Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 1.6e-138 496.1 258 100.0
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 5.9e-125 451.1 258 89.9
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 3.0e-100 369.0 262 78.2
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 3.2e-62 242.7 271 58.7
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 2.5e-59 233.0 277 55.6
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 5.1e-44 182.2 265 52.1
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 4.8e-42 175.6 254 44.5
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 2.4e-41 173.3 264 44.7
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 1.2e-37 161.0 253 45.5
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 7.9e-37 158.3 256 42.2
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 2.3e-36 156.8 258 38.4
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 7.4e-35 151.8 229 46.3
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 9.7e-35 151.4 261 41.0
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 2.2e-34 150.2 266 42.1
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 2.8e-34 149.8 272 41.5
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 1.1e-33 147.9 261 41.4
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 4.1e-33 146.0 258 39.1
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 6.9e-33 145.2 254 40.9
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 9.1e-33 144.8 263 39.5
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 9.1e-33 144.8 260 41.5
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 1.2e-32 144.4 264 38.6
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 1.5e-32 144.1 150 50.0
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 5.9e-32 142.1 267 37.1
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 7.7e-32 141.7 263 39.2
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 1.0e-31 141.4 262 42.7
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 1.0e-31 141.4 264 40.2
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 1.3e-31 141.0 258 39.9
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 2.2e-31 140.2 263 39.2
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 6.5e-31 138.7 259 40.5
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 1.4e-30 137.5 143 54.5
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 1.9e-30 137.1 268 39.6
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 3.2e-30 136.3 255 43.1
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 5.5e-30 135.6 270 38.1
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 7.2e-30 135.2 272 39.3
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 7.2e-30 135.2 271 38.0
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 1.6e-29 134.0 259 40.2
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 2.1e-29 133.7 260 37.7
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 3.6e-29 132.9 260 37.7
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 6.1e-29 132.1 184 45.7
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 1.8e-28 130.6 266 41.0
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 3.9e-28 129.4 272 37.9
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 5.1e-28 129.0 256 39.8
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 6.7e-28 128.6 266 38.7
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 6.7e-28 128.6 269 38.7
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 1.5e-27 127.5 259 37.5
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 2.6e-27 126.7 261 36.8
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 3.3e-27 126.3 258 40.3
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 5.7e-27 125.6 136 50.7
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 9.7e-27 124.8 291 35.4
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 1.3e-26 124.4 269 38.3
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 2.2e-26 123.6 265 38.1
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 2.8e-26 123.2 260 38.5
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 3.7e-26 122.9 266 38.0
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 4.8e-26 122.5 266 38.7
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 6.3e-26 122.1 295 35.9
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 6.3e-26 122.1 263 36.5
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 6.3e-26 122.1 263 36.5
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 8.2e-26 121.7 258 39.5
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 8.2e-26 121.7 172 47.1
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 8.2e-26 121.7 265 38.1
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 1.8e-25 120.6 251 39.4
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 3.1e-25 119.8 256 37.9
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 3.1e-25 119.8 258 35.3
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 4.1e-25 119.4 270 36.3
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 5.3e-25 119.0 279 39.8
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 1.2e-24 117.9 260 38.8
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 2.6e-24 116.7 316 33.5
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 5.9e-24 115.5 273 35.9
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 7.7e-24 115.2 266 34.2
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 1.0e-23 114.8 261 36.4
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 1.3e-23 114.4 264 35.6
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 1.3e-23 114.4 242 37.2
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 1.3e-23 114.4 272 35.3
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 3.8e-23 112.8 283 35.0
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 5.0e-23 112.5 263 37.3
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 3.2e-22 109.8 265 36.2
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 5.5e-22 109.0 267 37.5
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 6.1e-21 105.5 243 38.3
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 1.4e-20 104.4 267 33.7
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.3e-20 103.6 261 35.2
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 3.0e-20 103.2 261 35.2
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 5.2e-20 102.4 261 34.9
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 2.6e-19 100.1 279 35.5
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 5.7e-19 99.0 161 45.3
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 2.2e-18 97.1 304 35.2
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 2.8e-18 96.7 124 49.2
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 3.7e-18 96.3 272 33.1
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 8.2e-18 95.1 128 53.1
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 1.4e-17 94.4 129 45.0
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 4.1e-17 92.8 251 33.1
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 4.1e-17 92.8 348 29.0
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 4.5e-16 89.4 277 33.6
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 4.5e-16 89.4 162 37.7
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 4.5e-16 89.4 224 33.0
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 5.9e-16 89.0 273 33.3
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 7.7e-16 88.6 268 32.5
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 7.7e-16 88.6 118 47.5
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 1.7e-15 87.4 249 32.9
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 2.9e-15 86.7 118 47.5
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 6.5e-15 85.5 161 37.9
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 1.9e-14 84.0 287 32.4
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 2.5e-14 83.6 274 32.1
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 3.2e-14 83.2 273 31.1
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 4.2e-14 82.8 272 32.0
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 5.5e-14 82.4 276 33.7
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 1.2e-13 81.3 275 36.0
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 2.7e-13 80.1 272 29.8
Oeu051330.1 Olea europaea HOM05D006486 ORTHO05D007888 3.6e-13 79.7 80 53.8
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 6.1e-13 79.0 272 29.8
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 2.3e-12 77.0 266 31.2
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.3e-12 77.0 115 47.0
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 2.3e-12 77.0 115 47.0
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 4.0e-12 76.3 266 30.1
Nitab4.5_0001007g0050 Nicotiana tabacum HOM05D006486 ORTHO05D007888 4.0e-12 76.3 220 34.1
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 2.6e-11 73.6 270 31.1
Oeu001396.1 Olea europaea HOM05D045950 ORTHO05D007888 8.3e-10 68.6 66 56.1
Oeu001394.1 Olea europaea HOM05D045950 ORTHO05D007888 1.8e-09 67.4 66 56.1
Sc24g0000710 Simmondsia chinensis HOM05D006486 ORTHO05D007888 3.5e-08 63.2 159 37.7
unitig_37.g12336 Utricularia gibba HOM05D006486 ORTHO05D007888 6.5e-07 58.9 247 27.5


User provided reference genes

Program Settings