Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g016050 Solanum pennellii HOM05D005465 ORTHO05D006612 7.6e-49 196.8 97 100.0
Solyc10g082064.1 Solanum lycopersicum HOM05D005465 ORTHO05D006612 2.8e-43 178.3 127 75.6
Sopen10g012570 Solanum pennellii HOM05D005465 ORTHO05D006612 1.4e-42 176.0 97 91.8
PGSC0003DMG400026569 Solanum tuberosum HOM05D005465 ORTHO05D006612 1.7e-40 169.1 127 71.7
Sopen10g006060 Solanum pennellii HOM05D005465 ORTHO05D006612 2.2e-40 168.7 97 89.7
Nitab4.5_0000212g0270 Nicotiana tabacum HOM05D005465 ORTHO05D006612 1.1e-36 156.4 127 65.4
Nitab4.5_0008370g0030 Nicotiana tabacum HOM05D005465 ORTHO05D006612 1.8e-34 149.1 122 64.8
Nitab4.5_0010535g0020 Nicotiana tabacum HOM05D005465 ORTHO05D006612 1.2e-33 146.4 127 58.3
Peaxi162Scf00991g00013 Petunia axillaris HOM05D005465 ORTHO05D006612 1.5e-33 146.0 127 60.6
Nitab4.5_0005910g0030 Nicotiana tabacum HOM05D005465 ORTHO05D006612 2.0e-33 145.6 128 57.0
Sopen10g022010 Solanum pennellii HOM05D005465 ORTHO05D006612 5.8e-33 144.1 97 76.3
SGA_v2.0_scaffold4G02379 Striga asiatica HOM05D005465 ORTHO05D006612 5.8e-33 144.1 127 60.6
PGSC0003DMG400001360 Solanum tuberosum HOM05D005465 ORTHO05D006612 1.3e-32 142.9 127 57.5
SGA_v2.0_scaffold52G19131 Striga asiatica HOM05D005465 ORTHO05D006612 2.2e-32 142.1 127 58.3
Sopen02g033620 Solanum pennellii HOM05D005465 ORTHO05D006612 6.4e-32 140.6 127 55.9
Actinidia26253 Actinidia chinensis HOM05D005465 ORTHO05D006612 8.4e-32 140.2 127 57.5
Solyc02g088930.4 Solanum lycopersicum HOM05D005465 ORTHO05D006612 3.5e-30 134.8 124 54.0
CSS0002198 Camellia sinensis var. sinensis HOM05D005465 ORTHO05D006612 7.9e-30 133.7 127 54.3
Hma1.2p1_0481F.1_g162260 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 6.7e-29 130.6 124 54.0
Hma1.2p1_0481F.1_g162270 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 6.7e-29 130.6 124 54.0
PGSC0003DMG400035500 Solanum tuberosum HOM05D005465 ORTHO05D006612 6.7e-29 130.6 122 55.7
Gohir.D03G097000 Gossypium hirsutum HOM05D005465 ORTHO05D006612 1.1e-28 129.8 126 53.2
Gorai.003G101800 Gossypium raimondii HOM05D005465 ORTHO05D006612 1.1e-28 129.8 126 53.2
PGR044G0931 Punica granatum HOM05D005465 ORTHO05D006612 1.5e-28 129.4 128 55.5
Gohir.A03G070600 Gossypium hirsutum HOM05D005465 ORTHO05D006612 2.5e-28 128.6 126 52.4
COL.COLO4_24335 Corchorus olitorius HOM05D005465 ORTHO05D006612 3.3e-28 128.3 126 51.6
Manes.06G083500 Manihot esculenta HOM05D005465 ORTHO05D006612 3.3e-28 128.3 125 55.2
Duzib205G0879 Durio zibethinus HOM05D005465 ORTHO05D006612 5.6e-28 127.5 126 50.8
Peaxi162Scf00166g00046 Petunia axillaris HOM05D005465 ORTHO05D006612 5.6e-28 127.5 129 50.4
Rhsim10G0050100 Rhododendron simsii HOM05D005465 ORTHO05D006612 5.6e-28 127.5 122 55.7
unitig_899.g15102 Utricularia gibba HOM05D005465 ORTHO05D006612 7.4e-28 127.1 120 54.2
Duzib084G0509 Durio zibethinus HOM05D005465 ORTHO05D006612 9.6e-28 126.7 126 51.6
Thecc.03G103400 Theobroma cacao HOM05D005465 ORTHO05D006612 9.6e-28 126.7 122 53.3
ClCG04G011730 Citrullus lanatus HOM05D005465 ORTHO05D006612 2.1e-27 125.6 127 54.3
Nn3g17466 Nelumbo nucifera HOM05D005465 ORTHO05D006612 2.1e-27 125.6 126 54.0
Rhsim10G0048500 Rhododendron simsii HOM05D005465 ORTHO05D006612 2.8e-27 125.2 127 53.5
Migut.H00618 Erythranthe guttata HOM05D005465 ORTHO05D006612 3.7e-27 124.8 127 52.8
MELO3C002037.2 Cucumis melo HOM05D005465 ORTHO05D006612 4.8e-27 124.4 127 53.5
Lsat_1_v5_gn_4_171900 Lactuca sativa HOM05D005465 ORTHO05D006612 6.2e-27 124.0 127 51.2
Nn4g23446 Nelumbo nucifera HOM05D005465 ORTHO05D006612 6.2e-27 124.0 126 52.4
Rhsim08G0075200 Rhododendron simsii HOM05D005465 ORTHO05D006612 6.2e-27 124.0 123 52.0
TAR622G0582 Trochodendron aralioides HOM05D005465 ORTHO05D006612 8.1e-27 123.6 124 51.6
ECA232G0503 Erigeron canadensis HOM05D005465 ORTHO05D006612 1.4e-26 122.9 127 51.2
CsaV3_1G006060 Cucumis sativus L. HOM05D005465 ORTHO05D006612 2.4e-26 122.1 127 52.8
Gorai.006G268200 Gossypium raimondii HOM05D005465 ORTHO05D006612 3.1e-26 121.7 126 49.2
Rhsim10G0047800 Rhododendron simsii HOM05D005465 ORTHO05D006612 3.1e-26 121.7 127 52.0
Cc07_g04290 Coffea canephora HOM05D005465 ORTHO05D006612 1.2e-25 119.8 125 50.4
Sc14g0006350 Simmondsia chinensis HOM05D005465 ORTHO05D006612 2.0e-25 119.0 120 54.2
DCAR_011037 Daucus carota HOM05D005465 ORTHO05D006612 2.6e-25 118.6 125 52.0
Cpa.g.sc746.2 Carica papaya HOM05D005465 ORTHO05D006612 3.4e-25 118.2 121 53.7
Aqoxy3G03677 Aquilegia oxysepala HOM05D005465 ORTHO05D006612 5.8e-25 117.5 125 48.0
CiPaw.11G054700 Carya illinoinensis HOM05D005465 ORTHO05D006612 5.8e-25 117.5 125 51.2
TWI81G0357 Tripterygium wilfordii HOM05D005465 ORTHO05D006612 7.6e-25 117.1 127 49.6
Ciclev10022497m.g Citrus clementina HOM05D005465 ORTHO05D006612 1.3e-24 116.3 125 49.6
TAR371G0638 Trochodendron aralioides HOM05D005465 ORTHO05D006612 1.7e-24 115.9 124 50.0
Atru.chr9.555 Acer truncatum HOM05D005465 ORTHO05D006612 2.2e-24 115.5 124 50.0
AL6G18430 Arabidopsis lyrata HOM05D005465 ORTHO05D006612 2.2e-24 115.5 128 46.1
BcaB01g05639 Brassica carinata HOM05D005465 ORTHO05D006612 2.9e-24 115.2 126 46.8
Ah.10g032300 Amaranthus hybridus HOM05D005465 ORTHO05D006612 3.8e-24 114.8 127 50.4
A03p03570 Brassica napus HOM05D005465 ORTHO05D006612 3.8e-24 114.8 123 47.2
BraA03t09707Z Brassica rapa HOM05D005465 ORTHO05D006612 3.8e-24 114.8 123 47.2
Rhsim10G0048300 Rhododendron simsii HOM05D005465 ORTHO05D006612 4.9e-24 114.4 104 54.8
Cfa019348 Carpinus fangiana HOM05D005465 ORTHO05D006612 6.4e-24 114.0 125 48.8
Haze_07739 Corylus avellana HOM05D005465 ORTHO05D006612 6.4e-24 114.0 125 48.8
Sed0023287 Sechium edule HOM05D005465 ORTHO05D006612 8.4e-24 113.6 127 48.0
VMungo1215G2862 Vigna mungo HOM05D005465 ORTHO05D006612 8.4e-24 113.6 123 48.8
Carub.0006s0695 Capsella rubella HOM05D005465 ORTHO05D006612 1.1e-23 113.2 127 45.7
RcHm_v2.0_Chr7g0183221 Rosa chinensis HOM05D005465 ORTHO05D006612 1.1e-23 113.2 124 49.2
A10p28580 Brassica napus HOM05D005465 ORTHO05D006612 1.4e-23 112.8 125 45.6
BolC9t59633H Brassica oleracea HOM05D005465 ORTHO05D006612 1.4e-23 112.8 125 45.6
CARHR205120 Cardamine hirsuta HOM05D005465 ORTHO05D006612 1.4e-23 112.8 126 44.4
BcaB08g37294 Brassica carinata HOM05D005465 ORTHO05D006612 1.9e-23 112.5 125 45.6
C09p68870 Brassica napus HOM05D005465 ORTHO05D006612 1.9e-23 112.5 125 45.6
Prupe.5G206300 Prunus persica HOM05D005465 ORTHO05D006612 1.9e-23 112.5 128 47.7
AT5G08060 Arabidopsis thaliana HOM05D005465 ORTHO05D006612 2.4e-23 112.1 128 43.8
FvH4_5g13720 Fragaria vesca HOM05D005465 ORTHO05D006612 2.4e-23 112.1 127 48.0
PSO063G4354 Papaver somniferum HOM05D005465 ORTHO05D006612 2.4e-23 112.1 124 48.4
arahy.Tifrunner.gnm1.ann1.13IMLW Arachis hypogaea HOM05D005465 ORTHO05D006612 3.2e-23 111.7 125 48.8
Thhalv10015010m.g Eutrema salsugineum HOM05D005465 ORTHO05D006612 3.2e-23 111.7 126 45.2
BraA10t44907Z Brassica rapa HOM05D005465 ORTHO05D006612 4.2e-23 111.3 125 44.8
THA.LOC104801135 Tarenaya hassleriana HOM05D005465 ORTHO05D006612 4.2e-23 111.3 125 46.4
FAN18G4042 Fragaria x ananassa HOM05D005465 ORTHO05D006612 5.5e-23 110.9 124 47.6
BolC3t12939H Brassica oleracea HOM05D005465 ORTHO05D006612 7.1e-23 110.5 126 46.8
AUR62018194 Chenopodium quinoa HOM05D005465 ORTHO05D006612 7.1e-23 110.5 125 46.4
AUR62038681 Chenopodium quinoa HOM05D005465 ORTHO05D006612 7.1e-23 110.5 125 46.4
PSO782G3842 Papaver somniferum HOM05D005465 ORTHO05D006612 9.3e-23 110.2 124 46.8
Sp6g34890 Schrenkiella parvula HOM05D005465 ORTHO05D006612 1.2e-22 109.8 126 45.2
Glyma.17G079700 Glycine max HOM05D005465 ORTHO05D006612 1.6e-22 109.4 123 46.3
FAN13G0353 Fragaria x ananassa HOM05D005465 ORTHO05D006612 2.7e-22 108.6 124 46.8
Glyma.05G020100 Glycine max HOM05D005465 ORTHO05D006612 4.6e-22 107.8 123 46.3
Eucgr.K02534 Eucalyptus grandis HOM05D005465 ORTHO05D006612 1.0e-21 106.7 121 47.9
MD06G1226100 Malus domestica HOM05D005465 ORTHO05D006612 1.3e-21 106.3 122 49.2
Potri.004G123700 Populus trichocarpa HOM05D005465 ORTHO05D006612 1.8e-21 105.9 126 47.6
Zm00001eb370380 Zea mays HOM05D005465 ORTHO05D006612 1.8e-21 105.9 130 46.9
Oeu062167.1 Olea europaea HOM05D005465 ORTHO05D006612 2.3e-21 105.5 127 48.0
Lalb_Chr13g0302801 Lupinus albus HOM05D005465 ORTHO05D006612 3.9e-21 104.8 123 46.3
Zm00001eb152340 Zea mays HOM05D005465 ORTHO05D006612 3.9e-21 104.8 128 46.9
Os01g0763300 Oryza sativa ssp. japonica HOM05D005465 ORTHO05D006612 5.1e-21 104.4 129 45.0
Phvul.003G183800 Phaseolus vulgaris HOM05D005465 ORTHO05D006612 5.1e-21 104.4 123 44.7
BcaB05g21584 Brassica carinata HOM05D005465 ORTHO05D006612 8.7e-21 103.6 127 43.3
BraA02t04941Z Brassica rapa HOM05D005465 ORTHO05D006612 8.7e-21 103.6 124 44.4
MD14G1213000 Malus domestica HOM05D005465 ORTHO05D006612 8.7e-21 103.6 122 47.5
Psat4g047600 Pisum sativum HOM05D005465 ORTHO05D006612 1.1e-20 103.2 127 45.7
Aa31LG3G18480 Aethionema arabicum HOM05D005465 ORTHO05D006612 1.9e-20 102.4 124 45.2
EL10Ac2g03144 Beta vulgaris HOM05D005465 ORTHO05D006612 2.5e-20 102.1 127 44.1
QL10p019840 Quercus lobata HOM05D005465 ORTHO05D006612 2.5e-20 102.1 120 43.3
SHI17457 Sapria himalayana HOM05D005465 ORTHO05D006612 2.5e-20 102.1 123 43.9
Peaxi162Scf00991g00114 Petunia axillaris HOM05D005465 ORTHO05D006612 4.3e-20 101.3 94 59.6
TPR.G2036 Trifolium pratense HOM05D005465 ORTHO05D006612 1.3e-19 99.8 127 42.5
Medtr4g109650 Medicago truncatula HOM05D005465 ORTHO05D006612 2.8e-19 98.6 127 42.5
Dinv34936 Davidia involucrata HOM05D005465 ORTHO05D006612 4.8e-19 97.8 72 63.9
Gohir.D09G244200 Gossypium hirsutum HOM05D005465 ORTHO05D006612 6.2e-19 97.4 126 43.7
MBI16_g10835_MAGBIO Magnolia biondii HOM05D005465 ORTHO05D006612 6.2e-19 97.4 122 45.1
Hma1.2p1_0029F.1_g018040 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 1.1e-18 96.7 72 65.3
Ca_21764_v3 Cicer arietinum L. HOM05D005465 ORTHO05D006612 1.8e-18 95.9 127 43.3
Actinidia17587 Actinidia chinensis HOM05D005465 ORTHO05D006612 2.4e-18 95.5 67 64.2
Lj4g0014841 Lotus japonicus HOM05D005465 ORTHO05D006612 3.1e-18 95.1 125 44.8
Sabra04G0090300 Salix brachista HOM05D005465 ORTHO05D006612 2.0e-17 92.4 126 43.7
DCAR_025436 Daucus carota HOM05D005465 ORTHO05D006612 5.8e-17 90.9 126 42.1
BcaB08g37291 Brassica carinata HOM05D005465 ORTHO05D006612 4.9e-16 87.8 62 59.7
Gohir.A09G243500 Gossypium hirsutum HOM05D005465 ORTHO05D006612 1.1e-15 86.7 71 53.5
FAN08G0639 Fragaria x ananassa HOM05D005465 ORTHO05D006612 1.2e-14 83.2 61 60.7
TAR622G1303 Trochodendron aralioides HOM05D005465 ORTHO05D006612 4.6e-14 81.3 63 58.7
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 1.3e-13 79.7 72 52.8
EL10Ac5g12104 Beta vulgaris HOM05D005465 ORTHO05D006612 6.9e-10 67.4 70 50.0
EL10Ac5g11896 Beta vulgaris HOM05D005465 ORTHO05D006612 5.9e-09 64.3 100 39.0
SMO263G0026 Selaginella moellendorffii HOM05D005465 ORTHO05D006612 7.6e-09 63.9 57 52.6
Mapoly0019s0055 Marchantia polymorpha HOM05D005465 ORTHO05D006612 5.0e-08 61.2 82 35.4
SEGI_27681 Sequoiadendron giganteum HOM05D005465 ORTHO05D006612 6.5e-08 60.8 77 44.2
SEGI_31914 Sequoiadendron giganteum HOM05D005465 ORTHO05D006612 1.1e-07 60.1 64 46.9
SGA_v2.0_scaffold187G40263 Striga asiatica HOM05D005465 ORTHO05D006612 1.2e-06 56.6 97 38.1
Sopen02g033680 Solanum pennellii HOM05D005465 ORTHO05D006612 7.9e-06 53.9 59 50.8


User provided reference genes

Program Settings