Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g022590 Solanum pennellii HOM05D007447 ORTHO05D009372 2.2e-131 472.6 294 100.0
Solyc02g077690.4 Solanum lycopersicum HOM05D007447 ORTHO05D009372 1.1e-127 460.3 294 88.4
Nitab4.5_0001955g0160 Nicotiana tabacum HOM05D007447 ORTHO05D009372 4.1e-106 388.7 294 73.1
Nitab4.5_0004359g0010 Nicotiana tabacum HOM05D007882 ORTHO05D009870 6.0e-89 331.6 274 67.9
Peaxi162Scf00926g00028 Petunia axillaris HOM05D007447 ORTHO05D009372 5.4e-82 308.5 294 72.4
CAN.G529.53 Capsicum annuum HOM05D007447 ORTHO05D009372 2.9e-67 259.6 192 69.8
Dinv40599 Davidia involucrata HOM05D007447 ORTHO05D009372 1.6e-49 200.7 296 43.6
TAR627G0071 Trochodendron aralioides HOM05D007447 ORTHO05D009372 5.3e-45 185.7 298 42.6
QL05p042219 Quercus lobata HOM05D007447 ORTHO05D009372 7.6e-44 181.8 293 41.0
MSTRG.14713 Avicennia marina HOM05D007447 ORTHO05D009372 1.9e-42 177.2 301 41.5
GSVIVG01021110001 Vitis vinifera HOM05D007447 ORTHO05D009372 4.2e-42 176.0 243 41.2
CSS0015196 Camellia sinensis var. sinensis HOM05D007447 ORTHO05D009372 6.0e-41 172.2 265 39.6
Atru.chr10.1800 Acer truncatum HOM05D007447 ORTHO05D009372 7.9e-41 171.8 249 39.8
RcHm_v2.0_Chr5g0009131 Rosa chinensis HOM05D007447 ORTHO05D009372 2.5e-39 166.8 271 37.6
Thecc.06G181300 Theobroma cacao HOM05D007447 ORTHO05D009372 4.3e-39 166.0 296 37.8
COL.COLO4_31413 Corchorus olitorius HOM05D001455 ORTHO05D001587 3.7e-38 162.9 259 38.6
CiPaw.10G052600 Carya illinoinensis HOM05D007447 ORTHO05D009372 1.4e-37 161.0 232 41.4
Cfa000525 Carpinus fangiana HOM05D007447 ORTHO05D009372 1.8e-37 160.6 284 43.3
PSO675G5366 Papaver somniferum HOM05D007447 ORTHO05D009372 2.6e-36 156.8 257 38.5
PSO675G8572 Papaver somniferum HOM05D007447 ORTHO05D009372 2.6e-36 156.8 257 38.5
Migut.H01471 Erythranthe guttata HOM05D007447 ORTHO05D009372 5.9e-36 155.6 291 38.1
FAN21G3311 Fragaria x ananassa HOM05D001455 ORTHO05D001587 7.6e-36 155.2 252 37.3
FvH4_3g08660 Fragaria vesca HOM05D007447 ORTHO05D009372 1.0e-35 154.8 288 34.7
ClCG03G008020 Citrullus lanatus HOM05D007447 ORTHO05D009372 1.7e-35 154.1 287 35.5
Gorai.011G030100 Gossypium raimondii HOM05D007447 ORTHO05D009372 2.2e-35 153.7 259 35.9
Gohir.D10G028300 Gossypium hirsutum HOM05D007447 ORTHO05D009372 2.9e-35 153.3 259 36.3
TWI63G0216 Tripterygium wilfordii HOM05D007447 ORTHO05D009372 1.4e-34 151.0 257 35.4
PGR042G0911 Punica granatum HOM05D007447 ORTHO05D009372 3.2e-34 149.8 296 35.1
CsaV3_1G012550 Cucumis sativus L. HOM05D007447 ORTHO05D009372 4.2e-34 149.4 263 35.0
FAN16G2340 Fragaria x ananassa HOM05D007447 ORTHO05D009372 4.2e-34 149.4 253 35.6
Nn1g06424 Nelumbo nucifera HOM05D007447 ORTHO05D009372 4.2e-34 149.4 270 39.6
Eucgr.E03244 Eucalyptus grandis HOM05D007447 ORTHO05D009372 5.5e-34 149.1 275 34.2
FAN11G2802 Fragaria x ananassa HOM05D007447 ORTHO05D009372 2.7e-33 146.7 260 35.8
Aqoxy1G02279 Aquilegia oxysepala HOM05D007447 ORTHO05D009372 4.6e-33 146.0 285 35.1
Manes.16G031900 Manihot esculenta HOM05D007447 ORTHO05D009372 1.8e-32 144.1 300 34.3
unitig_61.g26088 Utricularia gibba HOM05D007447 ORTHO05D009372 1.8e-32 144.1 291 35.1
Sed0019225 Sechium edule HOM05D007447 ORTHO05D009372 5.1e-32 142.5 264 36.0
vmacro15930 Vaccinium macrocarpon HOM05D007447 ORTHO05D009372 3.3e-31 139.8 300 33.7
COL.COLO4_14300 Corchorus olitorius HOM05D001061 ORTHO05D006729 5.7e-31 139.0 257 35.8
Ciclev10018161m.g Citrus clementina HOM05D007447 ORTHO05D009372 2.8e-30 136.7 220 37.7
DCAR_008005 Daucus carota HOM05D007447 ORTHO05D009372 6.3e-30 135.6 239 38.5
HanXRQChr08g0213981 Helianthus annuus HOM05D007447 ORTHO05D009372 6.3e-30 135.6 253 36.4
Cc02_g13820 Coffea canephora HOM05D007447 ORTHO05D009372 8.2e-30 135.2 258 36.8
Gohir.A05G159100 Gossypium hirsutum HOM05D007447 ORTHO05D009372 1.1e-29 134.8 253 35.2
Haze_06385 Corylus avellana HOM05D007882 ORTHO05D009870 2.4e-29 133.7 285 34.0
Duzib160G0617 Durio zibethinus HOM05D007447 ORTHO05D009372 5.3e-29 132.5 268 36.9
MD10G1289400 Malus domestica HOM05D007447 ORTHO05D009372 3.4e-28 129.8 292 32.5
Hma1.2p1_0558F.1_g178510 Hydrangea macrophylla HOM05D007447 ORTHO05D009372 5.9e-28 129.0 174 40.8
Psat1g202800 Pisum sativum HOM05D007447 ORTHO05D009372 5.9e-28 129.0 248 33.9
ECA248G3772 Erigeron canadensis HOM05D007447 ORTHO05D009372 1.3e-27 127.9 276 35.9
SalBow7G4252 Salvia bowleyana HOM05D007447 ORTHO05D009372 1.3e-27 127.9 244 34.4
SalBow7G4859 Salvia bowleyana HOM05D007447 ORTHO05D009372 1.3e-27 127.9 244 34.4
CANSAT35G0297 Cannabis sativa HOM05D007447 ORTHO05D009372 1.7e-27 127.5 260 34.6
Actinidia07600 Actinidia chinensis HOM05D007447 ORTHO05D009372 3.8e-27 126.3 242 35.5
Cpa.g.sc27.6 Carica papaya HOM05D007447 ORTHO05D009372 5.0e-27 125.9 237 34.6
Sc17g0005950 Simmondsia chinensis HOM05D007447 ORTHO05D009372 5.0e-27 125.9 247 32.0
VMungo0540G1135 Vigna mungo HOM05D007447 ORTHO05D009372 1.1e-26 124.8 249 31.7
Glyma.13G235800 Glycine max HOM05D007447 ORTHO05D009372 7.2e-26 122.1 276 34.1
Oeu012152.1 Olea europaea HOM05D007447 ORTHO05D009372 7.2e-26 122.1 244 36.1
Thhalv10008438m.g Eutrema salsugineum HOM05D007447 ORTHO05D009372 9.4e-26 121.7 265 33.2
AT1G28410 Arabidopsis thaliana HOM05D007447 ORTHO05D009372 7.9e-25 118.6 267 33.3
AL1G42040 Arabidopsis lyrata HOM05D007447 ORTHO05D009372 1.8e-24 117.5 266 33.8
arahy.Tifrunner.gnm1.ann1.MUCA0D Arachis hypogaea HOM05D007447 ORTHO05D009372 1.8e-24 117.5 272 32.0
arahy.Tifrunner.gnm1.ann1.45S4HY Arachis hypogaea HOM05D007447 ORTHO05D009372 2.3e-24 117.1 272 32.0
Hund23805 Selenicereus undatus HOM05D007447 ORTHO05D009372 5.1e-24 115.9 255 31.4
Medtr2g014440 Medicago truncatula HOM05D007447 ORTHO05D009372 1.1e-23 114.8 268 31.7
Carub.0001s2689 Capsella rubella HOM05D007447 ORTHO05D009372 4.4e-23 112.8 284 30.3
CARHR027920 Cardamine hirsuta HOM05D007447 ORTHO05D009372 1.3e-22 111.3 261 31.8
Aqoxy193s001 Aquilegia oxysepala HOM05D007447 ORTHO05D009372 2.2e-22 110.5 189 36.0
Phvul.006G182400 Phaseolus vulgaris HOM05D007447 ORTHO05D009372 8.2e-22 108.6 249 30.1
Sp1g24690 Schrenkiella parvula HOM05D007447 ORTHO05D009372 3.1e-21 106.7 227 33.5
Lj6g0005430 Lotus japonicus HOM05D007447 ORTHO05D009372 4.1e-21 106.3 262 30.2
TPR.G11645 Trifolium pratense HOM05D007447 ORTHO05D009372 1.7e-19 100.9 186 32.8
Prupe.3G304000 Prunus persica HOM05D007447 ORTHO05D009372 2.2e-19 100.5 251 32.7
Ah.09g237570 Amaranthus hybridus HOM05D007447 ORTHO05D009372 3.2e-18 96.7 290 28.6
Rhsim02G0134600 Rhododendron simsii HOM05D007447 ORTHO05D009372 5.5e-18 95.9 294 27.9
Ca_00359_v3 Cicer arietinum L. HOM05D007447 ORTHO05D009372 7.2e-18 95.5 180 33.9
Gohir.A09G104400 Gossypium hirsutum HOM05D007447 ORTHO05D009372 1.2e-17 94.7 207 30.0
THA.LOC104814436 Tarenaya hassleriana HOM05D007447 ORTHO05D009372 3.6e-17 93.2 269 27.5
EL10Ac8g20436 Beta vulgaris HOM05D007447 ORTHO05D009372 3.3e-15 86.7 290 24.1
MELO3C000075.2 Cucumis melo HOM05D007447 ORTHO05D009372 3.3e-15 86.7 110 43.6
Gohir.A10G027900 Gossypium hirsutum HOM05D007447 ORTHO05D009372 3.3e-15 86.7 104 44.2
MBI06_g04396_MAGBIO Magnolia biondii HOM05D007447 ORTHO05D009372 4.4e-15 86.3 284 30.3
A09p37630 Brassica napus HOM05D007447 ORTHO05D009372 6.3e-14 82.4 230 30.4
Potri.004G048500 Populus trichocarpa HOM05D007447 ORTHO05D009372 6.3e-14 82.4 114 43.0
C05p27420 Brassica napus HOM05D007447 ORTHO05D009372 1.4e-13 81.3 232 27.2
BraA09t39273Z Brassica rapa HOM05D007447 ORTHO05D009372 1.8e-13 80.9 234 28.2
Lalb_Chr18g0059391 Lupinus albus HOM05D007447 ORTHO05D009372 2.4e-13 80.5 275 28.0
BolC5t31458H Brassica oleracea HOM05D007447 ORTHO05D009372 4.1e-13 79.7 221 28.5
AUR62014866 Chenopodium quinoa HOM05D007447 ORTHO05D009372 7.0e-13 79.0 299 24.4
BcaC05g26860 Brassica carinata HOM05D007447 ORTHO05D009372 1.2e-12 78.2 267 27.3
Sabra04G0030400 Salix brachista HOM05D007882 ORTHO05D009870 1.2e-12 78.2 236 26.3
Lsat_1_v5_gn_1_120761 Lactuca sativa HOM05D007447 ORTHO05D009372 7.2e-10 68.9 155 34.8
MELO3C027350.2 Cucumis melo HOM05D007447 ORTHO05D009372 9.4e-10 68.6 65 52.3


User provided reference genes

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