Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g017350 Solanum pennellii HOM05D008614 ORTHO05D010420 7.0e-73 277.3 154 100.0
PGSC0003DMG400009424 Solanum tuberosum HOM05D008614 ORTHO05D010420 8.4e-34 147.5 158 63.9
Solyc02g068250.4 Solanum lycopersicum HOM05D008614 ORTHO05D010420 1.9e-33 146.4 85 95.3
Peaxi162Scf00981g00031 Petunia axillaris HOM05D008614 ORTHO05D010420 9.6e-30 134.0 174 48.3
Nitab4.5_0003878g0060 Nicotiana tabacum HOM05D008614 ORTHO05D010420 1.4e-20 103.6 132 48.5
Oeu000527.1 Olea europaea HOM05D008614 ORTHO05D010420 3.5e-16 89.0 96 52.1
Atru.chr3.21 Acer truncatum HOM05D008614 ORTHO05D010420 1.1e-14 84.0 153 39.2
DCAR_014125 Daucus carota HOM05D008614 ORTHO05D010420 9.6e-14 80.9 156 40.4
FAN19G2600 Fragaria x ananassa HOM05D008614 ORTHO05D010420 1.3e-13 80.5 163 37.4
FAN23G2016 Fragaria x ananassa HOM05D008614 ORTHO05D010420 1.3e-13 80.5 163 37.4
FAN26G1944 Fragaria x ananassa HOM05D008614 ORTHO05D010420 1.3e-13 80.5 163 37.4
Prupe.7G188200 Prunus persica HOM05D008614 ORTHO05D010420 1.3e-13 80.5 166 38.0
Hma1.2p1_0034F.1_g021610 Hydrangea macrophylla HOM05D008614 ORTHO05D010420 4.8e-13 78.6 100 48.0
FAN23G1636 Fragaria x ananassa HOM05D008614 ORTHO05D010420 8.1e-13 77.8 102 51.0
Dinv19115 Davidia involucrata HOM05D008614 ORTHO05D010420 1.8e-12 76.6 168 36.9
Aqoxy6G03038 Aquilegia oxysepala HOM05D008614 ORTHO05D010420 2.4e-12 76.3 87 52.9
MD15G1227100 Malus domestica HOM05D008614 ORTHO05D010420 6.9e-12 74.7 150 35.3
Thecc.01G001000 Theobroma cacao HOM05D008614 ORTHO05D010420 6.9e-12 74.7 90 50.0
TWI60G1637 Tripterygium wilfordii HOM05D008614 ORTHO05D010420 9.0e-12 74.3 183 35.0
Dinv40227 Davidia involucrata HOM05D008614 ORTHO05D010420 1.5e-11 73.6 170 34.7
PGR102G2725 Punica granatum HOM05D008614 ORTHO05D010420 1.5e-11 73.6 90 52.2
TAR376G0905 Trochodendron aralioides HOM05D008614 ORTHO05D010420 1.5e-11 73.6 142 37.3
FAN28G0102 Fragaria x ananassa HOM05D008614 ORTHO05D010420 2.0e-11 73.2 89 52.8
Nitab4.5_0000235g0030 Nicotiana tabacum HOM05D008614 ORTHO05D010420 2.6e-11 72.8 102 46.1
Potri.011G146000 Populus trichocarpa HOM05D008614 ORTHO05D010420 1.3e-10 70.5 96 47.9
Migut.K00408 Erythranthe guttata HOM05D008614 ORTHO05D010420 1.7e-10 70.1 147 36.1
FvH4_1g09770 Fragaria vesca HOM05D008614 ORTHO05D010420 1.7e-10 70.1 82 51.2
FAN23G3076 Fragaria x ananassa HOM05D008614 ORTHO05D010420 8.4e-10 67.8 90 50.0
Nitab4.5_0003141g0010 Nicotiana tabacum HOM05D008614 ORTHO05D010420 8.4e-10 67.8 131 38.2
Potri.001G456100 Populus trichocarpa HOM05D008614 ORTHO05D010420 8.4e-10 67.8 177 33.3
Glyma.09G195300 Glycine max HOM05D008614 ORTHO05D010420 2.4e-09 66.2 99 40.4
Medtr8g072450 Medicago truncatula HOM05D008614 ORTHO05D010420 7.1e-09 64.7 94 44.7
Lj2A507G42 Lonicera japonica HOM05D008614 ORTHO05D010420 1.2e-08 63.9 93 45.2
BcaC03g16890 Brassica carinata HOM05D008115 ORTHO05D010112 2.7e-08 62.8 103 35.9
A02p30340 Brassica napus HOM05D008115 ORTHO05D010112 2.7e-08 62.8 103 35.9
C02p47870 Brassica napus HOM05D008115 ORTHO05D010112 2.7e-08 62.8 103 35.9
BolC2t10820H Brassica oleracea HOM05D008115 ORTHO05D010112 2.7e-08 62.8 103 35.9
BraA02t08049Z Brassica rapa HOM05D008115 ORTHO05D010112 2.7e-08 62.8 103 35.9
MBI01_g32847_MAGBIO Magnolia biondii HOM05D039595 ORTHO05D010420 2.7e-08 62.8 106 40.6
Rhsim10G0190400 Rhododendron simsii HOM05D008614 ORTHO05D010420 6.0e-08 61.6 105 41.0
AL8G11540 Arabidopsis lyrata HOM05D008115 ORTHO05D010112 7.9e-08 61.2 103 35.0
Actinidia22866 Actinidia chinensis HOM05D008614 ORTHO05D010420 1.0e-07 60.8 96 41.7
Lsat_1_v5_gn_3_68380 Lactuca sativa HOM05D008614 ORTHO05D010420 1.3e-07 60.5 114 38.6
MBI04_g42539_MAGBIO Magnolia biondii HOM05D008614 ORTHO05D010420 1.3e-07 60.5 71 49.3
Cpa.g.sc6.374 Carica papaya HOM05D008614 ORTHO05D010420 1.8e-07 60.1 153 35.3
Dinv28956 Davidia involucrata HOM05D000381 ORTHO05D010112 1.8e-07 60.1 89 40.4
ECA246G3890 Erigeron canadensis HOM05D008614 ORTHO05D010420 1.8e-07 60.1 67 46.3
Carub.0008s0112 Capsella rubella HOM05D008115 ORTHO05D010112 2.3e-07 59.7 84 38.1
RhsimUnG0112700 Rhododendron simsii HOM05D008614 ORTHO05D010420 2.3e-07 59.7 105 40.0
Sp2g11610 Schrenkiella parvula HOM05D008115 ORTHO05D010112 3.0e-07 59.3 84 38.1
BcaB07g30820 Brassica carinata HOM05D008115 ORTHO05D010112 3.9e-07 58.9 84 38.1
Thhalv10001038m.g Eutrema salsugineum HOM05D008115 ORTHO05D010112 3.9e-07 58.9 84 38.1
Aa31LG9G6090 Aethionema arabicum HOM05D008115 ORTHO05D010112 5.1e-07 58.5 84 35.7
CARHR174700 Cardamine hirsuta HOM05D008115 ORTHO05D010112 5.1e-07 58.5 84 36.9
COL.COLO4_25085 Corchorus olitorius HOM05D008614 ORTHO05D010420 6.7e-07 58.2 50 62.0
THA.LOC104806705 Tarenaya hassleriana HOM05D008115 ORTHO05D010112 8.7e-07 57.8 83 38.6
Gohir.A08G156700 Gossypium hirsutum HOM05D008115 ORTHO05D010112 1.5e-06 57.0 96 36.5
AT5G46795 Arabidopsis thaliana HOM05D008115 ORTHO05D010112 1.9e-06 56.6 88 36.4
Aqoxy3G02357 Aquilegia oxysepala HOM05D008115 ORTHO05D010112 2.5e-06 56.2 87 41.4
CsaV3_3G049200 Cucumis sativus L. HOM05D008115 ORTHO05D010112 2.5e-06 56.2 85 37.6
A09p22550 Brassica napus HOM05D008115 ORTHO05D010112 3.3e-06 55.8 84 35.7
Ciclev10002723m.g Citrus clementina HOM05D008614 ORTHO05D010420 3.3e-06 55.8 87 48.3
Gohir.D08G177100 Gossypium hirsutum HOM05D008115 ORTHO05D010112 3.3e-06 55.8 96 36.5
SGA_v2.0_scaffold183G39898 Striga asiatica HOM05D008614 ORTHO05D010420 3.3e-06 55.8 97 41.2
BcaC04g21681 Brassica carinata HOM05D008115 ORTHO05D010112 4.3e-06 55.5 84 35.7
C09p28900 Brassica napus HOM05D008115 ORTHO05D010112 4.3e-06 55.5 84 35.7
Gorai.004G185300 Gossypium raimondii HOM05D008115 ORTHO05D010112 4.3e-06 55.5 96 36.5
PGR042G2453 Punica granatum HOM05D008115 ORTHO05D010112 4.3e-06 55.5 88 38.6
FAN04G2182 Fragaria x ananassa HOM05D008115 ORTHO05D010112 7.4e-06 54.7 87 35.6
FAN08G1703 Fragaria x ananassa HOM05D008115 ORTHO05D010112 7.4e-06 54.7 87 35.6
FAN13G1458 Fragaria x ananassa HOM05D008115 ORTHO05D010112 7.4e-06 54.7 87 35.6
FAN18G3637 Fragaria x ananassa HOM05D008115 ORTHO05D010112 7.4e-06 54.7 87 35.6


User provided reference genes

Program Settings