Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g022230 Solanum pennellii HOM05D007006 ORTHO05D008925 3.7e-82 308.1 154 100.0
Solyc02g077310.4 Solanum lycopersicum HOM05D007006 ORTHO05D008925 1.4e-81 306.2 154 99.4
PGSC0003DMG400010717 Solanum tuberosum HOM05D007006 ORTHO05D008925 1.4e-81 306.2 154 99.4
Nitab4.5_0000376g0100 Nicotiana tabacum HOM05D007006 ORTHO05D008925 6.5e-79 297.4 154 95.5
Nitab4.5_0011727g0040 Nicotiana tabacum HOM05D007006 ORTHO05D008925 4.7e-77 291.2 162 90.7
CAN.G79.66 Capsicum annuum HOM05D007006 ORTHO05D008925 1.0e-76 290.0 154 91.6
Oeu001091.1 Olea europaea HOM05D007006 ORTHO05D008925 6.5e-71 270.8 153 86.3
TAR626G0127 Trochodendron aralioides HOM05D007006 ORTHO05D008925 6.5e-71 270.8 153 85.6
MSTRG.7381 Avicennia marina HOM05D007006 ORTHO05D008925 4.2e-70 268.1 153 83.7
Dinv17375 Davidia involucrata HOM05D007006 ORTHO05D008925 4.2e-70 268.1 156 84.6
GSVIVG01021151001 Vitis vinifera HOM05D007006 ORTHO05D008925 5.5e-70 267.7 153 84.3
Nn1g04307 Nelumbo nucifera HOM05D007006 ORTHO05D008925 7.2e-70 267.3 153 83.7
Migut.M01077 Erythranthe guttata HOM05D007006 ORTHO05D008925 9.4e-70 266.9 152 86.2
Actinidia07621 Actinidia chinensis HOM05D007006 ORTHO05D008925 4.7e-69 264.6 153 83.7
CiPaw.10G055000 Carya illinoinensis HOM05D007006 ORTHO05D008925 1.0e-68 263.5 151 84.8
TPR.G31857 Trifolium pratense HOM05D007006 ORTHO05D008925 1.0e-68 263.5 151 83.4
MD10G1285600 Malus domestica HOM05D007006 ORTHO05D008925 1.4e-68 263.1 151 84.8
COL.COLO4_31384 Corchorus olitorius HOM05D007006 ORTHO05D008976 1.8e-68 262.7 153 83.0
Manes.16G034601 Manihot esculenta HOM05D007006 ORTHO05D008925 2.3e-68 262.3 153 83.7
Duzib160G0118 Durio zibethinus HOM05D007006 ORTHO05D008925 3.0e-68 261.9 153 81.7
Hma1.2p1_0155F.1_g068540 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 3.0e-68 261.9 150 86.0
Eucgr.E03165 Eucalyptus grandis HOM05D007006 ORTHO05D008925 4.0e-68 261.5 153 83.0
Gohir.A10G029300 Gossypium hirsutum HOM05D007006 ORTHO05D008925 4.0e-68 261.5 153 83.0
Gohir.D10G029800 Gossypium hirsutum HOM05D007006 ORTHO05D008925 4.0e-68 261.5 153 83.0
Gorai.011G031700 Gossypium raimondii HOM05D007006 ORTHO05D008925 4.0e-68 261.5 153 83.0
CsaV3_1G012640 Cucumis sativus L. HOM05D007006 ORTHO05D008925 5.2e-68 261.2 153 83.0
TWI63G0680 Tripterygium wilfordii HOM05D007006 ORTHO05D008925 5.2e-68 261.2 152 84.2
CSS0027125 Camellia sinensis var. sinensis HOM05D007006 ORTHO05D008925 1.5e-67 259.6 153 81.0
Prupe.4G056000 Prunus persica HOM05D007006 ORTHO05D008925 1.5e-67 259.6 151 82.8
SalBow8G1160 Salvia bowleyana HOM05D007006 ORTHO05D008925 2.0e-67 259.2 150 84.0
Thecc.06G177200 Theobroma cacao HOM05D007006 ORTHO05D008925 2.0e-67 259.2 157 81.5
CARHR225300 Cardamine hirsuta HOM05D007006 ORTHO05D008925 2.6e-67 258.8 153 81.7
arahy.Tifrunner.gnm1.ann1.PE4VQR Arachis hypogaea HOM05D000109 ORTHO05D000965 3.4e-67 258.5 153 82.4
Haze_06320 Corylus avellana HOM05D007006 ORTHO05D008925 3.4e-67 258.5 151 83.4
Thhalv10026439m.g Eutrema salsugineum HOM05D007006 ORTHO05D008925 3.4e-67 258.5 153 81.7
Os01g0242500 Oryza sativa ssp. japonica HOM05D007006 ORTHO05D008925 4.4e-67 258.1 149 83.9
Atru.chr10.1745 Acer truncatum HOM05D007006 ORTHO05D008925 5.7e-67 257.7 153 81.7
Potri.011G062200 Populus trichocarpa HOM05D007006 ORTHO05D008925 5.7e-67 257.7 153 81.0
VMungo0540G0068 Vigna mungo HOM05D007006 ORTHO05D008925 5.7e-67 257.7 153 82.4
AL7G35820 Arabidopsis lyrata HOM05D007006 ORTHO05D008925 7.5e-67 257.3 153 81.0
ECA248G3223 Erigeron canadensis HOM05D007006 ORTHO05D008925 7.5e-67 257.3 150 83.3
Glyma.15G079600 Glycine max HOM05D007006 ORTHO05D008925 7.5e-67 257.3 152 81.6
Phvul.006G179400 Phaseolus vulgaris HOM05D007006 ORTHO05D008925 7.5e-67 257.3 151 81.5
Rhsim02G0152900 Rhododendron simsii HOM05D007006 ORTHO05D008925 7.5e-67 257.3 156 82.7
AT4G18460 Arabidopsis thaliana HOM05D007006 ORTHO05D008925 9.8e-67 256.9 154 81.2
Sed0005765 Sechium edule HOM05D007006 ORTHO05D008925 9.8e-67 256.9 148 81.8
THA.LOC104798412 Tarenaya hassleriana HOM05D007006 ORTHO05D008925 9.8e-67 256.9 153 81.0
BraA01t00989Z Brassica rapa HOM05D007006 ORTHO05D008925 1.3e-66 256.5 154 80.5
Carub.0007s2277 Capsella rubella HOM05D007006 ORTHO05D008925 1.3e-66 256.5 153 81.7
Sp7g15560 Schrenkiella parvula HOM05D007006 ORTHO05D008925 1.3e-66 256.5 153 82.4
CDE02G4743 Ceratophyllum demersum HOM05D007006 ORTHO05D008925 1.7e-66 256.1 150 82.7
Aa31LG6G1200 Aethionema arabicum HOM05D007006 ORTHO05D008925 2.8e-66 255.4 153 80.4
Glyma.13G233500 Glycine max HOM05D007006 ORTHO05D008925 2.8e-66 255.4 152 80.9
FAN21G1832 Fragaria x ananassa HOM05D007006 ORTHO05D008925 3.7e-66 255.0 151 82.8
HanXRQChr01g0008471 Helianthus annuus HOM05D007006 ORTHO05D008925 3.7e-66 255.0 152 81.6
Zm00001eb122370 Zea mays HOM05D007006 ORTHO05D008925 3.7e-66 255.0 148 83.8
ATR0602G073 Amborella trichopoda HOM05D007006 ORTHO05D008925 4.9e-66 254.6 153 81.0
Lj6g0023400 Lotus japonicus HOM05D007006 ORTHO05D008925 8.3e-66 253.8 148 83.8
BolC1t01215H Brassica oleracea HOM05D007006 ORTHO05D008925 2.4e-65 252.3 155 80.0
Psat1g148320 Pisum sativum HOM05D007006 ORTHO05D008925 2.4e-65 252.3 151 80.1
RcHm_v2.0_Chr5g0009821 Rosa chinensis HOM05D007006 ORTHO05D008925 2.4e-65 252.3 148 83.8
BcaC09g51505 Brassica carinata HOM05D007006 ORTHO05D008925 3.1e-65 251.9 154 79.9
Sabra11G0042600 Salix brachista HOM05D007006 ORTHO05D008925 3.1e-65 251.9 166 75.9
Sabra11G0044100 Salix brachista HOM05D007006 ORTHO05D008925 3.1e-65 251.9 166 75.9
PSO210G2152 Papaver somniferum HOM05D007006 ORTHO05D008925 4.1e-65 251.5 153 80.4
Ca_11669_v3 Cicer arietinum L. HOM05D007006 ORTHO05D008925 5.4e-65 251.1 148 81.8
SEGI_08558 Sequoiadendron giganteum HOM05D007006 ORTHO05D008925 5.4e-65 251.1 148 82.4
CANSAT35G1771 Cannabis sativa HOM05D007006 ORTHO05D008925 7.7e-64 247.3 151 77.5
MELO3C002631.2 Cucumis melo HOM05D007006 ORTHO05D008925 1.7e-63 246.1 155 80.0
BcaNung05874 Brassica carinata HOM05D007006 ORTHO05D008925 5.0e-63 244.6 153 77.8
SGA_v2.0_scaffold309G48130 Striga asiatica HOM05D007006 ORTHO05D008925 1.1e-62 243.4 153 80.4
Cc02_g14310 Coffea canephora HOM05D007006 ORTHO05D008925 3.6e-61 238.4 138 84.1
Sc05g0007280 Simmondsia chinensis HOM05D007006 ORTHO05D008925 3.6e-61 238.4 153 77.8
Lj1A1197T80 Lonicera japonica HOM05D007006 ORTHO05D008925 2.3e-60 235.7 156 76.3
HPP92_002943 Vanilla planifolia HOM05D007006 ORTHO05D008925 5.2e-60 234.6 148 79.1
Medtr2g036040 Medicago truncatula HOM05D007006 ORTHO05D008925 6.8e-60 234.2 155 75.5
SGA_v2.0_scaffold309G48148 Striga asiatica HOM05D007006 ORTHO05D008925 1.5e-59 233.0 172 72.1
FvH4_3g08260 Fragaria vesca HOM05D007006 ORTHO05D008925 7.5e-59 230.7 136 83.1
FAN11G3635 Fragaria x ananassa HOM05D007006 ORTHO05D008925 2.9e-58 228.8 134 83.6
FAN16G3644 Fragaria x ananassa HOM05D007006 ORTHO05D008925 2.9e-58 228.8 134 83.6
ClCG03G007950 Citrullus lanatus HOM05D007006 ORTHO05D008925 5.4e-57 224.6 207 60.9
A01p10430 Brassica napus HOM05D007006 ORTHO05D008925 2.0e-56 222.6 155 72.9
Mapoly0096s0066 Marchantia polymorpha HOM05D007006 ORTHO05D008925 1.3e-55 219.9 148 71.6
Eucgr.E02654 Eucalyptus grandis HOM05D007006 ORTHO05D008925 2.3e-55 219.2 145 75.2
Pp3c2_4790 Physcomitrium patens HOM05D007006 ORTHO05D008925 3.9e-55 218.4 138 74.6
Cpa.g.sc7.31 Carica papaya HOM05D007006 ORTHO05D008925 5.0e-55 218.0 129 82.9
SMO356G0615 Selaginella moellendorffii HOM05D007006 ORTHO05D008925 6.6e-55 217.6 151 68.2
C01p12410 Brassica napus HOM05D007006 ORTHO05D008925 8.6e-55 217.2 156 71.8
Ciclev10016962m.g Citrus clementina HOM05D007006 ORTHO05D008925 4.3e-54 214.9 124 83.9
Hund21193 Selenicereus undatus HOM05D007006 ORTHO05D008925 4.3e-54 214.9 129 80.6
CBR_g12914 Chara braunii HOM05D007006 ORTHO05D008925 5.6e-54 214.5 148 70.3
Hma1.2p1_0155F.1_g068550 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 7.3e-54 214.2 151 74.2
CBR_g28086 Chara braunii HOM05D007006 ORTHO05D008925 5.8e-51 204.5 148 66.9
Lsat_1_v5_gn_1_120360 Lactuca sativa HOM05D007006 ORTHO05D008925 5.0e-47 191.4 116 78.4
Peaxi162Scf00875g00318 Petunia axillaris HOM05D007006 ORTHO05D008925 9.5e-46 187.2 108 80.6
Cfa000555 Carpinus fangiana HOM05D007006 ORTHO05D008925 1.8e-44 183.0 170 61.8
EL10Ac8g20473 Beta vulgaris HOM05D007006 ORTHO05D008925 1.2e-43 180.3 153 62.7
DCAR_004029 Daucus carota HOM05D007006 ORTHO05D008925 7.1e-41 171.0 102 76.5
AUR62031124 Chenopodium quinoa HOM05D007006 ORTHO05D008925 9.2e-41 170.6 153 59.5
RcHm_v2.0_Chr5g0007981 Rosa chinensis HOM05D007006 ORTHO05D008925 1.6e-40 169.9 124 71.8
Cre12.g542000 Chlamydomonas reinhardtii HOM05D007006 ORTHO05D008925 1.0e-39 167.2 152 56.6
AUR62014917 Chenopodium quinoa HOM05D007006 ORTHO05D008925 1.5e-38 163.3 153 57.5
MCO06G160 Micromonas commoda HOM05D007006 ORTHO05D008925 4.7e-37 158.3 162 53.1
PGR042G2307 Punica granatum HOM05D007006 ORTHO05D008925 7.1e-33 144.4 86 77.9
PSO832G1055 Papaver somniferum HOM05D007006 ORTHO05D008925 1.2e-32 143.7 86 80.2
Lalb_Chr20g0121401 Lupinus albus HOM05D007006 ORTHO05D008925 1.6e-32 143.3 79 81.0
MBI06_g25712_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 4.6e-32 141.7 88 77.3
Haze_27122 Corylus avellana HOM05D007006 ORTHO05D008925 5.1e-31 138.3 148 45.9
PRCOL_00003508 Prasinoderma coloniale HOM05D007006 ORTHO05D008925 5.6e-30 134.8 149 50.3
SGA_v2.0_scaffold309G48132 Striga asiatica HOM05D007006 ORTHO05D008925 5.3e-20 101.7 57 84.2
CBR_g41520 Chara braunii HOM05D000019 ORTHO05D000002 4.4e-19 98.6 72 65.3
Actinidia39491 Actinidia chinensis HOM05D007006 ORTHO05D008925 1.2e-16 90.5 79 63.3
MBI06_g25714_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 2.9e-10 69.3 42 81.0


User provided reference genes

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