Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g019900 Solanum pennellii HOM05D007650 ORTHO05D009695 1.8e-64 249.2 137 100.0
Sopen02g019910 Solanum pennellii HOM05D007650 ORTHO05D009695 3.7e-57 224.9 125 98.4
Solyc02g070800.2 Solanum lycopersicum HOM05D007650 ORTHO05D009695 1.1e-56 223.4 125 96.8
PGSC0003DMG400008313 Solanum tuberosum HOM05D007650 ORTHO05D009695 2.4e-56 222.2 125 97.6
Sopen02g019890 Solanum pennellii HOM05D007650 ORTHO05D009695 5.3e-56 221.1 125 96.8
CAN.G257.1 Capsicum annuum HOM05D007650 ORTHO05D009695 1.5e-55 219.5 125 96.0
Nitab4.5_0001040g0130 Nicotiana tabacum HOM05D007650 ORTHO05D009695 4.2e-53 211.5 125 93.6
Peaxi162Scf00796g00117 Petunia axillaris HOM05D007650 ORTHO05D009695 7.1e-53 210.7 125 92.0
Nitab4.5_0001655g0220 Nicotiana tabacum HOM05D007650 ORTHO05D009695 3.0e-51 205.3 125 91.2
Cc09_g08850 Coffea canephora HOM05D007650 ORTHO05D009695 5.5e-45 184.5 125 82.4
Migut.H01373 Erythranthe guttata HOM05D007650 ORTHO05D009695 4.6e-44 181.4 125 80.0
Hma1.2p1_0137F.1_g062480 Hydrangea macrophylla HOM05D007650 ORTHO05D009695 4.6e-44 181.4 122 80.3
Duzib192G0135 Durio zibethinus HOM05D007650 ORTHO05D009695 1.8e-43 179.5 116 83.6
QL05p059009 Quercus lobata HOM05D007650 ORTHO05D009695 3.0e-43 178.7 124 80.6
Dinv30717 Davidia involucrata HOM05D007650 ORTHO05D009695 3.9e-43 178.3 122 79.5
Actinidia19514 Actinidia chinensis HOM05D007650 ORTHO05D009695 5.1e-43 177.9 113 85.8
Actinidia16723 Actinidia chinensis HOM05D007650 ORTHO05D009695 6.7e-43 177.6 113 85.8
Lj1A1185T62 Lonicera japonica HOM05D007650 ORTHO05D009695 6.7e-43 177.6 125 80.8
Rhsim13G0193900 Rhododendron simsii HOM05D007650 ORTHO05D009695 6.7e-43 177.6 125 78.4
Sabra11G0064400 Salix brachista HOM05D007650 ORTHO05D009695 6.7e-43 177.6 125 80.0
Gohir.D06G204800 Gossypium hirsutum HOM05D007650 ORTHO05D009695 1.1e-42 176.8 116 81.0
Gorai.010G238900 Gossypium raimondii HOM05D007650 ORTHO05D009695 1.1e-42 176.8 116 81.0
Atru.chr10.1319 Acer truncatum HOM05D007650 ORTHO05D009695 1.5e-42 176.4 126 79.4
FvH4_3g05890 Fragaria vesca HOM05D007650 ORTHO05D009695 1.5e-42 176.4 111 86.5
Potri.011G080900 Populus trichocarpa HOM05D007650 ORTHO05D009695 1.5e-42 176.4 125 79.2
Prupe.4G078000 Prunus persica HOM05D007650 ORTHO05D009695 1.5e-42 176.4 122 77.9
DCAR_005107 Daucus carota HOM05D007650 ORTHO05D009695 2.5e-42 175.6 125 76.8
MD05G1286900 Malus domestica HOM05D007650 ORTHO05D009695 2.5e-42 175.6 125 77.6
COL.COLO4_38298 Corchorus olitorius HOM05D007650 ORTHO05D009695 3.3e-42 175.3 125 76.8
Thecc.06G153200 Theobroma cacao HOM05D007650 ORTHO05D009695 3.3e-42 175.3 114 83.3
Gohir.A06G197300 Gossypium hirsutum HOM05D007650 ORTHO05D009695 4.3e-42 174.9 116 80.2
FAN16G2223 Fragaria x ananassa HOM05D007650 ORTHO05D009695 5.7e-42 174.5 111 84.7
RcHm_v2.0_Chr5g0013551 Rosa chinensis HOM05D007650 ORTHO05D009695 5.7e-42 174.5 110 86.4
FAN11G2937 Fragaria x ananassa HOM05D007650 ORTHO05D009695 7.4e-42 174.1 111 85.6
FAN21G2668 Fragaria x ananassa HOM05D007650 ORTHO05D009695 7.4e-42 174.1 111 85.6
TWI09G0653 Tripterygium wilfordii HOM05D007650 ORTHO05D009695 7.4e-42 174.1 122 78.7
VMungo0251G1744 Vigna mungo HOM05D007650 ORTHO05D009695 7.4e-42 174.1 118 78.8
Phvul.002G194800 Phaseolus vulgaris HOM05D007650 ORTHO05D009695 9.7e-42 173.7 118 79.7
TAR629G0225 Trochodendron aralioides HOM05D007650 ORTHO05D009695 9.7e-42 173.7 118 80.5
Ca_18274_v3 Cicer arietinum L. HOM05D007650 ORTHO05D009695 1.3e-41 173.3 110 86.4
Medtr4g094625 Medicago truncatula HOM05D007650 ORTHO05D009695 1.3e-41 173.3 110 86.4
ClCG01G024480 Citrullus lanatus HOM05D007650 ORTHO05D009695 1.7e-41 172.9 125 79.2
SalBow7G1373 Salvia bowleyana HOM05D007650 ORTHO05D009695 1.7e-41 172.9 123 78.0
vmacro09097 Vaccinium macrocarpon HOM05D007650 ORTHO05D009695 1.7e-41 172.9 125 76.8
TPR.G4852 Trifolium pratense HOM05D007650 ORTHO05D009695 2.2e-41 172.6 113 83.2
CANSAT35G2040 Cannabis sativa HOM05D007650 ORTHO05D009695 2.8e-41 172.2 110 85.5
HanXRQChr17g0565021 Helianthus annuus HOM05D007650 ORTHO05D009695 2.8e-41 172.2 122 78.7
MBI07_g15281_MAGBIO Magnolia biondii HOM05D007650 ORTHO05D009695 2.8e-41 172.2 115 81.7
Psat7g090640 Pisum sativum HOM05D007650 ORTHO05D009695 2.8e-41 172.2 116 81.0
Lsat_1_v5_gn_4_30200 Lactuca sativa HOM05D007650 ORTHO05D009695 3.7e-41 171.8 110 85.5
Oeu040111.1 Olea europaea HOM05D007650 ORTHO05D009695 3.7e-41 171.8 125 76.8
EL10As10g23973 Beta vulgaris HOM05D007650 ORTHO05D009695 8.2e-41 170.6 122 75.4
Manes.17G068200 Manihot esculenta HOM05D007650 ORTHO05D009695 8.2e-41 170.6 113 81.4
ECA234G0548 Erigeron canadensis HOM05D007650 ORTHO05D009695 1.1e-40 170.2 125 77.6
Lj4g0007964 Lotus japonicus HOM05D007650 ORTHO05D009695 1.1e-40 170.2 107 86.0
Haze_05565 Corylus avellana HOM05D007650 ORTHO05D009695 1.4e-40 169.9 117 81.2
Os05g0565400 Oryza sativa ssp. japonica HOM05D007650 ORTHO05D009695 1.8e-40 169.5 112 80.4
MELO3C007146.2 Cucumis melo HOM05D007650 ORTHO05D009695 3.1e-40 168.7 107 86.0
CiPaw.09G126000 Carya illinoinensis HOM05D007650 ORTHO05D009695 9.1e-40 167.2 118 78.8
Eucgr.D00307 Eucalyptus grandis HOM05D007650 ORTHO05D009695 9.1e-40 167.2 112 83.0
arahy.Tifrunner.gnm1.ann1.IH3VZP Arachis hypogaea HOM05D007650 ORTHO05D009695 1.2e-39 166.8 111 83.8
CsaV3_6G051610 Cucumis sativus L. HOM05D007650 ORTHO05D009695 1.2e-39 166.8 107 85.0
Cfa000966 Carpinus fangiana HOM05D007650 ORTHO05D009695 1.5e-39 166.4 115 80.9
Nn3g20684 Nelumbo nucifera HOM05D007650 ORTHO05D009695 1.5e-39 166.4 107 82.2
ATR0585G132 Amborella trichopoda HOM05D007650 ORTHO05D009695 2.0e-39 166.0 112 80.4
Glyma.08G083700 Glycine max HOM05D007650 ORTHO05D009695 2.0e-39 166.0 107 83.2
Zm00001eb296000 Zea mays HOM05D007650 ORTHO05D009695 2.0e-39 166.0 112 79.5
Glyma.05G129100 Glycine max HOM05D007650 ORTHO05D009695 5.9e-39 164.5 107 83.2
CDE02G4320 Ceratophyllum demersum HOM05D007650 ORTHO05D009695 7.7e-39 164.1 107 83.2
arahy.Tifrunner.gnm1.ann1.HZCZ32 Arachis hypogaea HOM05D007650 ORTHO05D009695 1.3e-38 163.3 119 79.0
Lalb_Chr07g0188691 Lupinus albus HOM05D007650 ORTHO05D009695 2.9e-38 162.2 110 81.8
unitig_21.g20640 Utricularia gibba HOM05D007650 ORTHO05D009695 2.9e-38 162.2 109 81.7
Hund21519 Selenicereus undatus HOM05D007650 ORTHO05D009695 6.5e-38 161.0 116 75.0
PGR083G1882 Punica granatum HOM05D007650 ORTHO05D009695 8.5e-38 160.6 110 80.0
Aqoxy4G00120 Aquilegia oxysepala HOM05D007650 ORTHO05D009695 1.1e-37 160.2 111 75.7
GSVIVG01021423001 Vitis vinifera HOM05D007650 ORTHO05D009695 1.4e-37 159.8 118 76.3
Sc17g0005010 Simmondsia chinensis HOM05D007650 ORTHO05D009695 9.4e-37 157.1 129 69.8
SMO174G0197 Selaginella moellendorffii HOM05D007650 ORTHO05D009695 2.7e-36 155.6 118 68.6
AagrBONN_evm.TU.Sc2ySwM_117.3317 Anthoceros agrestis HOM05D007650 ORTHO05D009695 7.9e-36 154.1 109 75.2
HPP92_024569 Vanilla planifolia HOM05D007650 ORTHO05D009695 3.0e-35 152.1 104 80.8
Mapoly0064s0064 Marchantia polymorpha HOM05D007650 ORTHO05D009695 4.4e-34 148.3 116 69.0
Ah.14g086550 Amaranthus hybridus HOM05D007650 ORTHO05D009695 5.3e-32 141.4 97 80.4
QL05p059017 Quercus lobata HOM05D007650 ORTHO05D009695 7.7e-31 137.5 120 67.5
AUR62030238 Chenopodium quinoa HOM05D007650 ORTHO05D009695 1.1e-29 133.7 122 62.3
TAR629G3449 Trochodendron aralioides HOM05D007650 ORTHO05D009695 1.0e-22 110.5 100 65.0
AUR62027602 Chenopodium quinoa HOM05D007650 ORTHO05D009695 3.2e-21 105.5 122 54.1
Pp3c2_34550 Physcomitrium patens HOM05D007650 ORTHO05D009695 2.8e-17 92.4 68 70.6
TAR629G1582 Trochodendron aralioides HOM05D007650 ORTHO05D009695 5.0e-14 81.6 67 67.2
CBR_g31268 Chara braunii HOM05D007650 ORTHO05D009695 3.0e-11 72.4 111 41.4
Sed0021228 Sechium edule HOM05D007650 ORTHO05D009695 3.4e-10 68.9 40 85.0
CAN.G84.7 Capsicum annuum HOM05D007650 ORTHO05D009695 5.7e-10 68.2 49 73.5
CAN.G637.51 Capsicum annuum HOM05D007650 ORTHO05D009695 1.7e-09 66.6 40 85.0


User provided reference genes

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