Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g014700 Solanum pennellii HOM05D005432 ORTHO05D004599 6.1e-112 407.5 210 100.0
Solyc02g064570.2 Solanum lycopersicum HOM05D005432 ORTHO05D004599 7.7e-99 364.0 210 91.4
PGSC0003DMG400003320 Solanum tuberosum HOM05D005432 ORTHO05D004599 1.3e-82 310.1 211 82.9
CAN.G775.5 Capsicum annuum HOM05D005432 ORTHO05D004599 2.7e-51 206.1 196 63.8
Peaxi162Scf00449g00414 Petunia axillaris HOM05D005432 ORTHO05D004599 5.8e-38 161.8 207 56.0
Peaxi162Scf00500g00034 Petunia axillaris HOM05D005432 ORTHO05D004599 2.0e-30 136.7 207 44.9
Nitab4.5_0000680g0130 Nicotiana tabacum HOM05D005432 ORTHO05D004599 3.4e-30 136.0 220 46.8
Nitab4.5_0008385g0020 Nicotiana tabacum HOM05D005432 ORTHO05D004599 7.1e-28 128.3 229 42.8
Nitab4.5_0008385g0010 Nicotiana tabacum HOM05D005432 ORTHO05D004599 9.3e-28 127.9 218 47.2
PGSC0003DMG400012977 Solanum tuberosum HOM05D005432 ORTHO05D004599 2.3e-26 123.2 219 44.3
PGSC0003DMG400002732 Solanum tuberosum HOM05D005432 ORTHO05D004599 2.2e-24 116.7 195 43.1
Nitab4.5_0000680g0150 Nicotiana tabacum HOM05D005432 ORTHO05D004599 3.1e-23 112.8 171 47.4
Solyc09g008750.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 2.0e-22 110.2 223 41.7
Solyc09g008760.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 3.4e-22 109.4 239 38.9
CAN.G1830.1 Capsicum annuum HOM05D005432 ORTHO05D004599 1.0e-21 107.8 174 46.0
Nitab4.5_0016059g0010 Nicotiana tabacum HOM05D005432 ORTHO05D004599 1.0e-21 107.8 135 57.8
PGSC0003DMG400012978 Solanum tuberosum HOM05D005432 ORTHO05D004599 2.2e-21 106.7 181 45.3
Solyc09g008740.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 8.5e-21 104.8 177 42.9
Nitab4.5_0000036g0120 Nicotiana tabacum HOM05D005432 ORTHO05D004599 1.4e-20 104.0 142 52.8
Sopen09g003530 Solanum pennellii HOM05D005432 ORTHO05D004599 5.5e-20 102.1 186 41.9
Sopen09g003550 Solanum pennellii HOM05D005432 ORTHO05D004599 5.1e-18 95.5 188 38.8
Sopen09g003540 Solanum pennellii HOM05D005432 ORTHO05D004599 2.0e-17 93.6 176 42.6
CAN.G1830.3 Capsicum annuum HOM05D005432 ORTHO05D004599 4.3e-17 92.4 200 39.0
CAN.G1830.2 Capsicum annuum HOM05D005432 ORTHO05D004599 8.2e-16 88.2 270 33.0
QL06p039087 Quercus lobata HOM05D005432 ORTHO05D004599 8.2e-16 88.2 214 38.8
TAR628G1364 Trochodendron aralioides HOM05D005432 ORTHO05D004599 5.3e-15 85.5 202 39.1
Gorai.007G225500 Gossypium raimondii HOM05D005432 ORTHO05D004599 2.0e-14 83.6 180 37.2
TAR625G0570 Trochodendron aralioides HOM05D005432 ORTHO05D004599 7.7e-14 81.6 183 35.0
Gohir.D11G210200 Gossypium hirsutum HOM05D005432 ORTHO05D004599 1.0e-13 81.3 203 36.0
Cc07_g07280 Coffea canephora HOM05D005432 ORTHO05D004599 1.3e-13 80.9 237 37.6
Actinidia11967 Actinidia chinensis HOM05D005432 ORTHO05D004599 1.7e-13 80.5 182 39.0
SalBow5G2133 Salvia bowleyana HOM05D005432 ORTHO05D004599 2.2e-13 80.1 220 37.3
Thecc.01G075000 Theobroma cacao HOM05D005432 ORTHO05D004599 3.8e-13 79.3 206 36.9
Gohir.A11G213000 Gossypium hirsutum HOM05D005432 ORTHO05D004599 8.5e-13 78.2 179 35.2
Sabra14G0006100 Salix brachista HOM05D005432 ORTHO05D004599 1.9e-12 77.0 179 37.4
Sabra07G0004500 Salix brachista HOM05D005432 ORTHO05D004599 2.5e-12 76.6 216 35.2
TAR376G0425 Trochodendron aralioides HOM05D005432 ORTHO05D004599 4.2e-12 75.9 210 36.7
Potri.014G006400 Populus trichocarpa HOM05D005432 ORTHO05D004599 7.2e-12 75.1 217 36.4
Potri.007G006200 Populus trichocarpa HOM05D005432 ORTHO05D004599 9.4e-12 74.7 226 36.7
Duzib187G0823 Durio zibethinus HOM05D005432 ORTHO05D004599 1.6e-11 73.9 223 36.3
Duzib147G0737 Durio zibethinus HOM05D005432 ORTHO05D004599 2.7e-11 73.2 197 35.0
Rhsim10G0095000 Rhododendron simsii HOM05D005432 ORTHO05D004599 2.7e-11 73.2 192 34.9
Ciclev10026545m.g Citrus clementina HOM05D005432 ORTHO05D004599 4.7e-11 72.4 178 35.4
TAR381G0486 Trochodendron aralioides HOM05D005432 ORTHO05D004599 6.1e-11 72.0 203 36.0
ECA232G0649 Erigeron canadensis HOM05D005432 ORTHO05D004599 7.9e-11 71.6 197 33.0
COL.COLO4_11602 Corchorus olitorius HOM05D005432 ORTHO05D004599 1.0e-10 71.2 154 35.1
Dinv23035 Davidia involucrata HOM05D005432 ORTHO05D004599 1.0e-10 71.2 190 34.2
Gorai.008G084600 Gossypium raimondii HOM05D005432 ORTHO05D004599 1.4e-10 70.9 172 33.7
CANSAT01G2351 Cannabis sativa HOM05D005432 ORTHO05D004599 3.0e-10 69.7 200 35.0
Gohir.D12G076200 Gossypium hirsutum HOM05D005432 ORTHO05D004599 5.1e-10 68.9 181 31.5
Lsat_1_v5_gn_4_160141 Lactuca sativa HOM05D005432 ORTHO05D004599 5.1e-10 68.9 212 32.1
SGA_v2.0_scaffold15G07481 Striga asiatica HOM05D005432 ORTHO05D004599 6.7e-10 68.6 203 32.5
Gohir.A12G078000 Gossypium hirsutum HOM05D005432 ORTHO05D004599 8.8e-10 68.2 208 32.7
Lj4g0003965 Lotus japonicus HOM05D005432 ORTHO05D004599 8.8e-10 68.2 162 35.8
Migut.L00424 Erythranthe guttata HOM05D005432 ORTHO05D004599 1.1e-09 67.8 218 30.3
MD02G1188600 Malus domestica HOM05D005432 ORTHO05D004599 1.5e-09 67.4 205 33.7
ECA232G3846 Erigeron canadensis HOM05D005432 ORTHO05D004599 2.0e-09 67.0 214 32.7
TPR.G24244 Trifolium pratense HOM05D005432 ORTHO05D004599 3.3e-09 66.2 86 50.0
TWI77G0559 Tripterygium wilfordii HOM05D005432 ORTHO05D004599 3.3e-09 66.2 170 34.1
PGR102G0812 Punica granatum HOM05D005432 ORTHO05D004599 5.7e-09 65.5 214 36.0
VMungo0251G2573 Vigna mungo HOM05D005432 ORTHO05D004599 5.7e-09 65.5 85 47.1
Rhsim08G0092400 Rhododendron simsii HOM05D005432 ORTHO05D004599 9.7e-09 64.7 199 33.7
Glyma.05G107500 Glycine max HOM05D005432 ORTHO05D004599 1.7e-08 63.9 136 36.8
CiPaw.01G002700 Carya illinoinensis HOM05D005432 ORTHO05D004599 2.2e-08 63.5 208 33.2
DCAR_010807 Daucus carota HOM05D005432 ORTHO05D004599 2.2e-08 63.5 138 37.0
Manes.12G116300 Manihot esculenta HOM05D005432 ORTHO05D004599 3.7e-08 62.8 177 33.9
Duzib264G0647 Durio zibethinus HOM05D005432 ORTHO05D004599 4.8e-08 62.4 89 47.2
Medtr4g097350 Medicago truncatula HOM05D005432 ORTHO05D004599 4.8e-08 62.4 97 43.3
Oeu011980.1 Olea europaea HOM05D005432 ORTHO05D004599 4.8e-08 62.4 177 33.9
TPR.G24237 Trifolium pratense HOM05D005432 ORTHO05D004599 8.2e-08 61.6 134 37.3
FAN26G1008 Fragaria x ananassa HOM05D005432 ORTHO05D004599 1.1e-07 61.2 167 33.5
Lsat_1_v5_gn_4_160241 Lactuca sativa HOM05D005432 ORTHO05D004599 1.1e-07 61.2 182 30.8
MD02G1188700 Malus domestica HOM05D005432 ORTHO05D004599 1.1e-07 61.2 186 32.3
FvH4_1g18020 Fragaria vesca HOM05D005432 ORTHO05D004599 1.4e-07 60.8 195 31.8
FAN19G1119 Fragaria x ananassa HOM05D005432 ORTHO05D004599 1.4e-07 60.8 195 31.8
Phvul.003G233700 Phaseolus vulgaris HOM05D005432 ORTHO05D004599 1.4e-07 60.8 127 38.6
TPR.G24220 Trifolium pratense HOM05D005432 ORTHO05D004599 1.4e-07 60.8 99 41.4
TWI74G0597 Tripterygium wilfordii HOM05D005432 ORTHO05D004599 1.4e-07 60.8 96 40.6
Rhsim10G0095100 Rhododendron simsii HOM05D005432 ORTHO05D004599 2.4e-07 60.1 85 42.4
Migut.H00333 Erythranthe guttata HOM05D005432 ORTHO05D004599 3.1e-07 59.7 167 37.1
FAN23G2070 Fragaria x ananassa HOM05D005432 ORTHO05D004599 5.3e-07 58.9 195 32.3
Nn5g30641 Nelumbo nucifera HOM05D005432 ORTHO05D004599 5.3e-07 58.9 211 33.6
Ca_22097_v3 Cicer arietinum L. HOM05D005432 ORTHO05D004599 7.0e-07 58.5 136 36.8
Migut.L00423 Erythranthe guttata HOM05D005432 ORTHO05D004599 7.0e-07 58.5 168 31.0
RcHm_v2.0_Chr2g0108511 Rosa chinensis HOM05D005432 ORTHO05D004599 7.0e-07 58.5 167 31.1
VMungo1215G3148 Vigna mungo HOM05D005432 ORTHO05D004599 7.0e-07 58.5 91 39.6
Atru.chr3.1044 Acer truncatum HOM05D005432 ORTHO05D004599 9.1e-07 58.2 201 33.8
CsaV3_2G016320 Cucumis sativus L. HOM05D005432 ORTHO05D004599 1.2e-06 57.8 68 45.6
Manes.13G109800 Manihot esculenta HOM05D005432 ORTHO05D004599 1.2e-06 57.8 211 33.6
Prupe.6G218300 Prunus persica HOM05D005432 ORTHO05D004599 1.2e-06 57.8 212 32.1
ECA232G3481 Erigeron canadensis HOM05D005432 ORTHO05D004599 1.5e-06 57.4 176 30.1
Lsat_1_v5_gn_4_160361 Lactuca sativa HOM05D005432 ORTHO05D004599 2.0e-06 57.0 175 33.7
Medtr4g097280 Medicago truncatula HOM05D005432 ORTHO05D004599 2.0e-06 57.0 143 36.4
BraA08t34242Z Brassica rapa HOM05D009364 ORTHO05D004599 5.9e-06 55.5 82 37.8
Eucgr.H02318 Eucalyptus grandis HOM05D005432 ORTHO05D004599 5.9e-06 55.5 67 46.3


User provided reference genes

Program Settings