Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g018030 Solanum pennellii HOM05D007226 ORTHO05D009160 2.9e-102 375.2 181 100.0
PGSC0003DMG400010353 Solanum tuberosum HOM05D007226 ORTHO05D009160 5.3e-96 354.4 180 95.0
Solyc02g068930.4 Solanum lycopersicum HOM05D007226 ORTHO05D009160 6.9e-96 354.0 181 95.6
CAN.G149.55 Capsicum annuum HOM05D007226 ORTHO05D009160 1.1e-80 303.5 185 83.8
Nitab4.5_0003773g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 1.3e-78 296.6 176 80.7
Nitab4.5_0001288g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 1.2e-71 273.5 208 69.2
Dinv05963 Davidia involucrata HOM05D007226 ORTHO05D009160 3.7e-65 251.9 178 69.1
HanXRQChr14g0447221 Helianthus annuus HOM05D007226 ORTHO05D009160 2.2e-62 242.7 180 67.8
Actinidia22392 Actinidia chinensis HOM05D007226 ORTHO05D009160 2.9e-62 242.3 175 68.0
Cc09_g06180 Coffea canephora HOM05D007226 ORTHO05D009160 3.8e-62 241.9 183 65.0
Potri.015G121101 Populus trichocarpa HOM05D007226 ORTHO05D009160 1.1e-61 240.4 138 81.2
GSVIVG01012076001 Vitis vinifera HOM05D007226 ORTHO05D009160 5.5e-61 238.0 181 66.3
Migut.M01975 Erythranthe guttata HOM05D007226 ORTHO05D009160 1.6e-60 236.5 184 65.2
SGA_v2.0_scaffold175G39365 Striga asiatica HOM05D007226 ORTHO05D009160 3.6e-60 235.3 149 75.2
Nn7g38162 Nelumbo nucifera HOM05D007226 ORTHO05D009160 1.4e-59 233.4 154 70.8
CSS0023119 Camellia sinensis var. sinensis HOM05D007226 ORTHO05D009160 1.8e-59 233.0 138 77.5
Sabra15G0137600 Salix brachista HOM05D007226 ORTHO05D009160 1.2e-58 230.3 180 66.1
Cfa000717 Carpinus fangiana HOM05D007226 ORTHO05D009160 1.3e-57 226.9 159 69.8
CiPaw.09G078000 Carya illinoinensis HOM05D007226 ORTHO05D009160 2.8e-57 225.7 137 75.9
ECA238G0615 Erigeron canadensis HOM05D007226 ORTHO05D009160 3.7e-57 225.3 183 63.4
TAR371G1071 Trochodendron aralioides HOM05D007226 ORTHO05D009160 3.7e-57 225.3 163 69.3
SalBow6G7060 Salvia bowleyana HOM05D007226 ORTHO05D009160 1.4e-56 223.4 173 64.2
SalBow8G0530 Salvia bowleyana HOM05D007226 ORTHO05D009160 1.4e-56 223.4 173 64.2
Thhalv10001050m.g Eutrema salsugineum HOM05D007226 ORTHO05D009160 1.8e-56 223.0 172 62.2
Peaxi162Scf00149g00723 Petunia axillaris HOM05D007226 ORTHO05D009160 2.4e-56 222.6 112 90.2
Ciclev10017084m.g Citrus clementina HOM05D007226 ORTHO05D009160 3.1e-56 222.2 138 73.2
PGR004G0179 Punica granatum HOM05D007226 ORTHO05D009160 3.1e-56 222.2 130 74.6
AT5G45040 Arabidopsis thaliana HOM05D007226 ORTHO05D009160 7.0e-56 221.1 129 78.3
QL11p017833 Quercus lobata HOM05D007226 ORTHO05D009160 7.0e-56 221.1 177 65.0
Rhsim02G0212700 Rhododendron simsii HOM05D007226 ORTHO05D009160 9.1e-56 220.7 170 65.9
CARHR177680 Cardamine hirsuta HOM05D007226 ORTHO05D009160 1.2e-55 220.3 177 61.6
Manes.16G056825 Manihot esculenta HOM05D007226 ORTHO05D009160 1.6e-55 219.9 131 77.1
BcaC03g16718 Brassica carinata HOM05D007226 ORTHO05D009160 2.0e-55 219.5 166 62.7
Lsat_1_v5_gn_2_62900 Lactuca sativa HOM05D007226 ORTHO05D009160 2.0e-55 219.5 180 63.3
BolC2t10627H Brassica oleracea HOM05D007226 ORTHO05D009160 2.7e-55 219.2 166 62.7
C02p45740 Brassica napus HOM05D007226 ORTHO05D009160 3.5e-55 218.8 166 62.7
BolC2t10635H Brassica oleracea HOM05D007226 ORTHO05D009160 4.5e-55 218.4 166 62.0
Thecc.06G141800 Theobroma cacao HOM05D007226 ORTHO05D009160 4.5e-55 218.4 137 73.7
BraA02t07911Z Brassica rapa HOM05D007226 ORTHO05D009160 1.3e-54 216.9 166 62.0
AL8G14200 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 1.7e-54 216.5 130 76.2
Prupe.4G111200 Prunus persica HOM05D007226 ORTHO05D009160 1.7e-54 216.5 173 63.0
BcaB07g30483 Brassica carinata HOM05D007226 ORTHO05D009160 2.2e-54 216.1 166 62.7
FvH4_3g12220 Fragaria vesca HOM05D007226 ORTHO05D009160 2.2e-54 216.1 140 75.0
FAN21G0149 Fragaria x ananassa HOM05D007226 ORTHO05D009160 2.2e-54 216.1 143 72.7
Sp2g09820 Schrenkiella parvula HOM05D007226 ORTHO05D009160 2.2e-54 216.1 176 61.4
Atru.chr10.515 Acer truncatum HOM05D007226 ORTHO05D009160 3.8e-54 215.3 179 61.5
A02p28790 Brassica napus HOM05D007226 ORTHO05D009160 3.8e-54 215.3 166 62.0
MD05G1252700 Malus domestica HOM05D007226 ORTHO05D009160 3.8e-54 215.3 146 70.5
Cpa.g.sc135.15 Carica papaya HOM05D007226 ORTHO05D009160 5.0e-54 214.9 135 71.1
Ca_18766_v3 Cicer arietinum L. HOM05D007226 ORTHO05D009160 8.5e-54 214.2 136 70.6
DCAR_004326 Daucus carota HOM05D007226 ORTHO05D009160 8.5e-54 214.2 138 73.9
TWI38G0719 Tripterygium wilfordii HOM05D007226 ORTHO05D009160 1.5e-53 213.4 171 62.6
AL8G14380 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 2.5e-53 212.6 130 75.4
COL.COLO4_30987 Corchorus olitorius HOM05D007226 ORTHO05D009160 3.2e-53 212.2 131 74.0
FAN25G1348 Fragaria x ananassa HOM05D007226 ORTHO05D009160 3.2e-53 212.2 143 71.3
Carub.0008s0327 Capsella rubella HOM05D007226 ORTHO05D009160 9.4e-53 210.7 172 59.3
Gohir.D06G145000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 1.2e-52 210.3 178 57.9
Gorai.010G168700 Gossypium raimondii HOM05D007226 ORTHO05D009160 1.2e-52 210.3 178 57.9
vmacro03514 Vaccinium macrocarpon HOM05D007226 ORTHO05D009160 2.7e-52 209.1 231 51.5
Gohir.A06G141000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 3.6e-52 208.8 178 57.9
Medtr4g083990 Medicago truncatula HOM05D007226 ORTHO05D009160 3.6e-52 208.8 158 62.7
Lj4g0002757 Lotus japonicus HOM05D007226 ORTHO05D009160 4.7e-52 208.4 149 67.1
Eucgr.E01876 Eucalyptus grandis HOM05D007226 ORTHO05D009160 6.1e-52 208.0 135 71.9
Lalb_Chr05g0219731 Lupinus albus HOM05D007226 ORTHO05D009160 6.1e-52 208.0 135 70.4
VMungo0251G0617 Vigna mungo HOM05D007226 ORTHO05D009160 6.1e-52 208.0 148 68.2
Glyma.07G221900 Glycine max HOM05D007226 ORTHO05D009160 8.0e-52 207.6 160 63.1
CDE06G2689 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 1.0e-51 207.2 150 64.7
Phvul.002G098700 Phaseolus vulgaris HOM05D007226 ORTHO05D009160 1.0e-51 207.2 151 64.2
Haze_06036 Corylus avellana HOM05D007226 ORTHO05D009160 1.8e-51 206.5 175 61.1
Duzib192G0307 Durio zibethinus HOM05D007226 ORTHO05D009160 3.0e-51 205.7 133 71.4
PSO675G1576 Papaver somniferum HOM05D007226 ORTHO05D009160 4.0e-51 205.3 133 71.4
RcHm_v2.0_Chr5g0020011 Rosa chinensis HOM05D007226 ORTHO05D009160 8.8e-51 204.1 117 81.2
Aa31LG9G8170 Aethionema arabicum HOM05D007226 ORTHO05D009160 1.2e-50 203.8 184 57.1
Aqoxy1G01459 Aquilegia oxysepala HOM05D007226 ORTHO05D009160 2.0e-50 203.0 146 65.1
Oeu056023.2 Olea europaea HOM05D007226 ORTHO05D009160 1.3e-49 200.3 106 84.9
THA.LOC104812913 Tarenaya hassleriana HOM05D007226 ORTHO05D009160 8.3e-49 197.6 166 58.4
ClCG01G025800 Citrullus lanatus HOM05D007226 ORTHO05D009160 1.1e-48 197.2 164 56.7
CDE02G1897 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 1.4e-48 196.8 143 64.3
arahy.Tifrunner.gnm1.ann1.X3ZR55 Arachis hypogaea HOM05D007226 ORTHO05D009160 1.3e-46 190.3 129 68.2
TPR.G20974 Trifolium pratense HOM05D007226 ORTHO05D009160 1.7e-46 189.9 107 77.6
Ah.05g171090 Amaranthus hybridus HOM05D007226 ORTHO05D009160 2.3e-46 189.5 136 65.4
C02p45640 Brassica napus HOM05D007226 ORTHO05D009160 3.3e-45 185.7 145 61.4
CsaV3_6G053010 Cucumis sativus L. HOM05D007226 ORTHO05D009160 7.2e-45 184.5 136 60.3
arahy.Tifrunner.gnm1.ann1.8FEK6M Arachis hypogaea HOM05D007226 ORTHO05D009160 1.2e-44 183.7 107 73.8
ATR0763G163 Amborella trichopoda HOM05D007226 ORTHO05D009160 1.0e-43 180.6 197 51.3
MELO3C007008.2 Cucumis melo HOM05D007226 ORTHO05D009160 8.9e-43 177.6 102 72.5
Sc15g0002750 Simmondsia chinensis HOM05D007226 ORTHO05D009160 8.3e-41 171.0 107 67.3
SEGI_36655 Sequoiadendron giganteum HOM05D007226 ORTHO05D009160 4.5e-39 165.2 116 62.1
AUR62014337 Chenopodium quinoa HOM05D005358 ORTHO05D006384 6.6e-38 161.4 108 67.6
SMO356G0712 Selaginella moellendorffii HOM05D007226 ORTHO05D009160 1.8e-35 153.3 106 62.3
Sed0015403 Sechium edule HOM05D007226 ORTHO05D009160 5.2e-35 151.8 91 69.2
AagrBONN_evm.TU.Sc2ySwM_369.234 Anthoceros agrestis HOM05D007226 ORTHO05D009160 1.2e-34 150.6 135 51.9
Mapoly0135s0037 Marchantia polymorpha HOM05D007226 ORTHO05D009160 7.5e-34 147.9 163 46.0
MBI19_g38421_MAGBIO Magnolia biondii HOM05D007226 ORTHO05D009160 1.9e-32 143.3 151 50.3
Pp3c13_8590 Physcomitrium patens HOM05D007226 ORTHO05D009160 1.2e-31 140.6 91 64.8
Psat7g130920 Pisum sativum HOM05D007226 ORTHO05D009160 1.7e-30 136.7 135 50.4
HanXRQChr14g0447281 Helianthus annuus HOM05D007226 ORTHO05D009160 7.3e-29 131.3 134 51.5
Glyma.20G020600 Glycine max HOM05D007226 ORTHO05D009160 1.1e-27 127.5 138 49.3
HPP92_015945 Vanilla planifolia HOM05D007226 ORTHO05D009160 4.0e-27 125.6 117 53.0
Lj2C351T11 Lonicera japonica HOM05D007226 ORTHO05D009160 9.8e-26 120.9 68 76.5
Hma1.2p1_0040F.1_g025140 Hydrangea macrophylla HOM05D007226 ORTHO05D009160 1.7e-25 120.2 59 86.4
Cre16.g670950 Chlamydomonas reinhardtii HOM05D007226 ORTHO05D009160 3.7e-25 119.0 89 53.9
MCO04G097 Micromonas commoda HOM05D007226 ORTHO05D009160 1.1e-24 117.5 89 51.7
PSO541G5038 Papaver somniferum HOM05D007226 ORTHO05D009160 1.9e-24 116.7 79 69.6
PRCOL_00005064 Prasinoderma coloniale HOM05D007226 ORTHO05D009160 8.3e-17 91.3 87 44.8
MD10G1233800 Malus domestica HOM05D007226 ORTHO05D009160 1.2e-12 77.4 73 53.4
HPP92_015957 Vanilla planifolia HOM05D007226 ORTHO05D009160 6.0e-07 58.5 42 54.8


User provided reference genes

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