Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g024680 Solanum pennellii HOM05D006759 ORTHO05D008633 1.1e-164 583.2 287 100.0
Solyc02g079930.3 Solanum lycopersicum HOM05D006759 ORTHO05D008633 4.7e-163 577.8 287 99.3
PGSC0003DMG400021726 Solanum tuberosum HOM05D006759 ORTHO05D008633 1.4e-162 576.2 287 99.0
CAN.G424.100 Capsicum annuum HOM05D006759 ORTHO05D008633 2.6e-153 545.4 287 92.3
Nitab4.5_0006475g0040 Nicotiana tabacum HOM05D006759 ORTHO05D008633 2.7e-150 535.4 288 91.0
Nitab4.5_0002345g0080 Nicotiana tabacum HOM05D006759 ORTHO05D008633 8.5e-149 530.4 288 89.6
Peaxi162Scf00082g01114 Petunia axillaris HOM05D006759 ORTHO05D008633 2.3e-141 505.8 282 87.2
Rhsim02G0115500 Rhododendron simsii HOM05D006759 ORTHO05D008633 9.5e-132 473.8 285 77.2
vmacro15843 Vaccinium macrocarpon HOM05D006759 ORTHO05D008633 6.8e-130 467.6 287 75.6
MSTRG.15955 Avicennia marina HOM05D006759 ORTHO05D008633 1.5e-129 466.5 287 76.3
CSS0000245 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 1.3e-128 463.4 287 74.9
CSS0002106 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 4.9e-128 461.5 287 74.6
MD10G1311200 Malus domestica HOM05D006759 ORTHO05D008633 9.2e-127 457.2 287 74.2
PGR004G2806 Punica granatum HOM05D006759 ORTHO05D008633 1.2e-126 456.8 287 74.6
TWI38G2336 Tripterygium wilfordii HOM05D006759 ORTHO05D008633 1.6e-126 456.4 287 72.8
Dinv17853 Davidia involucrata HOM05D006759 ORTHO05D008633 3.5e-126 455.3 272 78.3
Migut.M01261 Erythranthe guttata HOM05D006759 ORTHO05D008633 7.8e-126 454.1 287 73.2
SalBow8G2756 Salvia bowleyana HOM05D006759 ORTHO05D008633 7.8e-126 454.1 284 73.2
SGA_v2.0_scaffold7G03895 Striga asiatica HOM05D006759 ORTHO05D008633 1.0e-125 453.8 287 72.8
QL05p077196 Quercus lobata HOM05D006759 ORTHO05D008633 1.3e-125 453.4 285 71.9
Cfa016405 Carpinus fangiana HOM05D006759 ORTHO05D008633 1.7e-125 453.0 285 71.6
CiPaw.09G080000 Carya illinoinensis HOM05D006759 ORTHO05D008633 1.7e-125 453.0 287 71.4
Eucgr.D00856 Eucalyptus grandis HOM05D006759 ORTHO05D008633 1.7e-125 453.0 287 72.8
Cc02_g11810 Coffea canephora HOM05D006759 ORTHO05D008633 3.0e-125 452.2 291 72.9
QL93p0073_1304 Quercus lobata HOM05D006759 ORTHO05D008633 5.0e-125 451.4 285 71.6
CANSAT56G4156 Cannabis sativa HOM05D006759 ORTHO05D008633 6.6e-125 451.1 287 69.7
Oeu058167.4 Olea europaea HOM05D006759 ORTHO05D008633 1.5e-124 449.9 309 71.2
CsaV3_1G011360 Cucumis sativus L. HOM05D006759 ORTHO05D008633 2.5e-124 449.1 287 71.1
MELO3C002513.2 Cucumis melo HOM05D006759 ORTHO05D008633 4.3e-124 448.4 287 71.4
Lalb_Chr05g0218011 Lupinus albus HOM05D006759 ORTHO05D008633 4.3e-124 448.4 287 69.7
FvH4_3g02960 Fragaria vesca HOM05D006759 ORTHO05D008633 9.5e-124 447.2 287 71.8
Gorai.011G019000 Gossypium raimondii HOM05D006759 ORTHO05D008633 9.5e-124 447.2 284 71.1
RcHm_v2.0_Chr5g0004601 Rosa chinensis HOM05D006759 ORTHO05D008633 9.5e-124 447.2 287 71.4
Duzib160G0398 Durio zibethinus HOM05D006759 ORTHO05D008633 1.2e-123 446.8 284 71.8
Gohir.A10G017000 Gossypium hirsutum HOM05D006759 ORTHO05D008633 2.1e-123 446.0 284 71.1
Haze_06682 Corylus avellana HOM05D006759 ORTHO05D008633 2.8e-123 445.7 287 71.1
FAN21G1217 Fragaria x ananassa HOM05D006759 ORTHO05D008633 4.0e-122 441.8 287 71.1
FAN21G3610 Fragaria x ananassa HOM05D006759 ORTHO05D008633 4.0e-122 441.8 287 71.1
FAN25G0528 Fragaria x ananassa HOM05D006759 ORTHO05D008633 6.8e-122 441.0 287 70.7
Gohir.D10G017100 Gossypium hirsutum HOM05D006759 ORTHO05D008633 1.5e-121 439.9 284 70.1
ClCG03G005150 Citrullus lanatus HOM05D006759 ORTHO05D008633 2.0e-121 439.5 301 67.4
COL.COLO4_31683 Corchorus olitorius HOM05D006759 ORTHO05D008633 2.0e-121 439.5 284 69.7
Thecc.06G208000 Theobroma cacao HOM05D006759 ORTHO05D008633 3.4e-121 438.7 284 70.1
Prupe.4G029700 Prunus persica HOM05D006759 ORTHO05D008633 3.7e-120 435.3 271 73.8
Lj4g0006967 Lotus japonicus HOM05D006759 ORTHO05D008633 8.3e-120 434.1 287 67.2
TAR626G1069 Trochodendron aralioides HOM05D006759 ORTHO05D008633 1.9e-119 433.0 287 72.1
Ca_18449_v3 Cicer arietinum L. HOM05D006759 ORTHO05D008633 3.2e-119 432.2 287 66.9
PSO170G0831 Papaver somniferum HOM05D006759 ORTHO05D008633 7.0e-119 431.0 290 70.0
Potri.011G031600 Populus trichocarpa HOM05D006759 ORTHO05D008633 7.0e-119 431.0 285 69.8
Sc05g0008410 Simmondsia chinensis HOM05D006759 ORTHO05D008633 2.1e-118 429.5 283 68.9
Cpa.g.sc81.5 Carica papaya HOM05D006759 ORTHO05D008633 2.7e-118 429.1 284 70.8
THA.LOC104812582 Tarenaya hassleriana HOM05D006759 ORTHO05D008633 2.7e-118 429.1 287 69.3
Aa31LG6G3340 Aethionema arabicum HOM05D006759 ORTHO05D008633 1.0e-117 427.2 286 68.5
CARHR227890 Cardamine hirsuta HOM05D006759 ORTHO05D008633 1.0e-117 427.2 286 68.5
Lsat_1_v5_gn_7_18360 Lactuca sativa HOM05D006759 ORTHO05D008633 1.0e-117 427.2 286 68.9
Nn1g03732 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.0e-117 427.2 285 70.5
Sabra11G0019100 Salix brachista HOM05D006759 ORTHO05D008633 1.0e-117 427.2 285 69.1
Atru.chr10.2043 Acer truncatum HOM05D006759 ORTHO05D008633 1.3e-117 426.8 284 68.7
Ciclev10016144m.g Citrus clementina HOM05D006759 ORTHO05D008633 1.3e-117 426.8 285 69.8
Medtr4g092110 Medicago truncatula HOM05D006759 ORTHO05D008633 1.3e-117 426.8 287 66.6
Psat7g105480 Pisum sativum HOM05D006759 ORTHO05D008633 2.3e-117 426.0 287 66.9
Carub.0007s2012 Capsella rubella HOM05D006759 ORTHO05D008633 3.0e-117 425.6 286 68.9
Sabra11G0024900 Salix brachista HOM05D006759 ORTHO05D008633 5.1e-117 424.9 285 69.5
AL7G32800 Arabidopsis lyrata HOM05D006759 ORTHO05D008633 1.1e-116 423.7 286 68.2
AT4G21320 Arabidopsis thaliana HOM05D006759 ORTHO05D008633 2.5e-116 422.5 286 68.2
arahy.Tifrunner.gnm1.ann1.13LU1X Arachis hypogaea HOM05D006759 ORTHO05D008633 5.6e-116 421.4 288 67.4
AUR62014623 Chenopodium quinoa HOM05D006759 ORTHO05D008633 5.6e-116 421.4 286 66.8
arahy.Tifrunner.gnm1.ann1.6345FV Arachis hypogaea HOM05D006759 ORTHO05D008633 7.3e-116 421.0 286 67.5
unitig_37.g12139 Utricularia gibba HOM05D006759 ORTHO05D008633 1.2e-115 420.2 287 68.6
Manes.16G016600 Manihot esculenta HOM05D006759 ORTHO05D008633 2.1e-115 419.5 283 67.8
HanXRQChr05g0130811 Helianthus annuus HOM05D006759 ORTHO05D008633 3.6e-115 418.7 286 68.5
BolC7t45615H Brassica oleracea HOM05D006759 ORTHO05D008633 4.7e-115 418.3 285 67.7
ECA236G1815 Erigeron canadensis HOM05D006759 ORTHO05D008633 8.1e-115 417.5 282 69.5
Thhalv10025914m.g Eutrema salsugineum HOM05D006759 ORTHO05D008633 1.1e-114 417.2 284 67.3
A03p52720 Brassica napus HOM05D006759 ORTHO05D008633 1.4e-114 416.8 283 67.1
AUR62012578 Chenopodium quinoa HOM05D006759 ORTHO05D008633 4.0e-114 415.2 286 66.4
Glyma.08G062300 Glycine max HOM05D006759 ORTHO05D008633 1.5e-113 413.3 287 66.2
MBI02_g02472_MAGBIO Magnolia biondii HOM05D006759 ORTHO05D008633 7.5e-113 411.0 327 60.2
Sp7g19390 Schrenkiella parvula HOM05D006759 ORTHO05D008633 9.9e-113 410.6 287 65.9
BcaC06g30660 Brassica carinata HOM05D006759 ORTHO05D008633 4.9e-112 408.3 285 66.3
EL10As6g23697 Beta vulgaris HOM05D006759 ORTHO05D008633 5.4e-111 404.8 286 65.0
DCAR_028150 Daucus carota HOM05D006759 ORTHO05D008633 5.4e-111 404.8 269 67.7
TPR.G13912 Trifolium pratense HOM05D006759 ORTHO05D008633 3.5e-110 402.1 285 63.5
BcaNung00862 Brassica carinata HOM05D006759 ORTHO05D008633 5.1e-109 398.3 269 68.0
C07p51160 Brassica napus HOM05D006759 ORTHO05D008633 5.1e-109 398.3 269 68.0
Ah.14g088500 Amaranthus hybridus HOM05D006759 ORTHO05D008633 8.6e-109 397.5 277 65.0
BraA03t14346Z Brassica rapa HOM05D006759 ORTHO05D008633 1.5e-108 396.7 269 66.9
Sed0013464 Sechium edule HOM05D006759 ORTHO05D008633 1.2e-105 387.1 250 71.2
ATR0073G021 Amborella trichopoda HOM05D006759 ORTHO05D008633 1.5e-105 386.7 268 65.7
CDE05G1382 Ceratophyllum demersum HOM05D006759 ORTHO05D008633 7.6e-105 384.4 285 61.4
Hund21315 Selenicereus undatus HOM05D006759 ORTHO05D008633 1.4e-103 380.2 262 67.9
Os06g0682900 Oryza sativa ssp. japonica HOM05D006759 ORTHO05D008633 3.5e-102 375.6 303 62.7
Phvul.002G218300 Phaseolus vulgaris HOM05D006759 ORTHO05D008633 1.0e-101 374.0 285 61.8
Zm00001eb225360 Zea mays HOM05D006759 ORTHO05D008633 5.6e-100 368.2 279 64.2
VMungo0251G0437 Vigna mungo HOM05D006759 ORTHO05D008633 4.0e-98 362.1 287 59.9
HPP92_027153 Vanilla planifolia HOM05D006759 ORTHO05D008633 4.4e-97 358.6 247 66.0
Lj1C1222T1 Lonicera japonica HOM05D006759 ORTHO05D008633 1.9e-95 353.2 239 69.9
GSVIVG01004352001 Vitis vinifera HOM05D006759 ORTHO05D008633 4.3e-92 342.0 213 74.2
SEGI_30514 Sequoiadendron giganteum HOM05D006759 ORTHO05D008633 2.6e-81 306.2 259 56.0
Actinidia36908 Actinidia chinensis HOM05D006759 ORTHO05D008633 4.5e-73 278.9 175 73.1
AagrBONN_evm.TU.Sc2ySwM_117.529 Anthoceros agrestis HOM05D006759 ORTHO05D008633 6.7e-69 265.0 260 46.2
Mapoly0122s0010 Marchantia polymorpha HOM05D006759 ORTHO05D008633 6.3e-67 258.5 261 47.1
Pp3c22_820 Physcomitrium patens HOM05D006759 ORTHO05D008633 6.5e-64 248.4 253 48.2
Pp3c18_19780 Physcomitrium patens HOM05D006759 ORTHO05D008633 2.7e-62 243.0 258 45.7
GSVIVG01002901001 Vitis vinifera HOM05D006759 ORTHO05D008633 6.1e-46 188.7 111 78.4
Nn2g12529 Nelumbo nucifera HOM05D006759 ORTHO05D008633 4.4e-44 182.6 152 57.2
SMO327G0040 Selaginella moellendorffii HOM05D006759 ORTHO05D008633 4.8e-43 179.1 253 36.8
Potri.004G031100 Populus trichocarpa HOM05D006759 ORTHO05D008633 1.2e-36 157.9 194 43.3
Hund21313 Selenicereus undatus HOM05D006759 ORTHO05D008633 1.5e-36 157.5 304 36.8
CANSAT21G1109 Cannabis sativa HOM05D006759 ORTHO05D008633 1.8e-34 150.6 105 61.0
RcHm_v2.0_Chr5g0004571 Rosa chinensis HOM05D006759 ORTHO05D008633 1.7e-32 144.1 137 54.7
Aqoxy1G03825 Aquilegia oxysepala HOM05D006759 ORTHO05D008633 1.2e-30 137.9 88 73.9
Glyma.07G186901 Glycine max HOM05D006759 ORTHO05D008633 3.0e-29 133.3 95 64.2
GSVIVG01004471001 Vitis vinifera HOM05D006759 ORTHO05D008633 1.5e-28 131.0 75 77.3
Nn7g36203 Nelumbo nucifera HOM05D006759 ORTHO05D008633 2.6e-28 130.2 95 63.2
COL.COLO4_11824 Corchorus olitorius HOM05D000068 ORTHO05D000084 1.8e-18 97.4 67 68.7
COL.COLO4_37489 Corchorus olitorius HOM05D006759 ORTHO05D161314 5.4e-18 95.9 66 68.2
Hund21314 Selenicereus undatus HOM05D006759 ORTHO05D381616 2.2e-11 73.9 41 78.0


User provided reference genes

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