Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g016810 Solanum pennellii HOM05D008571 ORTHO05D004433 4.2e-98 361.3 176 100.0
Sopen03g027090 Solanum pennellii HOM05D000002 ORTHO05D002065 4.0e-48 195.3 141 68.1
FvH4_5g31431 Fragaria vesca HOM05D000002 ORTHO05D004433 2.0e-44 183.0 165 56.4
RcHm_v2.0_Chr3g0481931 Rosa chinensis HOM05D000002 ORTHO05D000001 3.9e-43 178.7 165 55.8
Cc04_g10140 Coffea canephora HOM05D000002 ORTHO05D004433 1.4e-40 170.2 165 54.5
Sopen12g010550 Solanum pennellii HOM05D008571 ORTHO05D011280 2.5e-34 149.4 120 65.8
BolC8t49584H Brassica oleracea HOM05D000002 ORTHO05D004433 6.2e-33 144.8 162 49.4
Nn4g23986 Nelumbo nucifera HOM05D000002 ORTHO05D000001 4.4e-31 138.7 165 44.8
Cc05_g05430 Coffea canephora HOM05D000002 ORTHO05D004433 2.2e-30 136.3 131 53.4
ECA234G3440 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.9e-30 136.0 165 43.6
ECA240G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.9e-30 135.2 165 43.6
ECA236G5067 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.2e-29 132.5 165 44.8
SHI45609 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-29 132.1 165 43.6
ECA240G4274 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.2e-29 131.0 165 44.2
Sopen11g022370 Solanum pennellii HOM05D000036 ORTHO05D005472 9.2e-29 131.0 90 71.1
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-28 130.6 165 41.8
SHI49936 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-28 130.6 165 43.6
ECA233G1874 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.7e-28 129.4 165 43.6
SHI18328 Sapria himalayana HOM05D000002 ORTHO05D000001 6.0e-28 128.3 165 43.6
ECA238G3349 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.8e-28 127.9 165 40.0
SHI14609 Sapria himalayana HOM05D000002 ORTHO05D000001 7.8e-28 127.9 165 41.8
Sopen09g011970 Solanum pennellii HOM05D008571 ORTHO05D011280 7.8e-28 127.9 90 68.9
ECA234G1536 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-27 126.3 165 43.0
ECA248G3794 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.0e-27 125.9 166 42.8
TAR610G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.0e-27 125.9 165 40.6
Thhalv10019725m.g Eutrema salsugineum HOM05D000002 ORTHO05D004433 3.9e-27 125.6 122 51.6
ECA233G2777 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.7e-27 124.4 165 42.4
ECA248G0687 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.7e-27 124.4 165 42.4
MD01G1096700 Malus domestica HOM05D000002 ORTHO05D000001 8.7e-27 124.4 165 40.6
SHI04168 Sapria himalayana HOM05D000002 ORTHO05D004433 8.7e-27 124.4 165 41.8
ECA238G4301 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-26 124.0 165 41.2
ECA247G3536 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-26 124.0 165 41.8
Nn8g39416 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.9e-26 123.2 165 42.4
SHI38827 Sapria himalayana HOM05D000002 ORTHO05D004433 3.3e-26 122.5 165 41.8
ECA248G0669 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.3e-26 121.3 166 41.6
Nn1g02545 Nelumbo nucifera HOM05D000002 ORTHO05D004433 7.3e-26 121.3 139 46.0
SHI44323 Sapria himalayana HOM05D000002 ORTHO05D000001 7.3e-26 121.3 165 41.8
ECA246G3093 Erigeron canadensis HOM05D001467 ORTHO05D001214 9.6e-26 120.9 165 40.6
PSO675G3339 Papaver somniferum HOM05D000002 ORTHO05D004433 1.2e-25 120.6 165 39.4
Ah.13g069620 Amaranthus hybridus HOM05D000002 ORTHO05D004433 8.1e-25 117.9 163 39.3
SHI06746 Sapria himalayana HOM05D000002 ORTHO05D004433 8.1e-25 117.9 137 45.3
Ah.16g108610 Amaranthus hybridus HOM05D000002 ORTHO05D004433 6.9e-24 114.8 165 37.6
Sopen05g008270 Solanum pennellii HOM05D000006 ORTHO05D000695 6.9e-24 114.8 112 58.9
Ah.01g008310 Amaranthus hybridus HOM05D000002 ORTHO05D004433 9.0e-24 114.4 163 38.0
Nn1g09492 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.5e-23 113.6 163 39.3
SHI16256 Sapria himalayana HOM05D000002 ORTHO05D004433 1.5e-23 113.6 165 39.4
Ah.13g077590 Amaranthus hybridus HOM05D000002 ORTHO05D000001 2.0e-23 113.2 163 37.4
SHI07649 Sapria himalayana HOM05D000002 ORTHO05D004433 1.7e-22 110.2 165 40.0
ECA233G2147 Erigeron canadensis HOM05D000509 ORTHO05D004433 2.9e-22 109.4 158 41.1
Oeu003015.1 Olea europaea HOM05D000002 ORTHO05D004433 3.8e-22 109.0 160 38.1
TAR009G0003 Trochodendron aralioides HOM05D008571 ORTHO05D004433 4.2e-21 105.5 91 60.4
CiPaw.08G098800 Carya illinoinensis HOM05D000002 ORTHO05D004433 2.1e-20 103.2 129 46.5
SHI47859 Sapria himalayana HOM05D000002 ORTHO05D004433 2.7e-20 102.8 102 52.0
SHI04823 Sapria himalayana HOM05D000002 ORTHO05D004433 3.5e-20 102.4 164 37.2
Oeu026048.1 Olea europaea HOM05D000002 ORTHO05D000001 4.6e-20 102.1 128 43.8
SHI21269 Sapria himalayana HOM05D000002 ORTHO05D004433 1.0e-19 100.9 164 38.4
SHI51732 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-19 100.1 165 37.0
SHI05549 Sapria himalayana HOM05D000002 ORTHO05D004433 2.3e-19 99.8 142 38.7
ECA234G3041 Erigeron canadensis HOM05D001549 ORTHO05D003098 1.1e-18 97.4 170 35.3
SHI12756 Sapria himalayana HOM05D000002 ORTHO05D004433 1.1e-18 97.4 159 38.4
Sopen03g008290 Solanum pennellii HOM05D000002 ORTHO05D004433 1.1e-18 97.4 132 41.7
Nn5g27722 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.5e-18 97.1 130 39.2
Oeu006707.1 Olea europaea HOM05D000002 ORTHO05D004433 1.9e-18 96.7 79 57.0
SHI03937 Sapria himalayana HOM05D000002 ORTHO05D004433 1.9e-18 96.7 165 37.0
Thhalv10000559m.g Eutrema salsugineum HOM05D008571 ORTHO05D004433 4.3e-18 95.5 82 53.7
Sopen09g027930 Solanum pennellii HOM05D000002 ORTHO05D004433 1.6e-17 93.6 124 41.9
ECA233G2071 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-17 93.2 165 35.8
Sopen12g018110 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-17 93.2 128 41.4
ECA246G0537 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.6e-17 92.4 165 37.6
Sopen05g027370 Solanum pennellii HOM05D000002 ORTHO05D004433 3.6e-17 92.4 118 41.5
Nn1g01470 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.1e-16 90.9 131 38.9
SHI18909 Sapria himalayana HOM05D000002 ORTHO05D004433 1.8e-16 90.1 95 48.4
PGR044G0355 Punica granatum HOM05D000097 ORTHO05D000041 9.9e-15 84.3 80 55.0
PGR044G1025 Punica granatum HOM05D000097 ORTHO05D000041 9.9e-15 84.3 75 57.3
CSS0021348 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 1.7e-14 83.6 90 46.7
Nn2g15606 Nelumbo nucifera HOM05D000006 ORTHO05D004433 2.2e-14 83.2 163 28.8
SHI27796 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-14 82.8 78 52.6
Nn2g15808 Nelumbo nucifera HOM05D000006 ORTHO05D004433 3.8e-14 82.4 133 33.1
Oeu034487.1 Olea europaea HOM05D000002 ORTHO05D004433 3.8e-14 82.4 89 43.8
Oeu035997.1 Olea europaea HOM05D000002 ORTHO05D004433 3.8e-14 82.4 127 38.6
SHI18424 Sapria himalayana HOM05D000002 ORTHO05D004433 4.9e-14 82.0 78 52.6
PGSC0003DMG400040582 Solanum tuberosum HOM05D008571 ORTHO05D011280 6.4e-14 81.6 58 72.4
SHI02070 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-13 80.9 78 53.8
SHI43075 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-13 80.9 85 48.2
SHI45690 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-13 80.9 78 52.6
SHI10030 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-13 80.5 78 51.3
SHI39436 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-13 80.5 78 52.6
SHI39438 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-13 80.5 78 52.6
Oeu012846.1 Olea europaea HOM05D003971 ORTHO05D004433 2.4e-13 79.7 126 37.3
PGR044G2365 Punica granatum HOM05D000097 ORTHO05D000041 7.1e-13 78.2 78 52.6
SHI18394 Sapria himalayana HOM05D000002 ORTHO05D004433 1.2e-12 77.4 74 51.4
SHI47495 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-12 77.4 74 52.7
Nn3g20325 Nelumbo nucifera HOM05D008571 ORTHO05D004433 3.5e-12 75.9 66 50.0
Nn4g25779 Nelumbo nucifera HOM05D000002 ORTHO05D004433 3.5e-12 75.9 133 30.8
PGR044G1072 Punica granatum HOM05D000097 ORTHO05D000041 4.6e-12 75.5 74 54.1
PGR044G1153 Punica granatum HOM05D000097 ORTHO05D000041 4.6e-12 75.5 74 54.1
SHI32918 Sapria himalayana HOM05D000002 ORTHO05D000001 4.6e-12 75.5 74 51.4
ECA246G2496 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.0e-12 75.1 117 36.8
Nn1g07613 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.0e-11 74.3 74 51.4
SHI43061 Sapria himalayana HOM05D000002 ORTHO05D004433 2.3e-11 73.2 74 50.0
Sopen03g007650 Solanum pennellii HOM05D000002 ORTHO05D004433 3.9e-11 72.4 99 40.4
ECA233G2319 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.1e-11 72.0 74 50.0
Sopen02g010540 Solanum pennellii HOM05D008571 ORTHO05D011280 6.7e-11 71.6 44 77.3
PGSC0003DMG400024370 Solanum tuberosum HOM05D008571 ORTHO05D011280 6.7e-11 71.6 44 79.5
Sopen05g024280 Solanum pennellii HOM05D008571 ORTHO05D011280 8.7e-11 71.2 44 79.5
SHI10488 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-10 70.1 65 53.8
PGSC0003DMG400021964 Solanum tuberosum HOM05D008571 ORTHO05D011280 1.9e-10 70.1 44 77.3
Oeu034209.1 Olea europaea HOM05D000002 ORTHO05D004433 2.5e-10 69.7 103 39.8
Sopen08g023440 Solanum pennellii HOM05D003027 ORTHO05D011280 2.5e-10 69.7 44 77.3
Nn5g30038 Nelumbo nucifera HOM05D000002 ORTHO05D004433 3.3e-10 69.3 91 40.7
ECA246G4710 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-10 68.9 75 45.3
SHI03641 Sapria himalayana HOM05D000002 ORTHO05D004433 9.6e-10 67.8 74 44.6
SHI00405 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-09 67.4 69 49.3
PGSC0003DMG400001585 Solanum tuberosum HOM05D000002 ORTHO05D004433 2.1e-09 66.6 74 41.9
Sopen10g024020 Solanum pennellii HOM05D008571 ORTHO05D011280 2.8e-09 66.2 92 40.2
Nn8g40101 Nelumbo nucifera HOM05D000002 ORTHO05D004433 4.8e-09 65.5 120 34.2
PGSC0003DMG400038206 Solanum tuberosum HOM05D008571 ORTHO05D011280 4.8e-09 65.5 53 67.9
CAN.G1829.1 Capsicum annuum HOM05D000583 ORTHO05D004433 1.1e-08 64.3 57 52.6
ECA240G3347 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-08 63.9 127 32.3
CSS0020823 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-08 63.2 62 51.6
ECA232G4651 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.1e-08 62.8 55 54.5
SHI37107 Sapria himalayana HOM05D000002 ORTHO05D004433 1.2e-07 60.8 63 46.0
Nn1g03239 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.5e-07 60.5 122 32.8
ECA247G2369 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.0e-07 60.1 98 37.8
Oeu022773.1 Olea europaea HOM05D000002 ORTHO05D004433 2.6e-07 59.7 101 37.6
Sopen09g028980 Solanum pennellii HOM05D000002 ORTHO05D004433 2.6e-07 59.7 101 34.7
ECA238G4719 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.8e-07 58.5 165 26.7
Rhsim05G0076500 Rhododendron simsii HOM05D000002 ORTHO05D000001 7.6e-07 58.2 138 26.1
Oeu055579.1 Olea europaea HOM05D000002 ORTHO05D004433 1.3e-06 57.4 101 36.6
Nn8g40511 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.7e-06 57.0 90 31.1
Sopen05g013900 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-06 56.6 42 57.1
Sed0004206 Sechium edule HOM05D000002 ORTHO05D004433 2.9e-06 56.2 41 63.4
Gohir.D10G094150 Gossypium hirsutum HOM05D000002 ORTHO05D004433 3.8e-06 55.8 84 36.9


User provided reference genes

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