Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g022090 Solanum pennellii HOM05D007489 ORTHO05D008037 0.0e+00 1444.1 853 100.0
CAN.G79.55 Capsicum annuum HOM05D007489 ORTHO05D008037 0.0e+00 1101.3 853 75.6
Nitab4.5_0001928g0060 Nicotiana tabacum HOM05D007489 ORTHO05D008037 1.1e-263 913.7 847 66.4
Nitab4.5_0000376g0220 Nicotiana tabacum HOM05D007489 ORTHO05D008037 5.8e-185 652.1 850 53.3
Solyc02g077210.1 Solanum lycopersicum HOM05D007489 ORTHO05D008037 9.4e-135 485.3 271 95.9
Peaxi162Scf00223g01419 Petunia axillaris HOM05D007489 ORTHO05D008037 2.6e-84 317.8 308 59.7
CSS0034374 Camellia sinensis var. sinensis HOM05D007489 ORTHO05D008037 8.1e-70 269.6 890 30.9
PGSC0003DMG400022951 Solanum tuberosum HOM05D007489 ORTHO05D008037 2.7e-65 254.6 170 87.1
Dinv40650 Davidia involucrata HOM05D007489 ORTHO05D008037 6.2e-62 243.4 880 29.7
Hma1.2p1_0155F.1_g068400 Hydrangea macrophylla HOM05D007489 ORTHO05D008037 5.8e-60 236.9 897 29.8
Rhsim02G0140400 Rhododendron simsii HOM05D007489 ORTHO05D008037 8.7e-56 223.0 916 28.4
Oeu041109.2 Olea europaea HOM05D007489 ORTHO05D008037 1.5e-55 222.2 961 27.7
TAR627G1016 Trochodendron aralioides HOM05D007489 ORTHO05D008037 3.6e-54 217.6 900 29.3
Peaxi162Scf00223g01422 Petunia axillaris HOM05D007489 ORTHO05D008037 3.4e-52 211.1 263 65.8
Lj1A1196T41 Lonicera japonica HOM05D007489 ORTHO05D008037 7.6e-52 209.9 834 28.5
Prupe.4G057700 Prunus persica HOM05D007489 ORTHO05D008037 4.9e-51 207.2 861 28.7
Duzib235G0638 Durio zibethinus HOM05D007489 ORTHO05D008037 2.1e-49 201.8 888 27.9
MD10G1283800 Malus domestica HOM05D007489 ORTHO05D008037 3.5e-49 201.1 872 28.0
TPR.G16271 Trifolium pratense HOM05D007489 ORTHO05D008037 3.1e-45 188.0 867 28.3
HanXRQChr11g0327141 Helianthus annuus HOM05D007489 ORTHO05D008037 1.5e-44 185.7 871 27.8
ECA234G3308 Erigeron canadensis HOM05D007489 ORTHO05D008037 2.2e-43 181.8 883 28.5
ClCG01G023550 Citrullus lanatus HOM05D007489 ORTHO05D008037 2.9e-43 181.4 864 27.8
RcHm_v2.0_Chr7g0215591 Rosa chinensis HOM05D007489 ORTHO05D008037 6.4e-43 180.3 872 27.1
Lsat_1_v5_gn_4_50401 Lactuca sativa HOM05D007489 ORTHO05D008037 8.4e-43 179.9 916 27.1
Duzib192G0524 Durio zibethinus HOM05D007489 ORTHO05D008037 1.1e-42 179.5 879 29.4
Medtr4g087875 Medicago truncatula HOM05D007489 ORTHO05D008037 1.4e-42 179.1 878 30.4
Manes.16G035700 Manihot esculenta HOM05D007489 ORTHO05D008037 7.1e-42 176.8 966 25.2
Potri.011G063500 Populus trichocarpa HOM05D007489 ORTHO05D008037 7.1e-42 176.8 858 27.2
FAN08G0692 Fragaria x ananassa HOM05D007489 ORTHO05D008037 1.0e-40 172.9 907 26.8
FAN04G2784 Fragaria x ananassa HOM05D007489 ORTHO05D008037 2.1e-38 165.2 903 26.4
FvH4_5g26040 Fragaria vesca HOM05D007489 ORTHO05D008037 2.8e-38 164.9 889 27.2
Gohir.D10G031400 Gossypium hirsutum HOM05D007489 ORTHO05D008037 4.8e-38 164.1 861 26.8
Sed0003654 Sechium edule HOM05D007489 ORTHO05D008037 4.8e-38 164.1 853 27.7
RcHm_v2.0_Chr7g0216741 Rosa chinensis HOM05D007489 ORTHO05D008037 6.2e-38 163.7 881 26.4
Nn1g09012 Nelumbo nucifera HOM05D007489 ORTHO05D008037 1.8e-37 162.2 859 27.0
MELO3C007230.2 Cucumis melo HOM05D007489 ORTHO05D008037 2.4e-37 161.8 861 27.2
Sabra11G0045300 Salix brachista HOM05D007489 ORTHO05D008037 4.0e-37 161.0 923 26.1
Sc05g0007220 Simmondsia chinensis HOM05D007489 ORTHO05D008037 1.7e-35 155.6 883 26.0
FAN18G0613 Fragaria x ananassa HOM05D007489 ORTHO05D008037 8.4e-35 153.3 903 26.0
Migut.J01535 Erythranthe guttata HOM05D007489 ORTHO05D008037 2.5e-34 151.8 826 26.0
Glyma.07G204500 Glycine max HOM05D007489 ORTHO05D008037 1.2e-33 149.4 873 27.0
PGR004G0633 Punica granatum HOM05D007489 ORTHO05D008037 3.5e-33 147.9 863 26.0
Aqoxy5G02160 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 7.9e-33 146.7 862 25.9
PSO063G1126 Papaver somniferum HOM05D007489 ORTHO05D008037 1.1e-31 142.9 950 26.0
arahy.Tifrunner.gnm1.ann1.S0ULK2 Arachis hypogaea HOM05D007489 ORTHO05D008037 1.9e-31 142.1 846 27.4
SalBow6G3268 Salvia bowleyana HOM05D007489 ORTHO05D008037 2.5e-31 141.7 876 25.2
SalBow6G6000 Salvia bowleyana HOM05D007489 ORTHO05D008037 7.4e-31 140.2 878 24.9
Lj4g0021888 Lotus japonicus HOM05D007489 ORTHO05D008037 1.6e-30 139.0 865 26.6
Thecc.06G175600 Theobroma cacao HOM05D007489 ORTHO05D008037 2.1e-30 138.7 842 26.8
Phvul.003G057800 Phaseolus vulgaris HOM05D007489 ORTHO05D008037 3.4e-28 131.3 865 26.1
AL7G35790 Arabidopsis lyrata HOM05D010718 ORTHO05D008037 7.6e-28 130.2 877 24.4
A03p51330 Brassica napus HOM05D010718 ORTHO05D008037 7.6e-28 130.2 879 23.9
Thhalv10024499m.g Eutrema salsugineum HOM05D010718 ORTHO05D008037 1.3e-27 129.4 873 25.1
Atru.chr10.1727 Acer truncatum HOM05D007489 ORTHO05D008037 2.9e-27 128.3 254 36.2
Lalb_Chr16g0384211 Lupinus albus HOM05D007489 ORTHO05D008037 1.1e-26 126.3 136 55.1
Gorai.011G033000 Gossypium raimondii HOM05D007489 ORTHO05D008037 1.9e-26 125.6 857 24.7
AUR62036546 Chenopodium quinoa HOM05D007489 ORTHO05D008037 4.2e-26 124.4 883 27.1
unitig_0.g132 Utricularia gibba HOM05D007489 ORTHO05D008037 4.2e-26 124.4 134 50.7
Gohir.A10G030500 Gossypium hirsutum HOM05D007489 ORTHO05D008037 5.5e-26 124.0 820 25.0
BcaC06g30581 Brassica carinata HOM05D010718 ORTHO05D008037 2.1e-25 122.1 876 23.5
AT4G18490 Arabidopsis thaliana HOM05D010718 ORTHO05D008037 1.0e-24 119.8 881 23.5
CARHR225330 Cardamine hirsuta HOM05D010718 ORTHO05D008037 3.0e-24 118.2 870 28.4
EL10Ac8g20488 Beta vulgaris HOM05D007489 ORTHO05D008037 1.5e-23 115.9 886 23.8
Ca_26049_v3 Cicer arietinum L. HOM05D007489 ORTHO05D008037 1.5e-23 115.9 847 25.6
CiPaw.10G057000 Carya illinoinensis HOM05D007489 ORTHO05D008037 1.9e-23 115.5 341 32.3
CANSAT54G0123 Cannabis sativa HOM05D007489 ORTHO05D008037 7.4e-23 113.6 899 24.1
QL05p044409 Quercus lobata HOM05D007489 ORTHO05D008037 1.3e-22 112.8 180 41.7
GSVIVG01021171001 Vitis vinifera HOM05D007489 ORTHO05D008037 1.3e-22 112.8 260 33.8
PGR004G2208 Punica granatum HOM05D007489 ORTHO05D008037 4.8e-22 110.9 125 51.2
Haze_06275 Corylus avellana HOM05D007489 ORTHO05D008037 8.2e-22 110.2 853 25.2
BraA03t14214Z Brassica rapa HOM05D010718 ORTHO05D008037 1.1e-21 109.8 877 22.5
Hund23951 Selenicereus undatus HOM05D007489 ORTHO05D008037 3.1e-21 108.2 141 47.5
CsaV3_6G050690 Cucumis sativus L. HOM05D007489 ORTHO05D008037 1.5e-20 105.9 928 25.5
Aa31LG6G1240 Aethionema arabicum HOM05D010718 ORTHO05D008037 4.5e-20 104.4 858 25.1
BolC7t45475H Brassica oleracea HOM05D010718 ORTHO05D008037 1.3e-19 102.8 875 21.7
VMungo0251G2273 Vigna mungo HOM05D007489 ORTHO05D008037 3.8e-19 101.3 113 53.1
BcaNung02709 Brassica carinata HOM05D010718 ORTHO05D008037 6.5e-19 100.5 875 22.1
MBI06_g31401_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 1.4e-18 99.4 132 46.2
SGA_v2.0_scaffold66G22379 Striga asiatica HOM05D007489 ORTHO05D008037 3.2e-18 98.2 919 22.7
Carub.0007s2274 Capsella rubella HOM05D010718 ORTHO05D008037 9.4e-18 96.7 882 22.3
arahy.Tifrunner.gnm1.ann1.X1E7Z2 Arachis hypogaea HOM05D007489 ORTHO05D008037 1.2e-17 96.3 843 25.3
Sp7g15530 Schrenkiella parvula HOM05D010718 ORTHO05D008037 1.6e-17 95.9 877 22.3
Glyma.13G171550 Glycine max HOM05D007489 ORTHO05D008037 2.7e-17 95.1 142 42.3
C07p49740 Brassica napus HOM05D010718 ORTHO05D008037 3.6e-17 94.7 875 21.8
MD05G1304700 Malus domestica HOM05D007489 ORTHO05D008037 3.6e-17 94.7 151 43.0
COL.COLO4_31347 Corchorus olitorius HOM05D007489 ORTHO05D008037 6.1e-17 94.0 921 27.9
FAN13G1982 Fragaria x ananassa HOM05D007489 ORTHO05D008037 1.0e-16 93.2 849 25.6
C01p12440 Brassica napus HOM05D010718 ORTHO05D008037 1.8e-16 92.4 910 24.3
DCAR_007972 Daucus carota HOM05D007489 ORTHO05D008037 3.0e-16 91.7 104 48.1
DCAR_004024 Daucus carota HOM05D007489 ORTHO05D008037 1.5e-15 89.4 337 30.9
MBI06_g31402_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 1.4e-13 82.8 597 24.5
Os01g0755100 Oryza sativa ssp. japonica HOM05D007489 ORTHO05D008037 1.8e-13 82.4 854 24.5
Ciclev10017982m.g Citrus clementina HOM05D007489 ORTHO05D008037 4.1e-13 81.3 103 43.7
SEGI_30603 Sequoiadendron giganteum HOM05D007489 ORTHO05D008037 6.9e-13 80.5 111 46.8
BraA01t00996Z Brassica rapa HOM05D010718 ORTHO05D008037 2.0e-12 79.0 887 25.0
A01p10500 Brassica napus HOM05D010718 ORTHO05D008037 7.7e-12 77.0 890 24.5
Zm00001eb152860 Zea mays HOM05D007489 ORTHO05D008037 3.8e-11 74.7 146 41.8
Aqoxy534s001 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 1.4e-10 72.8 79 49.4
HPP92_008016 Vanilla planifolia HOM05D007489 ORTHO05D008037 2.5e-10 72.0 143 37.8
PSO782G2467 Papaver somniferum HOM05D007489 ORTHO05D008037 5.5e-10 70.9 92 50.0
SalBow1G4805 Salvia bowleyana HOM05D007489 ORTHO05D008037 1.4e-08 66.2 74 45.9
SalBow2G2687 Salvia bowleyana HOM05D007489 ORTHO05D008037 1.4e-08 66.2 64 51.6
ATR0602G208 Amborella trichopoda HOM05D007489 ORTHO05D008037 2.3e-08 65.5 815 22.2
AUR62031141 Chenopodium quinoa HOM05D007489 ORTHO05D008037 6.7e-08 63.9 101 43.6
HPP92_007965 Vanilla planifolia HOM05D007489 ORTHO05D008037 1.5e-07 62.8 123 37.4
SMO356G0683 Selaginella moellendorffii HOM05D029666 ORTHO05D008037 3.3e-07 61.6 79 45.6
arahy.Tifrunner.gnm1.ann1.8IS92U Arachis hypogaea HOM05D007489 ORTHO05D008037 5.7e-07 60.8 64 51.6
SMO340G0226 Selaginella moellendorffii HOM05D029666 ORTHO05D008037 7.4e-07 60.5 57 52.6
Glyma.13G171600 Glycine max HOM05D007489 ORTHO05D008037 9.7e-07 60.1 71 53.5


User provided reference genes

Program Settings