.9
Haze_06727 Corylus avellana HOM05D004864 ORTHO05D005393 7.0e-14 81.6 109 42.2
Haze_06730 Corylus avellana HOM05D004864 ORTHO05D005393 7.0e-14 81.6 109 42.2
Cfa021641 Carpinus fangiana HOM05D002065 ORTHO05D002050 3.5e-13 79.3 177 32.8
Nn1g07008 Nelumbo nucifera HOM05D002065 ORTHO05D002050 4.5e-13 79.0 177 31.6
Duzib235G0905 Durio zibethinus HOM05D002065 ORTHO05D002050 1.0e-12 77.8 187 31.6
CiPaw.09G086400 Carya illinoinensis HOM05D002065 ORTHO05D002050 1.7e-12 77.0 182 32.4
Duzib235G0538 Durio zibethinus HOM05D002065 ORTHO05D002050 1.7e-12 77.0 180 31.1
MBI18_g06812_MAGBIO Magnolia biondii HOM05D004864 ORTHO05D002050 1.7e-12 77.0 168 28.0
TAR629G2752 Trochodendron aralioides HOM05D002065 ORTHO05D002050 1.7e-12 77.0 168 33.3
Gohir.A10G015700 Gossypium hirsutum HOM05D002065 ORTHO05D002050 2.9e-12 76.3 181 32.6
CiPaw.09G085400 Carya illinoinensis HOM05D002065 ORTHO05D002050 5.0e-12 75.5 182 32.4
Gohir.D10G015700 Gossypium hirsutum HOM05D002065 ORTHO05D002050 5.0e-12 75.5 185 33.0
Gorai.011G017400 Gossypium raimondii HOM05D002065 ORTHO05D002050 8.6e-12 74.7 185 33.0
MD10G1314100 Malus domestica HOM05D002065 ORTHO05D002050 3.3e-11 72.8 182 31.3
Ciclev10017718m.g Citrus clementina HOM05D002065 ORTHO05D002050 7.3e-11 71.6 193 31.1
Manes.17G029300 Manihot esculenta HOM05D002065 ORTHO05D002050 7.3e-11 71.6 181 29.8
Hma1.2p1_0729F.1_g209610 Hydrangea macrophylla HOM05D002065 ORTHO05D002050 2.1e-10 70.1 169 30.8
Lsat_1_v5_gn_7_16941 Lactuca sativa HOM05D002065 ORTHO05D002050 3.6e-10 69.3 158 32.3
QL05p075313 Quercus lobata HOM05D002065 ORTHO05D002050 4.7e-10 68.9 180 30.6
Thecc.06G213400 Theobroma cacao HOM05D002065 ORTHO05D002050 8.0e-10 68.2 176 30.1
A01p34210 Brassica napus HOM05D002065 ORTHO05D002050 1.0e-09 67.8 167 31.1
BraA01t03521Z Brassica rapa HOM05D002065 ORTHO05D002050 1.0e-09 67.8 167 31.1
RcHm_v2.0_Chr5g0037701 Rosa chinensis HOM05D002065 ORTHO05D002050 1.0e-09 67.8 174 32.8
Sed0000521 Sechium edule HOM05D004864 ORTHO05D005393 1.4e-09 67.4 131 29.0
MD05G1340600 Malus domestica HOM05D002065 ORTHO05D002050 1.8e-09 67.0 181 31.5
FAN25G0910 Fragaria x ananassa HOM05D000980 ORTHO05D000649 2.3e-09 66.6 149 27.5
PSO675G3505 Papaver somniferum HOM05D002065 ORTHO05D002050 4.0e-09 65.9 187 29.4
Peaxi162Scf00392g00045 Petunia axillaris HOM05D000733 ORTHO05D000649 4.0e-09 65.9 168 26.8
Prupe.6G114100 Prunus persica HOM05D000980 ORTHO05D000649 4.0e-09 65.9 148 29.1
Gohir.A06G144950 Gossypium hirsutum HOM05D002065 ORTHO05D002050 5.2e-09 65.5 171 28.7
Lsat_1_v5_gn_5_5781 Lactuca sativa HOM05D002065 ORTHO05D002050 5.2e-09 65.5 156 31.4
Lsat_1_v5_gn_3_120800 Lactuca sativa HOM05D002065 ORTHO05D002050 6.8e-09 65.1 158 30.4
MD03G1127800 Malus domestica HOM05D000980 ORTHO05D000649 6.8e-09 65.1 140 30.0
Potri.004G023400 Populus trichocarpa HOM05D002065 ORTHO05D002050 6.8e-09 65.1 179 28.5
PGSC0003DMG400024324 Solanum tuberosum HOM05D000980 ORTHO05D000649 8.9e-09 64.7 150 28.0
TAR629G2849 Trochodendron aralioides HOM05D002065 ORTHO05D002050 8.9e-09 64.7 184 27.7
QL08p013247 Quercus lobata HOM05D002065 ORTHO05D002050 1.5e-08 63.9 168 28.0
FAN11G0534 Fragaria x ananassa HOM05D000980 ORTHO05D000649 2.0e-08 63.5 149 26.8
FAN16G0197 Fragaria x ananassa HOM05D000980 ORTHO05D000649 2.0e-08 63.5 149 26.8
FAN21G3359 Fragaria x ananassa HOM05D000980 ORTHO05D000649 2.0e-08 63.5 149 26.8
Gohir.D06G151332 Gossypium hirsutum HOM05D002065 ORTHO05D002050 2.0e-08 63.5 171 28.1
Gorai.010G176400 Gossypium raimondii HOM05D002065 ORTHO05D002050 2.0e-08 63.5 171 28.1
CsaV3_1G011100 Cucumis sativus L. HOM05D060685 ORTHO05D002050 4.4e-08 62.4 158 29.7
FvH4_3g30480 Fragaria vesca HOM05D000980 ORTHO05D000649 4.4e-08 62.4 149 26.8
Cfa021147 Carpinus fangiana HOM05D000980 ORTHO05D000649 5.8e-08 62.0 149 26.8
Nn1g07007 Nelumbo nucifera HOM05D002065 ORTHO05D002050 5.8e-08 62.0 167 27.5
RcHm_v2.0_Chr5g0056431 Rosa chinensis HOM05D000980 ORTHO05D000649 5.8e-08 62.0 149 27.5
CAN.G246.4 Capsicum annuum HOM05D000980 ORTHO05D000649 7.5e-08 61.6 150 26.0
Rhsim13G0158100 Rhododendron simsii HOM05D002065 ORTHO05D002050 9.8e-08 61.2 171 26.3
MD03G1211000 Malus domestica HOM05D002065 ORTHO05D002050 1.3e-07 60.8 182 28.0
TAR626G1743 Trochodendron aralioides HOM05D002065 ORTHO05D002050 1.3e-07 60.8 171 28.1
Cc05_g13270 Coffea canephora HOM05D002065 ORTHO05D002050 1.7e-07 60.5 167 32.3
MD03G1210900 Malus domestica HOM05D002065 ORTHO05D002050 1.7e-07 60.5 182 28.0
MD11G1149600 Malus domestica HOM05D000980 ORTHO05D000649 1.7e-07 60.5 148 29.1
Aqoxy4G02006 Aquilegia oxysepala HOM05D002065 ORTHO05D002050 2.2e-07 60.1 188 29.3
arahy.Tifrunner.gnm1.ann1.2X3X0W Arachis hypogaea HOM05D000980 ORTHO05D000649 2.2e-07 60.1 157 22.3
arahy.Tifrunner.gnm1.ann1.ECG1V9 Arachis hypogaea HOM05D000980 ORTHO05D000649 2.2e-07 60.1 157 22.3
Prupe.4G027000 Prunus persica HOM05D002065 ORTHO05D002050 2.2e-07 60.1 181 27.6
Thhalv10021500m.g Eutrema salsugineum HOM05D002065 ORTHO05D002050 2.9e-07 59.7 173 28.3
FvH4_3g02720 Fragaria vesca HOM05D002065 ORTHO05D002050 2.9e-07 59.7 187 27.3
Prupe.4G026900 Prunus persica HOM05D002065 ORTHO05D002050 2.9e-07 59.7 182 27.5
ATR0772G197 Amborella trichopoda HOM05D002687 ORTHO05D002052 3.7e-07 59.3 165 27.3
EL10Ac4g07955 Beta vulgaris HOM05D002065 ORTHO05D002050 3.7e-07 59.3 147 29.3
AUR62020549 Chenopodium quinoa HOM05D002065 ORTHO05D002050 4.9e-07 58.9 144 27.8
Haze_23524 Corylus avellana HOM05D000980 ORTHO05D000649 4.9e-07 58.9 149 24.8
DCAR_015500 Daucus carota HOM05D000980 ORTHO05D000649 4.9e-07 58.9 149 24.8
HanXRQChr13g0403571 Helianthus annuus HOM05D000733 ORTHO05D000649 4.9e-07 58.9 153 25.5
EL10Ac7g16313 Beta vulgaris HOM05D002687 ORTHO05D002052 6.4e-07 58.5 158 25.9
Prupe.7G111600 Prunus persica HOM05D000980 ORTHO05D000649 6.4e-07 58.5 102 33.3
Prupe.7G112000 Prunus persica HOM05D000980 ORTHO05D000649 6.4e-07 58.5 195 30.8
MD14G1022100 Malus domestica HOM05D000980 ORTHO05D000649 8.3e-07 58.2 103 37.9
GSVIVG01031450001 Vitis vinifera HOM05D000980 ORTHO05D000649 8.3e-07 58.2 138 26.8
AUR62015652 Chenopodium quinoa HOM05D002065 ORTHO05D002050 1.1e-06 57.8 149 26.8
Duzib150G0967 Durio zibethinus HOM05D000980 ORTHO05D000649 1.1e-06 57.8 159 26.4
MELO3C002487.2 Cucumis melo HOM05D060685 ORTHO05D002050 1.4e-06 57.4 110 35.5
Nitab4.5_0005152g0040 Nicotiana tabacum HOM05D000733 ORTHO05D000649 1.4e-06 57.4 150 28.0
Duzib192G0918 Durio zibethinus HOM05D002065 ORTHO05D002050 1.9e-06 57.0 172 28.5
Prupe.7G111500 Prunus persica HOM05D000980 ORTHO05D000649 1.9e-06 57.0 103 35.9
TAR623G0011 Trochodendron aralioides HOM05D002687 ORTHO05D002052 1.9e-06 57.0 170 27.6
TAR633G1866 Trochodendron aralioides HOM05D000733 ORTHO05D000649 1.9e-06 57.0 160 25.0
CANSAT64G0277 Cannabis sativa HOM05D000980 ORTHO05D000649 3.2e-06 56.2 144 29.9
Ciclev10029305m.g Citrus clementina HOM05D000733 ORTHO05D000649 3.2e-06 56.2 161 26.7
Gohir.D10G015750 Gossypium hirsutum HOM05D002065 ORTHO05D002050 3.2e-06 56.2 184 27.7
Sabra04G0012800 Salix brachista HOM05D004864 ORTHO05D005393 3.2e-06 56.2 175 27.4
Solyc11g066490.1 Solanum lycopersicum HOM05D000733 ORTHO05D000649 3.2e-06 56.2 149 24.8
Migut.J00714 Erythranthe guttata HOM05D000980 ORTHO05D000649 4.1e-06 55.8 173 29.5
Rhsim13G0101800 Rhododendron simsii HOM05D000733 ORTHO05D000649 4.1e-06 55.8 162 21.6
Sopen11g026240 Solanum pennellii HOM05D000733 ORTHO05D000649 4.1e-06 55.8 149 24.2
FAN25G0723 Fragaria x ananassa HOM05D002065 ORTHO05D002050 5.4e-06 55.5 187 27.3
Gorai.011G017500 Gossypium raimondii HOM05D002065 ORTHO05D002050 5.4e-06 55.5 184 27.7
MD03G1211100 Malus domestica HOM05D002065 ORTHO05D002050 5.4e-06 55.5 182 26.9
Potri.016G071600 Populus trichocarpa HOM05D000980 ORTHO05D000649 5.4e-06 55.5 180 29.4
CANSAT64G2923 Cannabis sativa HOM05D000733 ORTHO05D000649 7.0e-06 55.1 148 28.4
TAR369G0448 Trochodendron aralioides HOM05D002687 ORTHO05D002052 7.0e-06 55.1 152 28.9
Dinv18891 Davidia involucrata HOM05D002065 ORTHO05D002050 9.2e-06 54.7 170 26.5
ECA238G0184 Erigeron canadensis HOM05D002687 ORTHO05D002052 9.2e-06 54.7 172 27.3
Nn2g13881 Nelumbo nucifera HOM05D000733 ORTHO05D000649 9.2e-06 54.7 159 22.6


User provided reference genes

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