Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g016110 Solanum pennellii HOM05D007565 ORTHO05D009551 7.7e-88 327.0 155 100.0
Solyc02g066920.3 Solanum lycopersicum HOM05D007565 ORTHO05D009551 6.1e-85 317.4 155 96.8
PGSC0003DMG400025155 Solanum tuberosum HOM05D007565 ORTHO05D009551 7.8e-80 300.4 153 91.5
CAN.G398.21 Capsicum annuum HOM05D007565 ORTHO05D009551 1.6e-72 276.2 152 84.9
Nitab4.5_0002957g0030 Nicotiana tabacum HOM05D000753 ORTHO05D003622 1.2e-61 240.0 153 73.9
Nitab4.5_0000212g0260 Nicotiana tabacum HOM05D000753 ORTHO05D003622 1.2e-59 233.4 168 67.3
Peaxi162Scf00991g00215 Petunia axillaris HOM05D007565 ORTHO05D009551 7.5e-59 230.7 147 74.8
Dinv33829 Davidia involucrata HOM05D007565 ORTHO05D009551 9.3e-41 170.6 161 54.7
HanXRQChr07g0199761 Helianthus annuus HOM05D007565 ORTHO05D009551 3.0e-39 165.6 104 74.0
CSS0012139 Camellia sinensis var. sinensis HOM05D007565 ORTHO05D009551 1.5e-38 163.3 96 77.1
Actinidia17585 Actinidia chinensis HOM05D007565 ORTHO05D009551 4.3e-38 161.8 111 71.2
Cc07_g04240 Coffea canephora HOM05D007565 ORTHO05D009551 2.8e-37 159.1 154 55.2
ECA238G4035 Erigeron canadensis HOM05D007565 ORTHO05D009551 1.8e-36 156.4 96 76.0
MSTRG.2997 Avicennia marina HOM05D007565 ORTHO05D009551 1.5e-35 153.3 155 54.8
SalBow1G1387 Salvia bowleyana HOM05D007565 ORTHO05D009551 1.5e-35 153.3 94 75.5
SalBow1G4541 Salvia bowleyana HOM05D007565 ORTHO05D009551 1.5e-35 153.3 94 75.5
DCAR_025432 Daucus carota HOM05D007565 ORTHO05D009551 2.6e-35 152.5 114 64.0
Migut.H00623 Erythranthe guttata HOM05D007565 ORTHO05D009551 2.6e-35 152.5 110 68.2
Lsat_1_v5_gn_2_90121 Lactuca sativa HOM05D007565 ORTHO05D009551 3.4e-35 152.1 96 76.0
Lalb_Chr02g0158911 Lupinus albus HOM05D007565 ORTHO05D009551 3.4e-35 152.1 138 56.5
RcHm_v2.0_Chr2g0165831 Rosa chinensis HOM05D007565 ORTHO05D009551 7.6e-35 151.0 139 56.1
ATR0177G044 Amborella trichopoda HOM05D007565 ORTHO05D009551 2.9e-34 149.1 98 70.4
AUR62018189 Chenopodium quinoa HOM05D007565 ORTHO05D009551 4.9e-34 148.3 93 72.0
GSVIVG01032907001 Vitis vinifera HOM05D007565 ORTHO05D009551 4.9e-34 148.3 96 67.7
TPR.G10009 Trifolium pratense HOM05D007565 ORTHO05D009551 1.4e-33 146.7 117 62.4
Rhsim08G0074900 Rhododendron simsii HOM05D007565 ORTHO05D009551 1.9e-33 146.4 110 64.5
MD09G1066900 Malus domestica HOM05D007565 ORTHO05D009551 2.4e-33 146.0 99 66.7
FvH4_6g46840 Fragaria vesca HOM05D007565 ORTHO05D009551 3.2e-33 145.6 125 59.2
vmacro18148 Vaccinium macrocarpon HOM05D007565 ORTHO05D009551 3.2e-33 145.6 96 68.8
MBI16_g10827_MAGBIO Magnolia biondii HOM05D007565 ORTHO05D009551 4.2e-33 145.2 92 68.5
EL10Ac2g02475 Beta vulgaris HOM05D007565 ORTHO05D009551 5.4e-33 144.8 88 76.1
Gohir.A09G009400 Gossypium hirsutum HOM05D007565 ORTHO05D009551 5.4e-33 144.8 118 61.9
Gohir.D09G008500 Gossypium hirsutum HOM05D007565 ORTHO05D009551 5.4e-33 144.8 118 61.9
Gorai.006G010200 Gossypium raimondii HOM05D007565 ORTHO05D009551 5.4e-33 144.8 118 61.9
Aqoxy3G00508 Aquilegia oxysepala HOM05D007565 ORTHO05D009551 7.1e-33 144.4 144 54.2
CiPaw.04G055600 Carya illinoinensis HOM05D007565 ORTHO05D009551 9.3e-33 144.1 95 68.4
FAN05G3080 Fragaria x ananassa HOM05D007565 ORTHO05D009551 9.3e-33 144.1 142 54.2
AT5G39210 Arabidopsis thaliana HOM05D007565 ORTHO05D009551 2.1e-32 142.9 147 47.6
AUR62038674 Chenopodium quinoa HOM05D007565 ORTHO05D009551 2.1e-32 142.9 88 71.6
Eucgr.I02035 Eucalyptus grandis HOM05D007565 ORTHO05D009551 4.6e-32 141.7 150 49.3
arahy.Tifrunner.gnm1.ann1.GE184H Arachis hypogaea HOM05D007565 ORTHO05D009551 6.0e-32 141.4 95 65.3
arahy.Tifrunner.gnm1.ann1.X5N52Z Arachis hypogaea HOM05D007565 ORTHO05D009551 7.9e-32 141.0 95 65.3
TWI60G0367 Tripterygium wilfordii HOM05D007565 ORTHO05D009551 1.0e-31 140.6 115 56.5
FAN02G0614 Fragaria x ananassa HOM05D007565 ORTHO05D009551 1.3e-31 140.2 92 69.6
FAN09G3824 Fragaria x ananassa HOM05D007565 ORTHO05D009551 1.3e-31 140.2 92 69.6
FAN14G1390 Fragaria x ananassa HOM05D007565 ORTHO05D009551 1.3e-31 140.2 92 69.6
PGR004G0757 Punica granatum HOM05D007565 ORTHO05D009551 1.3e-31 140.2 95 66.3
TAR371G0975 Trochodendron aralioides HOM05D007565 ORTHO05D009551 1.3e-31 140.2 95 66.3
CARHR263200 Cardamine hirsuta HOM05D007565 ORTHO05D009551 2.3e-31 139.4 95 65.3
Manes.01G096100 Manihot esculenta HOM05D007565 ORTHO05D009551 2.3e-31 139.4 113 61.9
Thhalv10027973m.g Eutrema salsugineum HOM05D007565 ORTHO05D009551 3.9e-31 138.7 120 55.8
EL10Ac2g03143 Beta vulgaris HOM05D007565 ORTHO05D009551 5.1e-31 138.3 80 78.8
Nn4g23433 Nelumbo nucifera HOM05D007565 ORTHO05D009551 6.7e-31 137.9 86 72.1
Psat1g068880 Pisum sativum HOM05D007565 ORTHO05D009551 6.7e-31 137.9 136 52.2
unitig_736.g22275 Utricularia gibba HOM05D007565 ORTHO05D009551 6.7e-31 137.9 92 69.6
Prupe.3G254800 Prunus persica HOM05D007565 ORTHO05D009551 8.7e-31 137.5 99 66.7
CDE10G0935 Ceratophyllum demersum HOM05D007565 ORTHO05D009551 1.1e-30 137.1 96 62.5
CANSAT64G0913 Cannabis sativa HOM05D007565 ORTHO05D009551 4.3e-30 135.2 95 66.3
Carub.0007s3671 Capsella rubella HOM05D007565 ORTHO05D009551 4.3e-30 135.2 110 56.4
Cpa.g.sc14.177 Carica papaya HOM05D007565 ORTHO05D009551 4.3e-30 135.2 136 55.9
Potri.004G120300 Populus trichocarpa HOM05D007565 ORTHO05D009551 5.6e-30 134.8 123 54.5
Aa31LG9G16710 Aethionema arabicum HOM05D007565 ORTHO05D009551 7.4e-30 134.4 86 70.9
Lju41C3T7 Lonicera japonica HOM05D007565 ORTHO05D009551 7.4e-30 134.4 87 71.3
Sp7g02770 Schrenkiella parvula HOM05D007565 ORTHO05D009551 9.6e-30 134.0 95 63.2
Haze_14429 Corylus avellana HOM05D007565 ORTHO05D009551 1.3e-29 133.7 95 64.2
AL7G51250 Arabidopsis lyrata HOM05D007565 ORTHO05D009551 1.6e-29 133.3 148 45.9
BcaB06g27735 Brassica carinata HOM05D007565 ORTHO05D009551 1.6e-29 133.3 134 50.0
Glyma.19G030200 Glycine max HOM05D007565 ORTHO05D009551 1.6e-29 133.3 86 69.8
ClCG07G016310 Citrullus lanatus HOM05D007565 ORTHO05D009551 2.1e-29 132.9 95 66.3
BcaC02g08856 Brassica carinata HOM05D007565 ORTHO05D009551 3.7e-29 132.1 95 61.1
C04p49800 Brassica napus HOM05D007565 ORTHO05D009551 3.7e-29 132.1 95 61.1
BolC4t26571H Brassica oleracea HOM05D007565 ORTHO05D009551 3.7e-29 132.1 95 61.1
Cfa007669 Carpinus fangiana HOM05D007565 ORTHO05D009551 3.7e-29 132.1 94 63.8
Lj2g0002665 Lotus japonicus HOM05D007565 ORTHO05D009551 3.7e-29 132.1 135 51.1
Phvul.004G037200 Phaseolus vulgaris HOM05D007565 ORTHO05D009551 6.2e-29 131.3 86 68.6
VMungo0464G0770 Vigna mungo HOM05D007565 ORTHO05D009551 6.2e-29 131.3 86 68.6
THA.LOC104822868 Tarenaya hassleriana HOM05D007565 ORTHO05D009551 8.1e-29 131.0 86 67.4
A04p15530 Brassica napus HOM05D007565 ORTHO05D009551 1.1e-28 130.6 95 60.0
BraA04t17189Z Brassica rapa HOM05D007565 ORTHO05D009551 1.1e-28 130.6 95 60.0
Sed0016543 Sechium edule HOM05D007565 ORTHO05D009551 1.4e-28 130.2 96 62.5
PSO478G3761 Papaver somniferum HOM05D007565 ORTHO05D009551 3.1e-28 129.0 86 66.3
Sabra04G0069500 Salix brachista HOM05D007565 ORTHO05D009551 3.1e-28 129.0 123 53.7
CsaV3_4G009160 Cucumis sativus L. HOM05D007565 ORTHO05D009551 4.0e-28 128.6 91 64.8
Os01g0763700 Oryza sativa ssp. japonica HOM05D007565 ORTHO05D009551 6.9e-28 127.9 83 67.5
QL02p067580 Quercus lobata HOM05D007565 ORTHO05D009551 9.0e-28 127.5 85 70.6
Atru.chr8.429 Acer truncatum HOM05D007565 ORTHO05D009551 1.5e-27 126.7 98 63.3
MELO3C024877.2 Cucumis melo HOM05D007565 ORTHO05D009551 3.4e-27 125.6 89 65.2
COL.COLO4_04935 Corchorus olitorius HOM05D007565 ORTHO05D009551 4.9e-26 121.7 74 71.6
Ciclev10012981m.g Citrus clementina HOM05D007565 ORTHO05D009551 2.1e-24 116.3 96 58.3
Mapoly0001s0042 Marchantia polymorpha HOM05D007565 ORTHO05D009551 1.9e-22 109.8 79 60.8
Pp3c15_1410 Physcomitrium patens HOM05D007565 ORTHO05D009551 1.1e-20 104.0 78 55.1
Medtr6g015250 Medicago truncatula HOM05D007565 ORTHO05D009551 1.4e-20 103.6 116 50.9
Medtr6g015275 Medicago truncatula HOM05D007565 ORTHO05D009551 1.8e-20 103.2 74 64.9
CDE10G1057 Ceratophyllum demersum HOM05D000058 ORTHO05D000077 5.3e-20 101.7 77 58.4
SEGI_38587 Sequoiadendron giganteum HOM05D007565 ORTHO05D009551 9.0e-20 100.9 123 44.7
AagrBONN_evm.TU.Sc2ySwM_362.2072 Anthoceros agrestis HOM05D007565 ORTHO05D009551 2.6e-19 99.4 81 59.3
SMO133G0016 Selaginella moellendorffii HOM05D007565 ORTHO05D009551 5.8e-19 98.2 80 52.5
BcaC02g08855 Brassica carinata HOM05D007565 ORTHO05D009551 3.2e-17 92.4 95 48.4
BcaC02g08857 Brassica carinata HOM05D007565 ORTHO05D009551 3.2e-17 92.4 95 48.4
TPR.G36332 Trifolium pratense HOM05D007565 ORTHO05D009551 2.4e-12 76.3 48 68.8
MBI19_g17444_MAGBIO Magnolia biondii HOM05D000545 ORTHO05D000539 3.1e-12 75.9 47 68.1


User provided reference genes

Program Settings