Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g024640 Solanum pennellii HOM05D005409 ORTHO05D006456 0.0e+00 1230.7 637 100.0
Solyc02g079880.3 Solanum lycopersicum HOM05D005409 ORTHO05D006456 0.0e+00 1193.3 640 96.4
PGSC0003DMG400021722 Solanum tuberosum HOM05D005409 ORTHO05D006456 0.0e+00 1175.6 640 95.3
Nitab4.5_0006456g0010 Nicotiana tabacum HOM05D005409 ORTHO05D006456 1.6e-296 1022.3 645 82.6
Nitab4.5_0000503g0080 Nicotiana tabacum HOM05D005409 ORTHO05D006456 1.8e-295 1018.8 647 82.8
Peaxi162Scf00759g00211 Petunia axillaris HOM05D005409 ORTHO05D006456 1.4e-284 982.6 645 80.0
Dinv18952 Davidia involucrata HOM05D005409 ORTHO05D006456 1.1e-185 654.1 665 57.6
Cc02_g11840 Coffea canephora HOM05D005409 ORTHO05D006456 4.6e-179 632.1 650 56.2
Oeu016146.1 Olea europaea HOM05D005409 ORTHO05D006456 2.1e-163 580.1 650 53.7
Actinidia11830 Actinidia chinensis HOM05D005409 ORTHO05D006456 7.2e-156 555.1 657 51.6
Lj2A276T57 Lonicera japonica HOM05D005409 ORTHO05D006456 7.2e-156 555.1 655 53.0
Cfa016400 Carpinus fangiana HOM05D005409 ORTHO05D006456 9.4e-156 554.7 655 52.1
MSTRG.15953 Avicennia marina HOM05D005409 ORTHO05D006456 3.7e-152 542.7 650 51.8
TAR624G1144 Trochodendron aralioides HOM05D005409 ORTHO05D006456 4.1e-151 539.3 666 49.7
Hma1.2p1_0809F.1_g221770 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 5.3e-151 538.9 658 51.5
Prupe.4G030000 Prunus persica HOM05D005409 ORTHO05D006456 1.7e-149 533.9 648 50.3
Manes.17G030300 Manihot esculenta HOM05D005409 ORTHO05D006456 3.2e-148 529.6 653 51.1
Duzib192G0995 Durio zibethinus HOM05D005409 ORTHO05D006456 2.6e-145 520.0 652 50.0
MD05G1335400 Malus domestica HOM05D005409 ORTHO05D006456 7.4e-145 518.5 651 49.9
Oeu050809.4 Olea europaea HOM05D005409 ORTHO05D006456 9.7e-145 518.1 666 48.8
Thecc.06G207400 Theobroma cacao HOM05D005409 ORTHO05D006456 5.3e-143 512.3 654 50.3
Gorai.006G084700 Gossypium raimondii HOM05D005409 ORTHO05D006456 7.0e-143 511.9 661 49.2
CiPaw.10G113200 Carya illinoinensis HOM05D005409 ORTHO05D006456 1.6e-142 510.8 662 50.0
Gohir.D09G070300 Gossypium hirsutum HOM05D005409 ORTHO05D006456 1.6e-142 510.8 654 49.5
Duzib235G0390 Durio zibethinus HOM05D005409 ORTHO05D006456 5.9e-142 508.8 666 49.8
Ciclev10014614m.g Citrus clementina HOM05D005409 ORTHO05D006456 1.7e-141 507.3 656 48.6
Gohir.D10G017400 Gossypium hirsutum HOM05D005409 ORTHO05D006456 1.0e-138 498.0 650 49.1
Gorai.011G019300 Gossypium raimondii HOM05D005409 ORTHO05D006456 1.0e-138 498.0 650 49.1
Gohir.A09G070200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 1.8e-138 497.3 653 49.3
FAN25G1204 Fragaria x ananassa HOM05D005409 ORTHO05D006456 5.2e-138 495.7 688 46.8
Lj1A1221T57 Lonicera japonica HOM05D005409 ORTHO05D006456 3.4e-137 493.0 650 49.5
Rhsim02G0115600 Rhododendron simsii HOM05D005409 ORTHO05D006456 1.3e-136 491.1 700 46.4
ECA236G3644 Erigeron canadensis HOM05D005409 ORTHO05D006456 6.3e-136 488.8 658 50.6
Nn1g06923 Nelumbo nucifera HOM05D005409 ORTHO05D006456 1.4e-135 487.6 662 50.3
QL05p077347 Quercus lobata HOM05D005409 ORTHO05D006456 1.4e-135 487.6 703 48.1
Gohir.A10G017200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 1.8e-135 487.3 649 47.9
CANSAT35G0463 Cannabis sativa HOM05D005409 ORTHO05D006456 2.7e-134 483.4 647 49.9
COL.COLO4_33645 Corchorus olitorius HOM05D005409 ORTHO05D006456 2.7e-134 483.4 653 49.8
TAR626G0140 Trochodendron aralioides HOM05D005409 ORTHO05D006456 2.7e-134 483.4 664 47.7
MD10G1310800 Malus domestica HOM05D005409 ORTHO05D006456 5.9e-134 482.3 656 47.3
CiPaw.10G113100 Carya illinoinensis HOM05D005409 ORTHO05D006456 8.5e-133 478.4 657 48.6
Lj4g0002185 Lotus japonicus HOM05D005409 ORTHO05D006456 1.1e-132 478.0 657 49.2
Phvul.002G218900 Phaseolus vulgaris HOM05D005409 ORTHO05D006456 1.5e-132 477.6 665 47.2
Sc17g0006920 Simmondsia chinensis HOM05D005409 ORTHO05D006456 1.5e-132 477.6 646 46.0
Glyma.07G187300 Glycine max HOM05D005409 ORTHO05D006456 7.2e-132 475.3 656 47.6
Glyma.08G061800 Glycine max HOM05D005409 ORTHO05D006456 7.2e-132 475.3 659 47.3
VMungo0251G1750 Vigna mungo HOM05D005409 ORTHO05D006456 1.2e-129 468.0 667 47.2
CsaV3_1G011380 Cucumis sativus L. HOM05D005409 ORTHO05D006456 2.0e-129 467.2 652 47.2
Migut.M01258 Erythranthe guttata HOM05D005409 ORTHO05D006456 5.7e-129 465.7 652 49.2
HanXRQChr15g0482781 Helianthus annuus HOM05D005409 ORTHO05D006456 2.2e-128 463.8 662 49.1
DCAR_008109 Daucus carota HOM05D005409 ORTHO05D006456 2.4e-127 460.3 647 47.0
ClCG03G005190 Citrullus lanatus HOM05D005409 ORTHO05D006456 4.1e-127 459.5 651 47.3
TWI63G1109 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 1.2e-126 458.0 671 45.9
Ca_18454_v3 Cicer arietinum L. HOM05D005409 ORTHO05D006456 1.6e-126 457.6 662 48.2
HanXRQChr15g0482771 Helianthus annuus HOM05D005409 ORTHO05D006456 7.7e-126 455.3 659 48.0
vmacro15844 Vaccinium macrocarpon HOM05D005409 ORTHO05D006456 1.5e-124 451.1 677 44.9
Lalb_Chr09g0327161 Lupinus albus HOM05D005409 ORTHO05D006456 1.8e-122 444.1 655 47.2
GSVIVG01006401001 Vitis vinifera HOM05D005409 ORTHO05D006456 8.9e-122 441.8 674 44.5
MELO3C002515.2 Cucumis melo HOM05D005409 ORTHO05D006456 2.6e-121 440.3 653 46.6
Hund23539 Selenicereus undatus HOM05D005409 ORTHO05D006456 2.6e-121 440.3 666 43.7
Hma1.2p1_0809F.1_g221760 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 1.3e-120 438.0 537 50.7
Potri.011G031900 Populus trichocarpa HOM05D005409 ORTHO05D006456 8.3e-120 435.3 652 46.5
Psat0s935g0040 Pisum sativum HOM05D005409 ORTHO05D006456 7.0e-119 432.2 653 46.1
Medtr4g092050 Medicago truncatula HOM05D005409 ORTHO05D006456 2.0e-118 430.6 669 45.7
Lsat_1_v5_gn_7_18380 Lactuca sativa HOM05D005409 ORTHO05D006456 1.7e-117 427.6 653 47.3
TPR.G13934 Trifolium pratense HOM05D005409 ORTHO05D006456 1.7e-117 427.6 675 45.2
Sed0006411 Sechium edule HOM05D005409 ORTHO05D006456 5.0e-117 426.0 654 45.9
AUR62012574 Chenopodium quinoa HOM05D005409 ORTHO05D006456 2.5e-116 423.7 668 44.6
EL10As6g23684 Beta vulgaris HOM05D005409 ORTHO05D006456 4.0e-114 416.4 675 43.7
Lalb_Chr16g0383301 Lupinus albus HOM05D005409 ORTHO05D006456 6.8e-114 415.6 652 44.8
Eucgr.E03596 Eucalyptus grandis HOM05D005409 ORTHO05D006456 4.1e-111 406.4 550 48.0
AUR62014626 Chenopodium quinoa HOM05D005409 ORTHO05D006456 7.0e-111 405.6 668 43.0
CSS0017238 Camellia sinensis var. sinensis HOM05D005409 ORTHO05D006456 3.5e-110 403.3 652 44.2
SGA_v2.0_scaffold7G03896 Striga asiatica HOM05D005409 ORTHO05D006456 1.3e-109 401.4 699 42.8
Sabra11G0025100 Salix brachista HOM05D005409 ORTHO05D006456 5.6e-108 396.0 651 43.3
Aqoxy1G03830 Aquilegia oxysepala HOM05D005409 ORTHO05D006456 9.5e-108 395.2 678 42.9
Ah.14g088510 Amaranthus hybridus HOM05D005409 ORTHO05D006456 8.1e-107 392.1 677 42.8
DCAR_004174 Daucus carota HOM05D005409 ORTHO05D006456 3.1e-106 390.2 647 43.9
SalBow8G4343 Salvia bowleyana HOM05D005409 ORTHO05D006456 1.2e-105 388.3 455 51.0
Haze_06671 Corylus avellana HOM05D005409 ORTHO05D006456 5.8e-105 386.0 451 51.2
PSO675G2591 Papaver somniferum HOM05D005409 ORTHO05D006456 5.8e-105 386.0 676 43.8
PSO541G2946 Papaver somniferum HOM05D005409 ORTHO05D006456 1.3e-104 384.8 676 43.9
Actinidia26760 Actinidia chinensis HOM05D005409 ORTHO05D006456 2.9e-104 383.6 545 46.4
PGR042G2399 Punica granatum HOM05D005409 ORTHO05D006456 2.9e-104 383.6 659 44.0
Actinidia24044 Actinidia chinensis HOM05D005409 ORTHO05D006456 2.3e-101 374.0 506 49.0
Oeu050499.1 Olea europaea HOM05D005409 ORTHO05D006456 9.5e-100 368.6 441 49.4
MBI02_g26225_MAGBIO Magnolia biondii HOM05D005409 ORTHO05D006456 6.8e-98 362.5 674 41.7
Sabra11G0019200 Salix brachista HOM05D005409 ORTHO05D006456 8.4e-96 355.5 653 40.6
FvH4_3g03030 Fragaria vesca HOM05D005409 ORTHO05D006456 1.9e-95 354.4 508 45.3
TWI38G0167 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 1.6e-94 351.3 615 42.3
AT1G11480 Arabidopsis thaliana HOM05D005409 ORTHO05D006456 8.1e-91 339.0 652 41.0
Cpa.g.sc81.2 Carica papaya HOM05D005409 ORTHO05D006456 8.1e-91 339.0 449 48.1
GSVIVG01030650001 Vitis vinifera HOM05D005409 ORTHO05D006456 1.8e-90 337.8 657 40.6
Sp1g10100 Schrenkiella parvula HOM05D005409 ORTHO05D006456 2.2e-88 330.9 661 39.8
CARHR011750 Cardamine hirsuta HOM05D005409 ORTHO05D006456 1.4e-87 328.2 649 39.3
Actinidia26959 Actinidia chinensis HOM05D005409 ORTHO05D006456 2.4e-87 327.4 471 46.3
Thhalv10007161m.g Eutrema salsugineum HOM05D005409 ORTHO05D006456 1.2e-86 325.1 654 40.7
AL1G22590 Arabidopsis lyrata HOM05D005409 ORTHO05D006456 2.7e-86 323.9 649 40.1
CDE01G0308 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 1.1e-84 318.5 662 38.4
arahy.Tifrunner.gnm1.ann1.XK38U2 Arachis hypogaea HOM05D005409 ORTHO05D006456 1.5e-84 318.2 664 39.9
C05p09680 Brassica napus HOM05D005409 ORTHO05D006456 1.9e-84 317.8 652 39.1
BraA06t24009Z Brassica rapa HOM05D005409 ORTHO05D006456 4.3e-84 316.6 648 39.0
A06p08100 Brassica napus HOM05D005409 ORTHO05D006456 9.6e-84 315.5 651 38.9
BcaC05g25024 Brassica carinata HOM05D005409 ORTHO05D006456 2.1e-83 314.3 652 38.5
Potri.007G119200 Populus trichocarpa HOM05D005409 ORTHO05D006456 2.1e-83 314.3 669 38.3
THA.LOC104809524 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 1.4e-82 311.6 658 40.4
BolC5t29709H Brassica oleracea HOM05D005409 ORTHO05D006456 2.4e-82 310.8 636 39.0
Aa31LG1G3270 Aethionema arabicum HOM05D005409 ORTHO05D006456 7.6e-81 305.8 665 37.1
Carub.0001s1109 Capsella rubella HOM05D005409 ORTHO05D006456 7.6e-81 305.8 644 39.4
THA.LOC104818924 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 1.3e-80 305.1 617 41.2
CDE12G0800 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 3.8e-80 303.5 532 43.2
Sabra17G0028000 Salix brachista HOM05D005409 ORTHO05D006456 2.7e-78 297.4 726 36.6
arahy.Tifrunner.gnm1.ann1.QZ9QK3 Arachis hypogaea HOM05D005409 ORTHO05D006456 1.3e-77 295.0 703 37.4
RcHm_v2.0_Chr5g0004681 Rosa chinensis HOM05D005409 ORTHO05D006456 6.6e-77 292.7 491 43.0
Potri.017G041300 Populus trichocarpa HOM05D005409 ORTHO05D006456 1.1e-74 285.4 662 39.3
HPP92_000870 Vanilla planifolia HOM05D005409 ORTHO05D006456 1.9e-71 274.6 683 37.8
BcaNung07116 Brassica carinata HOM05D005409 ORTHO05D006456 2.8e-67 260.8 446 41.3
Sabra07G0096100 Salix brachista HOM05D005409 ORTHO05D006456 4.8e-67 260.0 788 33.1
Atru.chr6.3116 Acer truncatum HOM05D005409 ORTHO05D006456 6.0e-62 243.0 471 39.7
Atru.chr10.2048 Acer truncatum HOM05D005409 ORTHO05D006456 5.7e-60 236.5 368 43.5
Os07g0546100 Oryza sativa ssp. japonica HOM05D005409 ORTHO05D006456 9.7e-52 209.1 674 33.2
ATR0804G077 Amborella trichopoda HOM05D005409 ORTHO05D006456 1.8e-50 204.9 734 35.8
GSVIVG01006635001 Vitis vinifera HOM05D005409 ORTHO05D006456 1.2e-49 202.2 163 63.8
Ah.09g237100 Amaranthus hybridus HOM05D000067 ORTHO05D006456 1.0e-45 189.1 636 30.5
Zm00001eb323520 Zea mays HOM05D005409 ORTHO05D006456 6.7e-45 186.4 667 33.4
RcHm_v2.0_Chr5g0004671 Rosa chinensis HOM05D005409 ORTHO05D006456 4.3e-44 183.7 143 63.6
Cpa.g.sc81.1 Carica papaya HOM05D005409 ORTHO05D006456 3.6e-38 164.1 201 51.7
Atru.chr10.2047 Acer truncatum HOM05D005409 ORTHO05D006456 1.3e-35 155.6 259 44.0
CAN.G466.8 Capsicum annuum HOM05D005409 ORTHO05D006456 1.1e-26 125.9 174 46.6
Zm00001eb106500 Zea mays HOM05D005409 ORTHO05D006456 4.5e-25 120.6 444 32.2
SMO118G0050 Selaginella moellendorffii HOM05D005409 ORTHO05D006456 4.1e-18 97.4 776 26.3
Pp3c20_3440 Physcomitrium patens HOM05D005409 ORTHO05D006456 1.3e-16 92.4 287 33.4
AagrBONN_evm.TU.Sc2ySwM_228.455 Anthoceros agrestis HOM05D005409 ORTHO05D006456 1.7e-16 92.0 133 45.9
Mapoly0113s0049 Marchantia polymorpha HOM05D005409 ORTHO05D006456 2.1e-14 85.1 326 29.4
Actinidia26960 Actinidia chinensis HOM05D005409 ORTHO05D006456 8.8e-13 79.7 92 55.4
Atru.chr6.3115 Acer truncatum HOM05D005409 ORTHO05D006456 4.4e-12 77.4 197 33.0
CBR_g36658 Chara braunii HOM05D005409 ORTHO05D006456 2.2e-11 75.1 107 42.1
Haze_06667 Corylus avellana HOM05D005409 ORTHO05D006456 2.2e-11 75.1 189 34.4
QL05p012359 Quercus lobata HOM05D005409 ORTHO05D006456 1.8e-10 72.0 102 45.1


User provided reference genes

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