Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g018170 Solanum pennellii HOM05D006750 ORTHO05D008426 1.4e-34 149.1 74 100.0
Solyc02g069070.3 Solanum lycopersicum HOM05D006750 ORTHO05D008426 2.0e-33 145.2 74 98.6
CAN.G1222.19 Capsicum annuum HOM05D006750 ORTHO05D008426 6.0e-30 133.7 70 94.3
Nitab4.5_0003773g0080 Nicotiana tabacum HOM05D006750 ORTHO05D008426 6.0e-30 133.7 74 90.5
Nitab4.5_0002056g0050 Nicotiana tabacum HOM05D006750 ORTHO05D008426 7.8e-30 133.3 74 89.2
Peaxi162Scf00149g00921 Petunia axillaris HOM05D006750 ORTHO05D008426 3.3e-28 127.9 72 87.5
Cc09_g06280 Coffea canephora HOM05D006750 ORTHO05D008426 3.9e-21 104.4 63 73.0
CSS0027015 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 2.6e-17 91.7 70 62.9
Actinidia22388 Actinidia chinensis HOM05D006750 ORTHO05D008426 4.5e-17 90.9 70 62.9
TWI63G0081 Tripterygium wilfordii HOM05D006750 ORTHO05D008426 1.3e-16 89.4 69 60.9
vmacro03507 Vaccinium macrocarpon HOM05D006750 ORTHO05D008426 2.9e-16 88.2 69 65.2
QL11p018076 Quercus lobata HOM05D006750 ORTHO05D008426 8.4e-16 86.7 67 62.7
AT2G39440 Arabidopsis thaliana HOM05D006750 ORTHO05D008426 1.1e-15 86.3 64 62.5
ECA246G4127 Erigeron canadensis HOM05D006750 ORTHO05D008426 1.1e-15 86.3 59 66.1
RhsimUnG0232200 Rhododendron simsii HOM05D006750 ORTHO05D008426 1.1e-15 86.3 69 63.8
Atru.chr12.2220 Acer truncatum HOM05D006750 ORTHO05D008426 1.4e-15 85.9 59 62.7
CARHR134300 Cardamine hirsuta HOM05D006750 ORTHO05D008426 1.4e-15 85.9 64 59.4
Sabra15G0136900 Salix brachista HOM05D006750 ORTHO05D008426 1.9e-15 85.5 67 61.2
AL4G36810 Arabidopsis lyrata HOM05D006750 ORTHO05D008426 3.2e-15 84.7 62 62.9
Manes.11G104340 Manihot esculenta HOM05D006750 ORTHO05D008426 3.2e-15 84.7 59 61.0
TAR627G0115 Trochodendron aralioides HOM05D006750 ORTHO05D008426 7.1e-15 83.6 60 70.0
MSTRG.22268 Avicennia marina HOM05D006750 ORTHO05D008426 1.2e-14 82.8 66 51.5
Carub.0004s2150 Capsella rubella HOM05D006750 ORTHO05D008426 1.2e-14 82.8 64 57.8
BraA05t19661Z Brassica rapa HOM05D006750 ORTHO05D008426 1.6e-14 82.4 64 57.8
Thhalv10017350m.g Eutrema salsugineum HOM05D006750 ORTHO05D008426 1.6e-14 82.4 64 59.4
SalBow8G0594 Salvia bowleyana HOM05D006750 ORTHO05D008426 1.6e-14 82.4 60 60.0
SalBow8G2736 Salvia bowleyana HOM05D006750 ORTHO05D008426 1.6e-14 82.4 60 60.0
BolC4t22432H Brassica oleracea HOM05D006750 ORTHO05D008426 2.1e-14 82.0 64 57.8
Ciclev10016972m.g Citrus clementina HOM05D006750 ORTHO05D008426 2.1e-14 82.0 59 57.6
HanXRQChr07g0189661 Helianthus annuus HOM05D006750 ORTHO05D008426 2.1e-14 82.0 65 60.0
ATR0763G132 Amborella trichopoda HOM05D006750 ORTHO05D008426 2.7e-14 81.6 69 50.7
BcaC02g11618 Brassica carinata HOM05D006750 ORTHO05D008426 4.6e-14 80.9 64 56.2
C04p13120 Brassica napus HOM05D006750 ORTHO05D008426 4.6e-14 80.9 64 56.2
COL.COLO4_30981 Corchorus olitorius HOM05D006750 ORTHO05D008426 4.6e-14 80.9 58 62.1
Migut.M01971 Erythranthe guttata HOM05D006750 ORTHO05D008426 6.0e-14 80.5 67 53.7
A05p06970 Brassica napus HOM05D006750 ORTHO05D008426 7.9e-14 80.1 64 56.2
Thecc.06G141200 Theobroma cacao HOM05D006750 ORTHO05D008426 7.9e-14 80.1 62 61.3
FvH4_3g12150 Fragaria vesca HOM05D006750 ORTHO05D008426 1.0e-13 79.7 67 53.7
FAN16G3293 Fragaria x ananassa HOM05D006750 ORTHO05D008426 1.0e-13 79.7 67 53.7
Nn7g38126 Nelumbo nucifera HOM05D006750 ORTHO05D008426 1.0e-13 79.7 68 55.9
Potri.012G120220 Populus trichocarpa HOM05D006750 ORTHO05D008426 1.0e-13 79.7 62 59.7
Sp4g21740 Schrenkiella parvula HOM05D006750 ORTHO05D008426 1.0e-13 79.7 64 56.2
Prupe.4G110300 Prunus persica HOM05D006750 ORTHO05D008426 1.3e-13 79.3 62 54.8
Thecc.06G140200 Theobroma cacao HOM05D006750 ORTHO05D008426 1.3e-13 79.3 62 61.3
BcaC02g12068 Brassica carinata HOM05D006750 ORTHO05D008426 1.8e-13 79.0 64 56.2
CANSAT21G0613 Cannabis sativa HOM05D006750 ORTHO05D008426 1.8e-13 79.0 69 56.5
Aa31LG5G20440 Aethionema arabicum HOM05D004294 ORTHO05D004899 2.3e-13 78.6 62 53.2
Potri.012G120100 Populus trichocarpa HOM05D006750 ORTHO05D008426 2.3e-13 78.6 62 58.1
RcHm_v2.0_Chr5g0019891 Rosa chinensis HOM05D006750 ORTHO05D008426 2.3e-13 78.6 67 55.2
C04p08300 Brassica napus HOM05D006750 ORTHO05D008426 3.0e-13 78.2 64 56.2
ClCG01G009300 Citrullus lanatus HOM05D006750 ORTHO05D008426 3.0e-13 78.2 56 60.7
CsaV3_1G046580 Cucumis sativus L. HOM05D006750 ORTHO05D008426 3.0e-13 78.2 65 58.5
MD05G1254400 Malus domestica HOM05D006750 ORTHO05D008426 3.0e-13 78.2 58 56.9
Sed0026407 Sechium edule HOM05D006750 ORTHO05D008426 3.0e-13 78.2 64 59.4
Cfa000723 Carpinus fangiana HOM05D006750 ORTHO05D008426 3.9e-13 77.8 59 59.3
CiPaw.10G065100 Carya illinoinensis HOM05D006750 ORTHO05D008426 3.9e-13 77.8 59 59.3
BcaB02g09122 Brassica carinata HOM05D006750 ORTHO05D008426 5.1e-13 77.4 52 59.6
Eucgr.D01041 Eucalyptus grandis HOM05D006750 ORTHO05D008426 5.1e-13 77.4 65 52.3
FAN25G1681 Fragaria x ananassa HOM05D006750 ORTHO05D008426 5.1e-13 77.4 67 52.2
Ca_21154_v3 Cicer arietinum L. HOM05D006750 ORTHO05D008426 6.7e-13 77.0 61 55.7
MELO3C021769.2 Cucumis melo HOM05D006750 ORTHO05D008426 6.7e-13 77.0 64 57.8
Lsat_1_v5_gn_5_36321 Lactuca sativa HOM05D006750 ORTHO05D008426 8.7e-13 76.6 66 57.6
PSO541G1844 Papaver somniferum HOM05D006750 ORTHO05D008426 8.7e-13 76.6 61 50.8
MD10G1234600 Malus domestica HOM05D006750 ORTHO05D008426 1.1e-12 76.3 65 55.4
PSO675G8070 Papaver somniferum HOM05D006750 ORTHO05D008426 1.1e-12 76.3 61 50.8
SGA_v2.0_scaffold298G47680 Striga asiatica HOM05D006750 ORTHO05D008426 1.5e-12 75.9 63 55.6
Lj4g0008374 Lotus japonicus HOM05D006750 ORTHO05D008426 1.9e-12 75.5 58 62.1
DCAR_004323 Daucus carota HOM05D006750 ORTHO05D008426 5.6e-12 73.9 54 64.8
Hma1.2p1_0040F.1_g025070 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 5.6e-12 73.9 45 71.1
Hma1.2p1_0040F.1_g025080 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 5.6e-12 73.9 45 71.1
unitig_748.g7497 Utricularia gibba HOM05D006750 ORTHO05D008426 5.6e-12 73.9 67 47.8
GSVIVG01012094001 Vitis vinifera HOM05D006750 ORTHO05D008426 5.6e-12 73.9 65 52.3
Phvul.003G153500 Phaseolus vulgaris HOM05D006750 ORTHO05D008426 9.6e-12 73.2 58 55.2
Glyma.02G206800 Glycine max HOM05D006750 ORTHO05D008426 1.6e-11 72.4 59 54.2
Gohir.A04G017000 Gossypium hirsutum HOM05D006750 ORTHO05D008426 1.6e-11 72.4 63 57.1
Gohir.D05G369200 Gossypium hirsutum HOM05D006750 ORTHO05D008426 1.6e-11 72.4 63 57.1
Aqoxy1G01469 Aquilegia oxysepala HOM05D006750 ORTHO05D008426 2.1e-11 72.0 58 56.9
AUR62007362 Chenopodium quinoa HOM05D006750 ORTHO05D008426 2.1e-11 72.0 54 59.3
TPR.G24866 Trifolium pratense HOM05D006750 ORTHO05D008426 2.8e-11 71.6 61 52.5
AUR62018626 Chenopodium quinoa HOM05D006750 ORTHO05D008426 4.8e-11 70.9 54 57.4
Gorai.009G437900 Gossypium raimondii HOM05D006750 ORTHO05D008426 4.8e-11 70.9 54 59.3
Sp4g08180 Schrenkiella parvula HOM05D006750 ORTHO05D008426 4.8e-11 70.9 64 50.0
Psat0s3953g0080 Pisum sativum HOM05D006750 ORTHO05D008426 6.2e-11 70.5 60 51.7
THA.LOC104824253 Tarenaya hassleriana HOM05D006750 ORTHO05D008426 8.1e-11 70.1 71 47.9
EL10Ac2g02809 Beta vulgaris HOM05D006750 ORTHO05D008426 1.1e-10 69.7 54 59.3
VMungo1215G0360 Vigna mungo HOM05D006750 ORTHO05D008426 1.1e-10 69.7 58 55.2
PGR142G2582 Punica granatum HOM05D006750 ORTHO05D008426 3.1e-10 68.2 59 49.2
HPP92_004186 Vanilla planifolia HOM05D006750 ORTHO05D008426 4.0e-10 67.8 62 48.4
Oeu052673.2 Olea europaea HOM05D006750 ORTHO05D008426 5.3e-10 67.4 47 61.7
Lalb_Chr02g0152091 Lupinus albus HOM05D006750 ORTHO05D008426 6.9e-10 67.0 66 47.0
Haze_06024 Corylus avellana HOM05D006750 ORTHO05D008426 9.0e-10 66.6 46 60.9
Haze_06026 Corylus avellana HOM05D006750 ORTHO05D008426 9.0e-10 66.6 46 60.9
Hund11169 Selenicereus undatus HOM05D006750 ORTHO05D008426 9.0e-10 66.6 74 44.6
arahy.Tifrunner.gnm1.ann1.8322W6 Arachis hypogaea HOM05D006750 ORTHO05D008426 2.0e-09 65.5 58 44.8
arahy.Tifrunner.gnm1.ann1.RPZE8L Arachis hypogaea HOM05D006750 ORTHO05D008426 2.0e-09 65.5 58 44.8
Dinv11873 Davidia involucrata HOM05D006750 ORTHO05D008426 2.0e-09 65.5 51 60.8
CSS0019703 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 3.4e-09 64.7 53 56.6
Lj1A1143T38 Lonicera japonica HOM05D006750 ORTHO05D008426 4.5e-09 64.3 53 58.5
Duzib235G0570 Durio zibethinus HOM05D006750 ORTHO05D008426 5.8e-09 63.9 47 61.7
Os02g0168900 Oryza sativa ssp. japonica HOM05D006750 ORTHO05D008426 1.7e-08 62.4 63 46.0
CDE06G2778 Ceratophyllum demersum HOM05D006750 ORTHO05D008426 2.2e-08 62.0 45 57.8
Ah.12g055560 Amaranthus hybridus HOM05D002269 ORTHO05D002421 1.4e-07 59.3 37 70.3
Zm00001eb233030 Zea mays HOM05D006750 ORTHO05D008426 1.2e-06 56.2 56 44.6
CBR_g39953 Chara braunii HOM05D006750 ORTHO05D008426 7.9e-06 53.5 60 40.0


User provided reference genes

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