Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g019650 Solanum pennellii HOM05D006050 ORTHO05D007457 2.2e-140 502.3 258 100.0
Solyc02g070560.3 Solanum lycopersicum HOM05D006050 ORTHO05D007457 3.7e-127 458.4 326 77.0
CAN.G650.1 Capsicum annuum HOM05D006050 ORTHO05D007457 1.0e-100 370.5 332 65.1
Nitab4.5_0009607g0030 Nicotiana tabacum HOM05D006050 ORTHO05D007457 1.6e-93 346.7 357 58.3
Nitab4.5_0002275g0100 Nicotiana tabacum HOM05D006050 ORTHO05D007457 8.6e-92 340.9 357 57.1
Peaxi162Scf00170g00718 Petunia axillaris HOM05D006050 ORTHO05D007457 9.6e-75 284.3 329 55.3
Cc09_g09460 Coffea canephora HOM05D006050 ORTHO05D007457 1.0e-52 211.1 268 46.6
PGSC0003DMG402021159 Solanum tuberosum HOM05D006050 ORTHO05D007457 2.0e-48 196.8 106 98.1
SalBow8G2368 Salvia bowleyana HOM05D006050 ORTHO05D007457 5.9e-48 195.3 280 42.1
Rhsim13G0194500 Rhododendron simsii HOM05D006050 ORTHO05D007457 2.2e-47 193.4 318 41.5
Oeu052380.1 Olea europaea HOM05D006050 ORTHO05D007457 9.3e-46 188.0 249 46.6
Migut.M00918 Erythranthe guttata HOM05D006050 ORTHO05D007457 4.3e-43 179.1 278 41.0
Lj2C306G12 Lonicera japonica HOM05D006050 ORTHO05D007457 2.8e-42 176.4 342 37.4
DCAR_003921 Daucus carota HOM05D006050 ORTHO05D007457 6.3e-42 175.3 289 39.1
Actinidia19520 Actinidia chinensis HOM05D006050 ORTHO05D007457 2.4e-41 173.3 273 41.8
HanXRQChr02g0047351 Helianthus annuus HOM05D006050 ORTHO05D007457 3.1e-41 172.9 313 39.0
Atru.chr10.1253 Acer truncatum HOM05D006050 ORTHO05D007457 6.9e-41 171.8 326 38.0
Lsat_1_v5_gn_1_97741 Lactuca sativa HOM05D006050 ORTHO05D007457 2.0e-40 170.2 283 39.2
SGA_v2.0_scaffold1G00164 Striga asiatica HOM05D006050 ORTHO05D007457 1.7e-39 167.2 242 42.6
Potri.011G080600 Populus trichocarpa HOM05D006050 ORTHO05D007457 1.1e-38 164.5 307 38.1
ECA248G2274 Erigeron canadensis HOM05D006050 ORTHO05D007457 3.2e-38 162.9 244 43.0
Manes.17G069500 Manihot esculenta HOM05D006050 ORTHO05D007457 2.1e-37 160.2 304 36.8
SGA_v2.0_scaffold333G48995 Striga asiatica HOM05D001706 ORTHO05D007457 6.1e-37 158.7 280 38.9
GSVIVG01021436001 Vitis vinifera HOM05D006050 ORTHO05D007457 6.1e-37 158.7 297 36.4
Thecc.06G151800 Theobroma cacao HOM05D006050 ORTHO05D007457 1.0e-36 157.9 258 40.7
QL05p058532 Quercus lobata HOM05D006050 ORTHO05D007457 1.8e-36 157.1 303 38.3
Nn3g20737 Nelumbo nucifera HOM05D006050 ORTHO05D007457 2.3e-36 156.8 320 38.8
MBI10_g02215_MAGBIO Magnolia biondii HOM05D006050 ORTHO05D007457 8.8e-36 154.8 279 38.7
PGR083G2192 Punica granatum HOM05D006050 ORTHO05D007457 1.1e-35 154.5 308 36.0
Sabra11G0069700 Salix brachista HOM05D006050 ORTHO05D007457 1.1e-35 154.5 286 36.7
TAR627G0203 Trochodendron aralioides HOM05D006050 ORTHO05D007457 2.0e-35 153.7 325 36.6
COL.COLO4_31087 Corchorus olitorius HOM05D006050 ORTHO05D007457 2.5e-35 153.3 354 34.2
Duzib192G0778 Durio zibethinus HOM05D006050 ORTHO05D007457 2.5e-35 153.3 262 39.7
Dinv30732 Davidia involucrata HOM05D006050 ORTHO05D007457 4.3e-35 152.5 214 44.9
Sabra11G0067500 Salix brachista HOM05D006050 ORTHO05D007457 1.3e-34 151.0 281 35.6
MD05G1284800 Malus domestica HOM05D006050 ORTHO05D007457 1.7e-34 150.6 328 35.4
FAN21G0460 Fragaria x ananassa HOM05D006050 ORTHO05D007457 2.2e-34 150.2 225 42.7
FAN25G0090 Fragaria x ananassa HOM05D006050 ORTHO05D007457 4.8e-34 149.1 225 42.7
Aqoxy4G00089 Aquilegia oxysepala HOM05D006050 ORTHO05D007457 6.3e-34 148.7 311 35.4
AUR62027517 Chenopodium quinoa HOM05D006050 ORTHO05D007457 6.3e-34 148.7 273 35.5
MD10G1263200 Malus domestica HOM05D006050 ORTHO05D007457 8.2e-34 148.3 325 36.0
Sc05g0006350 Simmondsia chinensis HOM05D006050 ORTHO05D007457 8.2e-34 148.3 293 34.1
Ciclev10017950m.g Citrus clementina HOM05D006050 ORTHO05D007457 1.1e-33 147.9 248 39.9
CiPaw.09G124900 Carya illinoinensis HOM05D006050 ORTHO05D007457 1.4e-33 147.5 325 35.1
Hma1.2p1_0286F.1_g114100 Hydrangea macrophylla HOM05D006050 ORTHO05D007457 3.1e-33 146.4 225 42.7
Glyma.13G217500 Glycine max HOM05D006050 ORTHO05D007457 5.3e-33 145.6 267 37.5
RcHm_v2.0_Chr5g0013951 Rosa chinensis HOM05D006050 ORTHO05D007457 5.3e-33 145.6 257 39.7
EL10Ac8g19724 Beta vulgaris HOM05D006050 ORTHO05D007457 2.6e-32 143.3 266 34.6
Sed0022060 Sechium edule HOM05D006050 ORTHO05D007457 3.4e-32 142.9 276 34.4
ClCG03G007090 Citrullus lanatus HOM05D006050 ORTHO05D007457 4.5e-32 142.5 279 34.8
Lalb_Chr18g0055521 Lupinus albus HOM05D006050 ORTHO05D007457 1.3e-31 141.0 289 33.9
vmacro04186 Vaccinium macrocarpon HOM05D006050 ORTHO05D007457 2.2e-31 140.2 101 68.3
FvH4_3g05720 Fragaria vesca HOM05D006050 ORTHO05D007457 2.9e-31 139.8 272 37.5
Prupe.4G079600 Prunus persica HOM05D006050 ORTHO05D007457 5.0e-31 139.0 283 34.6
Gorai.009G155500 Gossypium raimondii HOM05D006050 ORTHO05D007457 2.5e-30 136.7 253 37.9
Gohir.A05G149000 Gossypium hirsutum HOM05D006050 ORTHO05D007457 4.2e-30 136.0 253 37.5
Gohir.D05G151500 Gossypium hirsutum HOM05D006050 ORTHO05D007457 9.4e-30 134.8 253 37.5
TWI73G0574 Tripterygium wilfordii HOM05D006050 ORTHO05D007457 9.4e-30 134.8 251 36.7
Glyma.15G094900 Glycine max HOM05D006050 ORTHO05D007457 1.2e-29 134.4 260 34.6
CsaV3_1G032660 Cucumis sativus L. HOM05D006050 ORTHO05D007457 1.6e-29 134.0 284 34.5
Eucgr.D00300 Eucalyptus grandis HOM05D006050 ORTHO05D007457 1.6e-29 134.0 273 33.3
MELO3C002716.2 Cucumis melo HOM05D006050 ORTHO05D007457 2.7e-29 133.3 283 35.0
VMungo0540G2452 Vigna mungo HOM05D006050 ORTHO05D007457 3.9e-28 129.4 256 34.0
Lj6g0009694 Lotus japonicus HOM05D006050 ORTHO05D007457 8.8e-28 128.3 276 31.5
FvH4_3g05710 Fragaria vesca HOM05D006050 ORTHO05D007457 2.6e-27 126.7 102 62.7
Phvul.006G163900 Phaseolus vulgaris HOM05D006050 ORTHO05D007457 3.3e-27 126.3 254 32.7
PSO170G3783 Papaver somniferum HOM05D006050 ORTHO05D007457 7.4e-27 125.2 102 63.7
PSO017G0250 Papaver somniferum HOM05D006050 ORTHO05D007457 9.7e-27 124.8 102 64.7
Ah.09g232650 Amaranthus hybridus HOM05D006050 ORTHO05D007457 3.7e-26 122.9 298 31.2
Medtr2g019630 Medicago truncatula HOM05D006050 ORTHO05D007457 3.7e-26 122.9 332 32.2
TPR.G28613 Trifolium pratense HOM05D006050 ORTHO05D007457 4.8e-26 122.5 260 33.5
Cpa.g.sc166.17 Carica papaya HOM05D006050 ORTHO05D007457 8.2e-26 121.7 102 64.7
Psat1g190800 Pisum sativum HOM05D006050 ORTHO05D007457 1.4e-25 120.9 277 32.9
AUR62030211 Chenopodium quinoa HOM05D006050 ORTHO05D007457 1.2e-24 117.9 256 32.0
Thhalv10025036m.g Eutrema salsugineum HOM05D006050 ORTHO05D007457 1.2e-24 117.9 257 33.5
ATR0044G011 Amborella trichopoda HOM05D006050 ORTHO05D007457 1.6e-24 117.5 260 35.0
Ca_00551_v3 Cicer arietinum L. HOM05D006050 ORTHO05D007457 1.6e-24 117.5 276 31.5
Aa31LG6G960 Aethionema arabicum HOM05D006050 ORTHO05D007457 2.0e-24 117.1 276 36.2
Sp7g15790 Schrenkiella parvula HOM05D006050 ORTHO05D007457 2.0e-24 117.1 269 34.2
THA.LOC104812850 Tarenaya hassleriana HOM05D006050 ORTHO05D007457 7.7e-24 115.2 256 33.2
AL7G36120 Arabidopsis lyrata HOM05D006050 ORTHO05D007457 2.9e-23 113.2 255 34.5
AT4G18270 Arabidopsis thaliana HOM05D006050 ORTHO05D007457 7.2e-22 108.6 239 33.9
Duzib235G1544 Durio zibethinus HOM05D006050 ORTHO05D007457 2.1e-21 107.1 288 33.3
A03p51180 Brassica napus HOM05D006050 ORTHO05D007457 3.6e-21 106.3 225 37.3
BraA03t14200Z Brassica rapa HOM05D006050 ORTHO05D007457 3.6e-21 106.3 225 37.3
Carub.0007s2300 Capsella rubella HOM05D006050 ORTHO05D007457 4.7e-21 105.9 240 33.3
unitig_32.g11518 Utricularia gibba HOM05D006050 ORTHO05D007457 4.7e-21 105.9 223 35.0
AagrBONN_evm.TU.Sc2ySwM_228.2617 Anthoceros agrestis HOM05D006050 ORTHO05D007457 8.0e-21 105.1 106 51.9
SMO239G0146 Selaginella moellendorffii HOM05D006050 ORTHO05D007457 1.0e-20 104.8 102 53.9
C07p49580 Brassica napus HOM05D006050 ORTHO05D007457 4.0e-20 102.8 224 36.6
BolC7t45462H Brassica oleracea HOM05D006050 ORTHO05D007457 4.0e-20 102.8 224 36.6
Pp3c6_19460 Physcomitrium patens HOM05D006050 ORTHO05D007457 5.2e-20 102.4 108 50.0
Gorai.011G043000 Gossypium raimondii HOM05D006050 ORTHO05D007457 2.0e-19 100.5 113 47.8
Mapoly0001s0010 Marchantia polymorpha HOM05D006050 ORTHO05D007457 2.6e-19 100.1 102 52.0
DCAR_029765 Daucus carota HOM05D006050 ORTHO05D007457 3.3e-19 99.8 86 64.0
Gohir.D10G040800 Gossypium hirsutum HOM05D006050 ORTHO05D007457 3.3e-19 99.8 117 47.0
Gohir.A10G040000 Gossypium hirsutum HOM05D006050 ORTHO05D007457 4.4e-19 99.4 117 47.0
PGSC0003DMG403021159 Solanum tuberosum HOM05D006050 ORTHO05D007457 5.7e-19 99.0 57 87.7
HPP92_021321 Vanilla planifolia HOM05D006050 ORTHO05D007457 7.5e-19 98.6 120 45.0
Haze_05583 Corylus avellana HOM05D006050 ORTHO05D007457 9.7e-19 98.2 86 61.6
DCAR_011844 Daucus carota HOM05D006050 ORTHO05D007457 1.7e-18 97.4 82 65.9
Mapoly0042s0029 Marchantia polymorpha HOM05D006050 ORTHO05D007457 3.1e-17 93.2 103 49.5
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 3.1e-17 93.2 209 31.6
CARHR225070 Cardamine hirsuta HOM05D006050 ORTHO05D007457 4.5e-16 89.4 249 30.1
arahy.Tifrunner.gnm1.ann1.49YCVY Arachis hypogaea HOM05D006050 ORTHO05D007457 1.0e-15 88.2 92 48.9
arahy.Tifrunner.gnm1.ann1.9VA34X Arachis hypogaea HOM05D006050 ORTHO05D007457 1.0e-15 88.2 92 48.9
Zm00001eb120180 Zea mays HOM05D006050 ORTHO05D007457 1.0e-15 88.2 272 28.3
FAN11G0378 Fragaria x ananassa HOM05D006050 ORTHO05D007457 1.3e-15 87.8 73 63.0
SEGI_21633 Sequoiadendron giganteum HOM05D006050 ORTHO05D007457 2.9e-15 86.7 94 48.9
unitig_32.g11513 Utricularia gibba HOM05D057528 ORTHO05D030710 2.7e-13 80.1 77 53.2
CSS0038270 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 4.7e-13 79.3 84 46.4
CBR_g3965 Chara braunii HOM05D006050 ORTHO05D007457 6.1e-13 79.0 100 42.0
vmacro04187 Vaccinium macrocarpon HOM05D006050 ORTHO05D030710 4.0e-12 76.3 155 37.4
HPP92_008747 Vanilla planifolia HOM05D006050 ORTHO05D007457 6.8e-12 75.5 101 41.6
Cpa.g.sc166.16 Carica papaya HOM05D006050 ORTHO05D007457 1.6e-08 64.3 131 38.2
PRCOL_00000982 Prasinoderma coloniale HOM05D006050 ORTHO05D007457 7.7e-08 62.0 93 40.9


User provided reference genes

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