Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g020000 Solanum pennellii HOM05D008090 ORTHO05D010156 2.4e-87 325.5 166 100.0
Solyc02g070900.1 Solanum lycopersicum HOM05D008090 ORTHO05D010156 2.1e-46 189.5 156 65.4
Nitab4.5_0006300g0040 Nicotiana tabacum HOM05D008090 ORTHO05D010156 4.8e-43 178.3 177 58.8
PGSC0003DMG400008320 Solanum tuberosum HOM05D008090 ORTHO05D010156 5.3e-42 174.9 156 60.9
CAN.G257.11 Capsicum annuum HOM05D008090 ORTHO05D010156 6.9e-42 174.5 155 61.3
Sopen02g019980 Solanum pennellii HOM05D008090 ORTHO05D010156 7.6e-41 171.0 156 60.3
Nitab4.5_0029367g0010 Nicotiana tabacum HOM05D008090 ORTHO05D010156 1.9e-36 156.4 159 57.9
Peaxi162Scf00347g00042 Petunia axillaris HOM05D008090 ORTHO05D010156 2.5e-23 112.8 153 50.3
Lj1P1184T52 Lonicera japonica HOM05D008090 ORTHO05D010156 1.4e-15 87.0 162 38.3
Cc09_g09530 Coffea canephora HOM05D008090 ORTHO05D010156 2.7e-14 82.8 159 35.2
Dinv30710 Davidia involucrata HOM05D000133 ORTHO05D010156 1.8e-13 80.1 179 33.5
Manes.17G067400 Manihot esculenta HOM05D008090 ORTHO05D010156 5.1e-13 78.6 178 34.8
ClCG03G006940 Citrullus lanatus HOM05D008090 ORTHO05D010156 6.7e-13 78.2 176 35.2
Haze_05542 Corylus avellana HOM05D008090 ORTHO05D010156 4.3e-12 75.5 166 35.5
Thecc.06G154700 Theobroma cacao HOM05D008090 ORTHO05D010156 1.3e-11 73.9 169 35.5
MSTRG.7470 Avicennia marina HOM05D008090 ORTHO05D010156 1.7e-11 73.6 176 34.7
MELO3C002726.2 Cucumis melo HOM05D008090 ORTHO05D010156 1.7e-11 73.6 174 33.9
Sabra04G0043800 Salix brachista HOM05D008090 ORTHO05D010156 2.8e-11 72.8 155 34.2
TAR629G2487 Trochodendron aralioides HOM05D008090 ORTHO05D010156 2.8e-11 72.8 168 36.3
Cfa000975 Carpinus fangiana HOM05D008090 ORTHO05D010156 3.7e-11 72.4 162 33.3
Gohir.A06G136400 Gossypium hirsutum HOM05D008090 ORTHO05D010156 3.7e-11 72.4 159 35.2
CsaV3_1G032520 Cucumis sativus L. HOM05D008090 ORTHO05D010156 6.3e-11 71.6 175 34.3
Potri.004G065500 Populus trichocarpa HOM05D008090 ORTHO05D010156 6.3e-11 71.6 159 34.6
Gohir.D06G141600 Gossypium hirsutum HOM05D008090 ORTHO05D010156 8.2e-11 71.2 162 35.8
Gorai.010G165200 Gossypium raimondii HOM05D008090 ORTHO05D010156 8.2e-11 71.2 162 35.8
Sed0014565 Sechium edule HOM05D008090 ORTHO05D010156 8.2e-11 71.2 171 35.7
QL05p059335 Quercus lobata HOM05D008090 ORTHO05D010156 1.1e-10 70.9 169 34.3
Prupe.4G076400 Prunus persica HOM05D008090 ORTHO05D010156 2.4e-10 69.7 174 34.5
EL10Ac4g09546 Beta vulgaris HOM05D008090 ORTHO05D010156 3.1e-10 69.3 166 37.3
Migut.M00932 Erythranthe guttata HOM05D008090 ORTHO05D010156 6.9e-10 68.2 184 31.5
COL.COLO4_06066 Corchorus olitorius HOM05D008090 ORTHO05D010156 3.4e-09 65.9 170 33.5
Hund17789 Selenicereus undatus HOM05D008090 ORTHO05D010156 3.4e-09 65.9 167 32.9
AUR62035141 Chenopodium quinoa HOM05D008090 ORTHO05D010156 1.3e-08 63.9 164 35.4
Sc17g0005080 Simmondsia chinensis HOM05D008090 ORTHO05D010156 1.3e-08 63.9 173 34.7
FAN25G1154 Fragaria x ananassa HOM05D008090 ORTHO05D010156 1.7e-08 63.5 177 29.9
Lalb_Chr03g0037351 Lupinus albus HOM05D008090 ORTHO05D010156 1.7e-08 63.5 155 31.0
Actinidia19510 Actinidia chinensis HOM05D008090 ORTHO05D010156 1.9e-07 60.1 137 37.2
Lj2P974T32 Lonicera japonica HOM05D008090 ORTHO05D010156 1.9e-07 60.1 122 33.6
ECA234G1353 Erigeron canadensis HOM05D008090 ORTHO05D010156 2.5e-07 59.7 147 34.7
RcHm_v2.0_Chr5g0013271 Rosa chinensis HOM05D008090 ORTHO05D010156 2.5e-07 59.7 173 29.5
FAN16G3306 Fragaria x ananassa HOM05D008090 ORTHO05D010156 4.2e-07 58.9 176 28.4
Lj4g0014733 Lotus japonicus HOM05D008090 ORTHO05D010156 7.2e-07 58.2 173 33.5
MBI07_g21779_MAGBIO Magnolia biondii HOM05D008090 ORTHO05D010156 9.4e-07 57.8 166 28.9
MBI19_g47931_MAGBIO Magnolia biondii HOM05D008090 ORTHO05D010156 9.4e-07 57.8 169 30.8
Psat7g091840 Pisum sativum HOM05D008090 ORTHO05D010156 1.2e-06 57.4 163 32.5
SGA_v2.0_scaffold1G00152 Striga asiatica HOM05D008090 ORTHO05D010156 1.2e-06 57.4 166 31.9
MD05G1289100 Malus domestica HOM05D008090 ORTHO05D010156 1.6e-06 57.0 173 28.9
CANSAT35G0881 Cannabis sativa HOM05D008090 ORTHO05D010156 2.7e-06 56.2 147 32.7
TPR.G4884 Trifolium pratense HOM05D000133 ORTHO05D000259 2.7e-06 56.2 159 34.0
PGSC0003DMG400008321 Solanum tuberosum HOM05D008090 ORTHO05D010156 3.6e-06 55.8 46 56.5
RcHm_v2.0_Chr5g0013301 Rosa chinensis HOM05D008090 ORTHO05D010156 4.7e-06 55.5 174 29.3
Atru.chr10.1349 Acer truncatum HOM05D008090 ORTHO05D010156 6.1e-06 55.1 83 45.8
Nn3g17305 Nelumbo nucifera HOM05D008090 ORTHO05D010156 6.1e-06 55.1 175 32.0


User provided reference genes

Program Settings