Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g023940 Solanum pennellii HOM05D007621 ORTHO05D009631 0.0e+00 1275.4 888 100.0
Solyc02g079140.2 Solanum lycopersicum HOM05D007621 ORTHO05D009631 0.0e+00 1207.6 937 91.5
PGSC0003DMG400022357 Solanum tuberosum HOM05D007621 ORTHO05D009631 2.5e-308 1062.0 616 85.9
CAN.G424.15 Capsicum annuum HOM05D007621 ORTHO05D009631 2.8e-275 952.2 584 80.8
Nitab4.5_0006573g0020 Nicotiana tabacum HOM05D007621 ORTHO05D009631 3.8e-256 888.6 540 81.7
Nitab4.5_0000190g0070 Nicotiana tabacum HOM05D007621 ORTHO05D009631 3.6e-254 882.1 533 82.2
Peaxi162Scf00083g00022 Petunia axillaris HOM05D007621 ORTHO05D009631 1.1e-242 844.0 527 79.7
CSS0049226 Camellia sinensis var. sinensis HOM05D007621 ORTHO05D009631 1.8e-189 667.2 572 61.4
GSVIVG01003190001 Vitis vinifera HOM05D007621 ORTHO05D009631 2.0e-188 663.7 536 63.8
Dinv40478 Davidia involucrata HOM05D007621 ORTHO05D009631 3.8e-187 659.4 590 60.0
Actinidia11809 Actinidia chinensis HOM05D007621 ORTHO05D009631 9.3e-186 654.8 526 64.3
Cc02_g12430 Coffea canephora HOM05D007621 ORTHO05D009631 2.7e-185 653.3 441 71.7
Rhsim02G0119600 Rhododendron simsii HOM05D007621 ORTHO05D009631 5.6e-183 645.6 507 65.3
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 2.8e-182 643.3 584 57.9
MSTRG.14678 Avicennia marina HOM05D007621 ORTHO05D009631 4.0e-181 639.4 559 60.5
TAR624G0533 Trochodendron aralioides HOM05D007621 ORTHO05D009631 4.0e-181 639.4 511 63.8
Hma1.2p1_1182F.1_g264810 Hydrangea macrophylla HOM05D007621 ORTHO05D009631 2.4e-178 630.2 590 59.0
SGA_v2.0_scaffold49G18280 Striga asiatica HOM05D007621 ORTHO05D009631 2.4e-178 630.2 520 62.1
Nn1g03894 Nelumbo nucifera HOM05D007621 ORTHO05D009631 7.9e-177 625.2 552 58.3
ATR0693G363 Amborella trichopoda HOM05D007621 ORTHO05D009631 3.3e-175 619.8 434 67.7
Manes.16G020600 Manihot esculenta HOM05D007621 ORTHO05D009631 7.4e-175 618.6 474 63.3
SalBow7G3398 Salvia bowleyana HOM05D007621 ORTHO05D009631 2.8e-174 616.7 542 60.9
TWI38G0795 Tripterygium wilfordii HOM05D007621 ORTHO05D009631 2.8e-174 616.7 583 56.1
QL04p018250 Quercus lobata HOM05D007621 ORTHO05D009631 1.1e-173 614.8 460 66.3
Haze_06574 Corylus avellana HOM05D007621 ORTHO05D009631 1.4e-173 614.4 534 61.4
SalBow7G0238 Salvia bowleyana HOM05D007621 ORTHO05D009631 1.4e-173 614.4 542 60.9
ECA248G3190 Erigeron canadensis HOM05D007621 ORTHO05D009631 9.3e-170 601.7 523 58.1
Sed0011037 Sechium edule HOM05D007621 ORTHO05D009631 4.6e-169 599.4 495 60.8
ClCG03G005520 Citrullus lanatus HOM05D007621 ORTHO05D009631 3.9e-168 596.3 556 56.8
HPP92_005890 Vanilla planifolia HOM05D007621 ORTHO05D009631 2.5e-167 593.6 552 56.7
CDE12G0841 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 4.3e-167 592.8 545 57.8
Ciclev10014484m.g Citrus clementina HOM05D007621 ORTHO05D009631 1.3e-166 591.3 516 59.7
Lsat_1_v5_gn_1_126820 Lactuca sativa HOM05D007621 ORTHO05D009631 2.2e-166 590.5 553 55.3
Sc14g0001480 Simmondsia chinensis HOM05D007621 ORTHO05D009631 3.7e-166 589.7 548 57.7
Lj1C1213T4 Lonicera japonica HOM05D007621 ORTHO05D009631 1.4e-165 587.8 554 56.3
FvH4_3g03980 Fragaria vesca HOM05D007621 ORTHO05D009631 2.4e-165 587.0 531 57.3
RcHm_v2.0_Chr5g0006311 Rosa chinensis HOM05D007621 ORTHO05D009631 1.2e-164 584.7 493 59.4
EL10Ac8g20530 Beta vulgaris HOM05D007621 ORTHO05D009631 4.5e-164 582.8 437 66.4
AUR62014718 Chenopodium quinoa HOM05D007621 ORTHO05D009631 4.5e-164 582.8 468 62.0
CsaV3_1G011790 Cucumis sativus L. HOM05D007621 ORTHO05D009631 4.5e-164 582.8 465 63.0
Glyma.15G067500 Glycine max HOM05D007621 ORTHO05D009631 4.5e-164 582.8 527 57.3
VMungo0540G1980 Vigna mungo HOM05D007621 ORTHO05D009631 1.3e-163 581.3 449 62.8
Lj6g0025549 Lotus japonicus HOM05D007621 ORTHO05D009631 6.5e-163 578.9 607 51.4
FAN11G2677 Fragaria x ananassa HOM05D007621 ORTHO05D009631 8.5e-163 578.6 562 54.4
Eucgr.E03798 Eucalyptus grandis HOM05D007621 ORTHO05D009631 2.5e-162 577.0 520 57.5
SEGI_29793 Sequoiadendron giganteum HOM05D007621 ORTHO05D009631 9.3e-162 575.1 498 58.0
MELO3C002556.2 Cucumis melo HOM05D007621 ORTHO05D009631 1.6e-161 574.3 514 57.6
AUR62016897 Chenopodium quinoa HOM05D007621 ORTHO05D009631 4.6e-161 572.8 452 63.9
CDE01G0329 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 1.8e-160 570.9 529 58.2
Cfa000351 Carpinus fangiana HOM05D007621 ORTHO05D009631 3.0e-160 570.1 589 54.5
arahy.Tifrunner.gnm1.ann1.M1GH8V Arachis hypogaea HOM05D007621 ORTHO05D009631 2.5e-159 567.0 502 58.2
PGR042G2283 Punica granatum HOM05D007621 ORTHO05D009631 3.3e-159 566.6 483 58.8
Os04g0636000 Oryza sativa ssp. japonica HOM05D007621 ORTHO05D009631 4.8e-158 562.8 527 57.3
Zm00001eb069260 Zea mays HOM05D007621 ORTHO05D009631 1.8e-157 560.8 536 56.2
HanXRQChr11g0338441 Helianthus annuus HOM05D007621 ORTHO05D009631 4.1e-157 559.7 417 64.5
Prupe.4G036900 Prunus persica HOM05D007621 ORTHO05D009631 2.0e-156 557.4 498 58.0
MD05G1325500 Malus domestica HOM05D007621 ORTHO05D009631 8.5e-155 552.0 450 61.8
Ca_00253_v3 Cicer arietinum L. HOM05D007621 ORTHO05D009631 1.1e-154 551.6 487 57.7
Psat1g208720 Pisum sativum HOM05D007621 ORTHO05D009631 4.2e-154 549.7 472 58.1
arahy.Tifrunner.gnm1.ann1.14L1JV Arachis hypogaea HOM05D007621 ORTHO05D009631 3.0e-152 543.5 500 55.8
CDE01G0148 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 8.2e-150 535.4 449 60.4
Mapoly0104s0019 Marchantia polymorpha HOM05D007621 ORTHO05D009631 8.2e-150 535.4 422 62.1
FAN16G2797 Fragaria x ananassa HOM05D007621 ORTHO05D009631 5.3e-149 532.7 491 55.8
TPR.G36840 Trifolium pratense HOM05D007621 ORTHO05D009631 2.7e-145 520.4 510 53.3
Hund23606 Selenicereus undatus HOM05D007621 ORTHO05D009631 3.9e-144 516.5 377 68.7
Phvul.006G192200 Phaseolus vulgaris HOM05D007621 ORTHO05D009631 1.0e-139 501.9 597 48.2
PGR042G3240 Punica granatum HOM05D007621 ORTHO05D009631 5.0e-139 499.6 445 56.4
Zm00001eb081180 Zea mays HOM05D007621 ORTHO05D009631 5.7e-127 459.5 385 60.5
Thecc.06G199600 Theobroma cacao HOM05D007621 ORTHO05D009631 3.5e-116 423.7 502 46.8
CBR_g725 Chara braunii HOM05D007621 ORTHO05D009631 4.5e-116 423.3 424 49.8
Aqoxy1G02733 Aquilegia oxysepala HOM05D007621 ORTHO05D009631 9.2e-109 399.1 289 66.4
Eucgr.E03700 Eucalyptus grandis HOM05D007621 ORTHO05D009631 3.6e-97 360.5 362 53.3
Zm00001eb274720 Zea mays HOM05D007621 ORTHO05D009631 6.6e-91 339.7 273 63.7
Oeu050825.1 Olea europaea HOM05D007621 ORTHO05D009631 3.0e-83 314.3 301 59.1
CiPaw.09G157900 Carya illinoinensis HOM05D007621 ORTHO05D009631 2.7e-76 291.2 265 60.0
RcHm_v2.0_Chr7g0240451 Rosa chinensis HOM05D007621 ORTHO05D009631 1.1e-74 285.8 390 42.8
Medtr2g011780 Medicago truncatula HOM05D007621 ORTHO05D009631 1.8e-72 278.5 285 52.3
FAN25G1179 Fragaria x ananassa HOM05D007621 ORTHO05D009631 8.4e-70 269.6 242 60.7
arahy.Tifrunner.gnm1.ann1.C857YU Arachis hypogaea HOM05D007621 ORTHO05D009631 2.0e-63 248.4 283 48.4
Psat1g210360 Pisum sativum HOM05D007621 ORTHO05D009631 1.3e-54 219.2 191 56.5
FvH4_6g02023 Fragaria vesca HOM05D007621 ORTHO05D009631 3.8e-38 164.5 135 54.8
Glyma.13G246302 Glycine max HOM05D007621 ORTHO05D009631 5.3e-32 144.1 143 54.5
Cre02.g116800 Chlamydomonas reinhardtii HOM05D007621 ORTHO05D009631 7.0e-32 143.7 548 26.3
Atru.chr10.2012 Acer truncatum HOM05D007621 ORTHO05D009631 3.6e-28 131.3 135 51.9
Potri.004G034301 Populus trichocarpa HOM05D007621 ORTHO05D009631 1.1e-24 119.8 78 65.4
Cpa.g.sc27.127 Carica papaya HOM05D007621 ORTHO05D009631 2.5e-21 108.6 122 50.8
SGA_v2.0_scaffold32G13107 Striga asiatica HOM05D007621 ORTHO05D009631 4.2e-21 107.8 134 46.3
AagrBONN_evm.TU.Sc2ySwM_340.408 Anthoceros agrestis HOM05D007621 ORTHO05D009631 2.5e-13 82.0 81 55.6
Atru.chr10.2011 Acer truncatum HOM05D007621 ORTHO05D009631 9.4e-13 80.1 49 67.3
EL10Ac8g20531 Beta vulgaris HOM05D007621 ORTHO05D009631 8.0e-12 77.0 101 45.5
SGA_v2.0_scaffold86G26914 Striga asiatica HOM05D007621 ORTHO05D009631 2.3e-11 75.5 57 61.4
MCO11G679 Micromonas commoda HOM05D000032 ORTHO05D028824 2.6e-10 72.0 174 33.3
Sabra04G0020100 Salix brachista HOM05D007621 ORTHO05D009631 8.3e-09 67.0 169 28.4
SGA_v2.0_scaffold26G11386 Striga asiatica HOM05D007621 ORTHO05D009631 4.1e-08 64.7 61 52.5
Cre03.g188750 Chlamydomonas reinhardtii HOM05D000032 ORTHO05D028824 7.0e-08 63.9 206 27.2


User provided reference genes

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