Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g019560 Solanum pennellii HOM05D007598 ORTHO05D009632 4.5e-36 154.1 78 100.0
Solyc02g070470.1 Solanum lycopersicum HOM05D007598 ORTHO05D009632 8.5e-35 149.8 78 97.4
PGSC0003DMG400021093 Solanum tuberosum HOM05D007598 ORTHO05D009632 6.3e-30 133.7 78 88.5
CAN.G702.32 Capsicum annuum HOM05D007598 ORTHO05D009632 1.6e-25 119.0 78 78.2
Nitab4.5_0000420g0040 Nicotiana tabacum HOM05D007598 ORTHO05D009632 4.9e-22 107.5 78 69.2
Aa31LG10G6810 Aethionema arabicum HOM05D007598 ORTHO05D009632 4.1e-21 104.4 85 64.7
Cc00_g10360 Coffea canephora HOM05D007598 ORTHO05D009632 5.4e-21 104.0 79 69.6
Nitab4.5_0002744g0030 Nicotiana tabacum HOM05D007598 ORTHO05D009632 2.0e-20 102.1 78 71.8
Dinv32243 Davidia involucrata HOM05D007598 ORTHO05D009632 2.7e-20 101.7 76 67.1
Thhalv10017600m.g Eutrema salsugineum HOM05D007598 ORTHO05D009632 2.7e-20 101.7 83 68.7
THA.LOC104820651 Tarenaya hassleriana HOM05D007598 ORTHO05D009632 2.7e-20 101.7 88 63.6
BcaB06g28784 Brassica carinata HOM05D007598 ORTHO05D009632 1.0e-19 99.8 85 64.7
Psat1g188680 Pisum sativum HOM05D007598 ORTHO05D009632 1.0e-19 99.8 77 62.3
A04p26490 Brassica napus HOM05D007598 ORTHO05D009632 1.3e-19 99.4 86 64.0
C04p63910 Brassica napus HOM05D007598 ORTHO05D009632 1.3e-19 99.4 86 64.0
BolC4t27858H Brassica oleracea HOM05D007598 ORTHO05D009632 1.3e-19 99.4 86 64.0
BraA04t18153Z Brassica rapa HOM05D007598 ORTHO05D009632 1.3e-19 99.4 86 64.0
CSS0006536 Camellia sinensis var. sinensis HOM05D007598 ORTHO05D009632 1.7e-19 99.0 74 67.6
Carub.0004s1626 Capsella rubella HOM05D007598 ORTHO05D009632 2.9e-19 98.2 86 62.8
Nitab4.5_0006887g0010 Nicotiana tabacum HOM05D007598 ORTHO05D009632 3.8e-19 97.8 71 69.0
Rhsim02G0159000 Rhododendron simsii HOM05D007598 ORTHO05D009632 3.8e-19 97.8 86 59.3
AT2G34585 Arabidopsis thaliana HOM05D007598 ORTHO05D009632 5.0e-19 97.4 84 63.1
CARHR128680 Cardamine hirsuta HOM05D007598 ORTHO05D009632 5.0e-19 97.4 84 58.3
ClCG01G024670 Citrullus lanatus HOM05D007598 ORTHO05D009632 5.0e-19 97.4 86 61.6
Migut.M00903 Erythranthe guttata HOM05D007598 ORTHO05D009632 5.0e-19 97.4 78 66.7
Sp4g16850 Schrenkiella parvula HOM05D007598 ORTHO05D009632 5.0e-19 97.4 85 63.5
arahy.Tifrunner.gnm1.ann1.A3G0A3 Arachis hypogaea HOM05D007598 ORTHO05D009632 6.6e-19 97.1 81 64.2
MELO3C007128.2 Cucumis melo HOM05D007598 ORTHO05D009632 6.6e-19 97.1 83 63.9
Migut.M01992 Erythranthe guttata HOM05D007598 ORTHO05D009632 8.6e-19 96.7 78 66.7
AL4G30560 Arabidopsis lyrata HOM05D007598 ORTHO05D009632 1.1e-18 96.3 84 63.1
arahy.Tifrunner.gnm1.ann1.KTXA2U Arachis hypogaea HOM05D007598 ORTHO05D009632 1.1e-18 96.3 81 64.2
CSS0035986 Camellia sinensis var. sinensis HOM05D007598 ORTHO05D009632 1.5e-18 95.9 73 67.1
Lalb_Chr20g0117881 Lupinus albus HOM05D007598 ORTHO05D009632 1.5e-18 95.9 75 62.7
Cpa.g.sc170.27 Carica papaya HOM05D007598 ORTHO05D009632 1.9e-18 95.5 86 61.6
AUR62030196 Chenopodium quinoa HOM05D007598 ORTHO05D009632 4.2e-18 94.4 81 63.0
CsaV3_6G051780 Cucumis sativus L. HOM05D007598 ORTHO05D009632 4.2e-18 94.4 83 60.2
CiPaw.10G091200 Carya illinoinensis HOM05D007598 ORTHO05D009632 5.5e-18 94.0 89 57.3
AUR62002748 Chenopodium quinoa HOM05D007598 ORTHO05D009632 5.5e-18 94.0 78 62.8
FAN25G0892 Fragaria x ananassa HOM05D007598 ORTHO05D009632 7.2e-18 93.6 58 75.9
Actinidia07703 Actinidia chinensis HOM05D007598 ORTHO05D009632 9.5e-18 93.2 75 64.0
CANSAT35G0825 Cannabis sativa HOM05D007598 ORTHO05D009632 9.5e-18 93.2 92 56.5
PGR042G1521 Punica granatum HOM05D007598 ORTHO05D009632 9.5e-18 93.2 82 61.0
Thecc.06G149600 Theobroma cacao HOM05D007598 ORTHO05D009632 9.5e-18 93.2 82 59.8
Sed0007826 Sechium edule HOM05D007598 ORTHO05D009632 1.2e-17 92.8 82 63.4
Actinidia39580 Actinidia chinensis HOM05D007598 ORTHO05D009632 1.6e-17 92.4 74 63.5
Manes.17G070801 Manihot esculenta HOM05D007598 ORTHO05D009632 1.6e-17 92.4 92 58.7
EL10Ac8g19673 Beta vulgaris HOM05D007598 ORTHO05D009632 2.1e-17 92.0 68 64.7
DCAR_027909 Daucus carota HOM05D007598 ORTHO05D009632 2.1e-17 92.0 73 63.0
HanXRQChr15g0480881 Helianthus annuus HOM05D007598 ORTHO05D009632 2.1e-17 92.0 79 68.4
FAN11G3574 Fragaria x ananassa HOM05D007598 ORTHO05D009632 3.6e-17 91.3 81 63.0
FAN16G2639 Fragaria x ananassa HOM05D007598 ORTHO05D009632 3.6e-17 91.3 56 80.4
FAN21G2813 Fragaria x ananassa HOM05D007598 ORTHO05D009632 3.6e-17 91.3 56 80.4
Prupe.4G081500 Prunus persica HOM05D007598 ORTHO05D009632 3.6e-17 91.3 89 59.6
FvH4_3g05470 Fragaria vesca HOM05D007598 ORTHO05D009632 4.7e-17 90.9 82 58.5
Glyma.15G093500 Glycine max HOM05D007598 ORTHO05D009632 6.1e-17 90.5 78 60.3
Nn3g20182 Nelumbo nucifera HOM05D007598 ORTHO05D009632 6.1e-17 90.5 88 56.8
Ca_00537_v3 Cicer arietinum L. HOM05D007598 ORTHO05D009632 1.0e-16 89.7 78 62.8
Atru.chr10.1775 Acer truncatum HOM05D007598 ORTHO05D009632 1.4e-16 89.4 76 63.2
Ah.14g086510 Amaranthus hybridus HOM05D007598 ORTHO05D009632 1.8e-16 89.0 72 62.5
Medtr2g019240 Medicago truncatula HOM05D007598 ORTHO05D009632 1.8e-16 89.0 59 71.2
Phvul.006G165400 Phaseolus vulgaris HOM05D007598 ORTHO05D009632 2.3e-16 88.6 80 60.0
Glyma.13G218700 Glycine max HOM05D007598 ORTHO05D009632 3.0e-16 88.2 78 64.1
Gohir.D10G042400 Gossypium hirsutum HOM05D007598 ORTHO05D009632 3.0e-16 88.2 66 65.2
PGSC0003DMG400012092 Solanum tuberosum HOM05D007598 ORTHO05D009632 3.0e-16 88.2 49 83.7
HanXRQChr04g0114301 Helianthus annuus HOM05D007598 ORTHO05D009632 4.0e-16 87.8 83 61.4
QL05p057697 Quercus lobata HOM05D007598 ORTHO05D009632 4.0e-16 87.8 76 64.5
Lj6g0001552 Lotus japonicus HOM05D007598 ORTHO05D009632 5.2e-16 87.4 80 63.8
MD05G1283100 Malus domestica HOM05D007598 ORTHO05D009632 5.2e-16 87.4 83 59.0
Potri.011G084300 Populus trichocarpa HOM05D007598 ORTHO05D009632 5.2e-16 87.4 56 76.8
RcHm_v2.0_Chr5g0014281 Rosa chinensis HOM05D007598 ORTHO05D009632 6.8e-16 87.0 86 58.1
Sabra11G0066800 Salix brachista HOM05D007598 ORTHO05D009632 6.8e-16 87.0 89 56.2
SalBow8G5536 Salvia bowleyana HOM05D007598 ORTHO05D009632 6.8e-16 87.0 71 66.2
PSO541G2526 Papaver somniferum HOM05D007598 ORTHO05D009632 8.9e-16 86.7 90 56.7
unitig_749.g13736 Utricularia gibba HOM05D007598 ORTHO05D009632 8.9e-16 86.7 71 63.4
Duzib235G0096 Durio zibethinus HOM05D007598 ORTHO05D009632 1.2e-15 86.3 87 57.5
Cfa000936 Carpinus fangiana HOM05D007598 ORTHO05D009632 2.0e-15 85.5 88 58.0
Aqoxy7G00246 Aquilegia oxysepala HOM05D007598 ORTHO05D009632 2.6e-15 85.1 68 63.2
Sc05g0006160 Simmondsia chinensis HOM05D007598 ORTHO05D009632 2.6e-15 85.1 77 58.4
Ciclev10017916m.g Citrus clementina HOM05D007598 ORTHO05D009632 3.4e-15 84.7 78 60.3
Lsat_1_v5_gn_7_28481 Lactuca sativa HOM05D007598 ORTHO05D009632 4.4e-15 84.3 78 62.8
Rhsim13G0114100 Rhododendron simsii HOM05D007598 ORTHO05D009632 4.4e-15 84.3 77 59.7
TAR626G0451 Trochodendron aralioides HOM05D007598 ORTHO05D009632 4.4e-15 84.3 61 67.2
MD10G1261400 Malus domestica HOM05D007598 ORTHO05D009632 9.8e-15 83.2 78 59.0
COL.COLO4_31062 Corchorus olitorius HOM05D007598 ORTHO05D009632 1.7e-14 82.4 46 78.3
ECA236G0778 Erigeron canadensis HOM05D007598 ORTHO05D009632 1.7e-14 82.4 46 78.3
HPP92_000988 Vanilla planifolia HOM05D007598 ORTHO05D009632 1.7e-14 82.4 78 57.7
MBI02_g15148_MAGBIO Magnolia biondii HOM05D007598 ORTHO05D009632 2.2e-14 82.0 57 71.9
TWI53G0871 Tripterygium wilfordii HOM05D007598 ORTHO05D009632 2.2e-14 82.0 85 56.5
ATR1098G093 Amborella trichopoda HOM05D007598 ORTHO05D009632 5.4e-13 77.4 76 56.6
Os07g0154300 Oryza sativa ssp. japonica HOM05D007598 ORTHO05D009632 1.2e-12 76.3 74 55.4
SEGI_36626 Sequoiadendron giganteum HOM05D007598 ORTHO05D009632 1.2e-12 76.3 60 61.7
Zm00001eb117510 Zea mays HOM05D007598 ORTHO05D009632 4.6e-12 74.3 71 56.3
Mapoly0055s0099 Marchantia polymorpha HOM05D007598 ORTHO05D009632 4.3e-10 67.8 49 61.2
Pp3c14_11250 Physcomitrium patens HOM05D007598 ORTHO05D009632 3.4e-07 58.2 68 41.2
SEGI_00564 Sequoiadendron giganteum HOM05D007598 ORTHO05D009632 3.4e-07 58.2 55 47.3
Aqoxy6G00608 Aquilegia oxysepala HOM05D007833 ORTHO05D009855 1.3e-06 56.2 76 38.2
Actinidia16706 Actinidia chinensis HOM05D000667 ORTHO05D004096 3.7e-06 54.7 60 48.3


User provided reference genes

Program Settings