Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g019050 Solanum pennellii HOM05D005932 ORTHO05D006213 9.1e-84 313.5 160 100.0
PGSC0003DMG400021122 Solanum tuberosum HOM05D005932 ORTHO05D006213 3.7e-69 265.0 162 85.2
Solyc02g069910.2 Solanum lycopersicum HOM05D005932 ORTHO05D006213 7.1e-52 207.6 107 96.3
Nitab4.5_0004615g0090 Nicotiana tabacum HOM05D005932 ORTHO05D006213 3.4e-38 162.2 138 64.5
Nitab4.5_0005178g0030 Nicotiana tabacum HOM05D005932 ORTHO05D006213 6.4e-21 104.8 154 46.1
Nitab4.5_0004734g0050 Nicotiana tabacum HOM05D005932 ORTHO05D006213 7.9e-19 97.8 156 42.9
Solyc02g024010.1 Solanum lycopersicum HOM05D005932 ORTHO05D006213 1.8e-18 96.7 151 45.0
PGSC0003DMG400011812 Solanum tuberosum HOM05D005932 ORTHO05D006213 2.3e-18 96.3 147 44.2
Sopen02g006750 Solanum pennellii HOM05D005932 ORTHO05D006213 5.6e-17 91.7 151 44.4
Peaxi162Scf00395g00004 Petunia axillaris HOM05D005932 ORTHO05D006213 1.1e-15 87.4 161 42.2
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 1.9e-12 76.6 123 39.8
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 2.5e-12 76.3 125 37.6
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 9.3e-12 74.3 128 39.8
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 1.2e-11 73.9 137 36.5
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 1.2e-11 73.9 148 35.8
SalBow8G0055 Salvia bowleyana HOM05D005932 ORTHO05D006213 1.8e-10 70.1 149 39.6
MSTRG.16291 Avicennia marina HOM05D005932 ORTHO05D006213 3.0e-10 69.3 130 39.2
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 3.0e-10 69.3 136 38.2
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 5.1e-10 68.6 123 38.2
unitig_37.g12073 Utricularia gibba HOM05D005932 ORTHO05D006213 5.1e-10 68.6 144 40.3
CiPaw.10G109100 Carya illinoinensis HOM05D005932 ORTHO05D006213 6.7e-10 68.2 137 34.3
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 1.5e-09 67.0 132 37.9
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 1.9e-09 66.6 153 35.3
Lj1P1161T30 Lonicera japonica HOM05D005932 ORTHO05D006213 1.9e-09 66.6 112 41.1
Lsat_1_v5_gn_2_93200 Lactuca sativa HOM05D005932 ORTHO05D006213 4.3e-09 65.5 111 41.4
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 5.7e-09 65.1 130 42.3
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 7.4e-09 64.7 130 43.1
Lj2P330T27 Lonicera japonica HOM05D005932 ORTHO05D006213 7.4e-09 64.7 137 34.3
Actinidia31387 Actinidia chinensis HOM05D005932 ORTHO05D006213 1.3e-08 63.9 133 31.6
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 1.3e-08 63.9 130 42.3
RcHm_v2.0_Chr5g0016051 Rosa chinensis HOM05D005932 ORTHO05D006213 1.3e-08 63.9 131 34.4
CsaV3_1G037320 Cucumis sativus L. HOM05D005932 ORTHO05D006213 4.8e-08 62.0 113 37.2
DCAR_003852 Daucus carota HOM05D005932 ORTHO05D006213 4.8e-08 62.0 127 37.0
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 4.8e-08 62.0 140 34.3
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 1.1e-07 60.8 135 34.1
unitig_92.g28172 Utricularia gibba HOM05D005932 ORTHO05D006213 1.1e-07 60.8 147 38.8
FAN21G2441 Fragaria x ananassa HOM05D005932 ORTHO05D006213 1.4e-07 60.5 132 36.4
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 1.4e-07 60.5 134 36.6
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 1.8e-07 60.1 135 35.6
FAN11G2171 Fragaria x ananassa HOM05D005932 ORTHO05D006213 2.4e-07 59.7 135 36.3
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 2.4e-07 59.7 131 37.4
SGA_v2.0_scaffold223G42865 Striga asiatica HOM05D005932 ORTHO05D006213 2.4e-07 59.7 134 35.8
Migut.M01897 Erythranthe guttata HOM05D005932 ORTHO05D006213 3.1e-07 59.3 130 33.8
Nn3g20198 Nelumbo nucifera HOM05D005932 ORTHO05D006213 3.1e-07 59.3 139 33.1
FvH4_3g10110 Fragaria vesca HOM05D005932 ORTHO05D006213 4.1e-07 58.9 141 35.5
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 4.1e-07 58.9 135 35.6
Rhsim02G0161400 Rhododendron simsii HOM05D005932 ORTHO05D006213 4.1e-07 58.9 130 33.1
Dinv04757 Davidia involucrata HOM05D005932 ORTHO05D006213 9.0e-07 57.8 113 34.5
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 9.0e-07 57.8 131 36.6
Duzib192G0542 Durio zibethinus HOM05D005932 ORTHO05D006213 1.5e-06 57.0 117 34.2
MD10G1253000 Malus domestica HOM05D005932 ORTHO05D006213 1.5e-06 57.0 133 33.8
Sabra11G0088800 Salix brachista HOM05D005932 ORTHO05D006213 1.5e-06 57.0 120 35.0
Actinidia32363 Actinidia chinensis HOM05D005932 ORTHO05D006213 2.0e-06 56.6 119 35.3
MBI18_g11291_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 2.6e-06 56.2 133 35.3
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 3.4e-06 55.8 131 35.9
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 3.4e-06 55.8 135 33.3
SGA_v2.0_scaffold1G00270 Striga asiatica HOM05D005932 ORTHO05D006213 5.9e-06 55.1 144 36.1
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 7.7e-06 54.7 129 34.1


User provided reference genes

Program Settings