Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g013670 Solanum pennellii HOM05D004708 ORTHO05D005573 1.6e-92 342.8 178 100.0
Solyc02g062640.4 Solanum lycopersicum HOM05D004708 ORTHO05D005573 9.5e-90 333.6 179 98.3
PGSC0003DMG400015508 Solanum tuberosum HOM05D004708 ORTHO05D005573 4.4e-87 324.7 175 96.0
Nitab4.5_0000136g0310 Nicotiana tabacum HOM05D004708 ORTHO05D005573 5.6e-82 307.8 178 87.1
Peaxi162Scf00008g03516 Petunia axillaris HOM05D004708 ORTHO05D005573 3.6e-81 305.1 179 87.2
CAN.G111.48 Capsicum annuum HOM05D004708 ORTHO05D005573 2.3e-80 302.4 176 89.2
CAN.G1645.15 Capsicum annuum HOM05D004708 ORTHO05D005573 8.3e-78 293.9 175 89.1
Cc07_g09720 Coffea canephora HOM05D004708 ORTHO05D005573 1.3e-70 270.0 169 79.9
COL.COLO4_34048 Corchorus olitorius HOM05D004708 ORTHO05D005573 3.2e-69 265.4 174 78.2
HanXRQChr09g0261341 Helianthus annuus HOM05D004708 ORTHO05D005573 4.1e-69 265.0 172 77.9
Gohir.A09G170800 Gossypium hirsutum HOM05D004708 ORTHO05D005573 5.4e-69 264.6 167 80.2
Sc16g0002660 Simmondsia chinensis HOM05D004708 ORTHO05D005573 1.2e-68 263.5 169 78.7
QL06p046600 Quercus lobata HOM05D004708 ORTHO05D005573 2.1e-68 262.7 164 79.9
Thecc.03G010200 Theobroma cacao HOM05D004708 ORTHO05D005573 2.1e-68 262.7 174 75.9
vmacro17822 Vaccinium macrocarpon HOM05D004708 ORTHO05D005573 2.7e-68 262.3 168 78.0
Ciclev10026600m.g Citrus clementina HOM05D004708 ORTHO05D005573 3.5e-68 261.9 170 76.5
Hund16439 Selenicereus undatus HOM05D004708 ORTHO05D005573 3.5e-68 261.9 166 77.7
Atru.chr3.607 Acer truncatum HOM05D004708 ORTHO05D005573 6.0e-68 261.2 167 77.2
Actinidia19193 Actinidia chinensis HOM05D004708 ORTHO05D005573 6.0e-68 261.2 174 75.9
Gorai.006G188300 Gossypium raimondii HOM05D004708 ORTHO05D005573 6.0e-68 261.2 167 78.4
CSS0040556 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 7.8e-68 260.8 169 75.7
ECA232G2192 Erigeron canadensis HOM05D004708 ORTHO05D005573 1.7e-67 259.6 164 81.7
Gorai.008G067200 Gossypium raimondii HOM05D004708 ORTHO05D005573 3.9e-67 258.5 180 72.8
Aa31LG8G15760 Aethionema arabicum HOM05D004708 ORTHO05D005573 5.1e-67 258.1 167 76.6
AUR62004070 Chenopodium quinoa HOM05D004708 ORTHO05D005573 8.6e-67 257.3 170 77.1
Lsat_1_v5_gn_4_148240 Lactuca sativa HOM05D004708 ORTHO05D005573 8.6e-67 257.3 174 73.6
MD02G1144700 Malus domestica HOM05D004708 ORTHO05D005573 8.6e-67 257.3 170 75.9
Prupe.7G156900 Prunus persica HOM05D004708 ORTHO05D005573 8.6e-67 257.3 170 77.1
Rhsim08G0118600 Rhododendron simsii HOM05D004708 ORTHO05D005573 8.6e-67 257.3 168 76.8
Dinv13509 Davidia involucrata HOM05D004708 ORTHO05D005573 1.1e-66 256.9 169 76.3
CSS0030971 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 1.5e-66 256.5 174 74.1
Cpa.g.sc6.137 Carica papaya HOM05D004708 ORTHO05D005573 1.5e-66 256.5 176 73.3
MD15G1258400 Malus domestica HOM05D004708 ORTHO05D005573 1.5e-66 256.5 170 76.5
MSTRG.23511 Avicennia marina HOM05D004708 ORTHO05D005573 1.9e-66 256.1 162 77.8
GSVIVG01018936001 Vitis vinifera HOM05D004708 ORTHO05D005573 2.5e-66 255.8 166 75.3
GSVIVG01025946001 Vitis vinifera HOM05D004708 ORTHO05D005573 2.5e-66 255.8 168 73.8
Duzib084G0089 Durio zibethinus HOM05D004708 ORTHO05D005573 4.3e-66 255.0 169 75.7
TWI53G1618 Tripterygium wilfordii HOM05D004708 ORTHO05D005573 5.6e-66 254.6 171 73.7
EL10Ac6g15543 Beta vulgaris HOM05D004708 ORTHO05D005573 9.6e-66 253.8 175 76.6
Manes.01G136850 Manihot esculenta HOM05D004708 ORTHO05D005573 1.6e-65 253.1 164 75.6
CiPaw.01G043700 Carya illinoinensis HOM05D004708 ORTHO05D005573 6.2e-65 251.1 169 75.1
AT2G18250 Arabidopsis thaliana HOM05D004708 ORTHO05D005573 1.1e-64 250.4 157 77.7
Hma1.2p1_0224F.1_g094553 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 1.1e-64 250.4 168 73.8
Hund13990 Selenicereus undatus HOM05D004708 ORTHO05D005573 1.4e-64 250.0 172 71.5
Thecc.01G032800 Theobroma cacao HOM05D004708 ORTHO05D005573 1.4e-64 250.0 163 77.3
AUR62007583 Chenopodium quinoa HOM05D004708 ORTHO05D005573 2.4e-64 249.2 158 79.1
COL.COLO4_22050 Corchorus olitorius HOM05D004708 ORTHO05D005573 3.1e-64 248.8 183 72.7
Migut.H00962 Erythranthe guttata HOM05D004708 ORTHO05D005573 3.1e-64 248.8 173 74.0
Carub.0003s3243 Capsella rubella HOM05D004708 ORTHO05D005573 4.0e-64 248.4 167 74.9
ClCG05G006010 Citrullus lanatus HOM05D000319 ORTHO05D000903 4.0e-64 248.4 167 73.7
Potri.005G121200 Populus trichocarpa HOM05D004708 ORTHO05D005573 4.0e-64 248.4 179 70.9
AL3G51520 Arabidopsis lyrata HOM05D004708 ORTHO05D005573 5.2e-64 248.1 167 74.9
Manes.02G095600 Manihot esculenta HOM05D004708 ORTHO05D005573 6.9e-64 247.7 170 72.4
Duzib264G1087 Durio zibethinus HOM05D004708 ORTHO05D005573 2.0e-63 246.1 176 71.0
DCAR_032374 Daucus carota HOM05D004708 ORTHO05D005573 3.4e-63 245.4 173 71.7
FvH4_1g13011 Fragaria vesca HOM05D004708 ORTHO05D005573 4.4e-63 245.0 182 68.1
SalBow6G2211 Salvia bowleyana HOM05D004708 ORTHO05D005573 5.8e-63 244.6 166 72.3
CsaV3_3G014460 Cucumis sativus L. HOM05D004708 ORTHO05D005573 9.9e-63 243.8 168 73.2
Lj2g0001027 Lotus japonicus HOM05D002605 ORTHO05D002842 9.9e-63 243.8 178 70.8
BcaB07g31677 Brassica carinata HOM05D004708 ORTHO05D005573 1.3e-62 243.4 171 70.8
Aqoxy3G01739 Aquilegia oxysepala HOM05D004708 ORTHO05D005573 1.7e-62 243.0 162 73.5
PGR119G0658 Punica granatum HOM05D004708 ORTHO05D005573 1.7e-62 243.0 174 71.3
PSO764G0091 Papaver somniferum HOM05D004708 ORTHO05D005573 2.2e-62 242.7 160 75.6
RcHm_v2.0_Chr2g0101171 Rosa chinensis HOM05D004708 ORTHO05D005573 2.2e-62 242.7 165 73.3
unitig_21.g20250 Utricularia gibba HOM05D004708 ORTHO05D005573 2.2e-62 242.7 154 77.3
DCAR_023857 Daucus carota HOM05D004708 ORTHO05D005573 2.9e-62 242.3 157 74.5
Thhalv10022875m.g Eutrema salsugineum HOM05D004708 ORTHO05D005573 2.9e-62 242.3 157 75.2
BcaC04g22917 Brassica carinata HOM05D004708 ORTHO05D005573 3.8e-62 241.9 171 70.8
MELO3C006648.2 Cucumis melo HOM05D004708 ORTHO05D005573 4.9e-62 241.5 167 71.9
SGA_v2.0_scaffold258G45779 Striga asiatica HOM05D004708 ORTHO05D005573 4.9e-62 241.5 168 73.2
BolC9t54282H Brassica oleracea HOM05D004708 ORTHO05D005573 8.4e-62 240.7 171 70.2
Hma1.2p1_0789F.1_g218250 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 8.4e-62 240.7 174 71.3
Medtr5g020680 Medicago truncatula HOM05D004708 ORTHO05D005573 2.4e-61 239.2 173 69.9
CARHR108820 Cardamine hirsuta HOM05D004708 ORTHO05D005573 3.2e-61 238.8 167 71.3
Sp3g31670 Schrenkiella parvula HOM05D004708 ORTHO05D005573 3.2e-61 238.8 167 71.9
Lsat_1_v5_gn_2_77221 Lactuca sativa HOM05D004708 ORTHO05D005573 5.4e-61 238.0 155 77.4
A07p02450 Brassica napus HOM05D004708 ORTHO05D005573 9.3e-61 237.3 159 73.6
BraA07t28041Z Brassica rapa HOM05D004708 ORTHO05D005573 9.3e-61 237.3 159 73.6
VMungo1215G3002 Vigna mungo HOM05D004708 ORTHO05D005573 9.3e-61 237.3 182 65.9
Ca_24863_v3 Cicer arietinum L. HOM05D004708 ORTHO05D005573 1.2e-60 236.9 169 71.0
Zm00001eb231510 Zea mays HOM05D004708 ORTHO05D005573 1.2e-60 236.9 166 71.7
PSO339G0290 Papaver somniferum HOM05D004708 ORTHO05D005573 1.6e-60 236.5 166 72.9
Psat2g158360 Pisum sativum HOM05D004708 ORTHO05D005573 1.6e-60 236.5 173 68.2
Medtr8g073890 Medicago truncatula HOM05D004708 ORTHO05D005573 3.5e-60 235.3 156 75.0
BcaB03g16615 Brassica carinata HOM05D004708 ORTHO05D005573 4.6e-60 235.0 177 67.8
BcaC06g36391 Brassica carinata HOM05D004708 ORTHO05D005573 4.6e-60 235.0 171 69.6
arahy.Tifrunner.gnm1.ann1.CZ32YF Arachis hypogaea HOM05D004708 ORTHO05D005573 1.7e-59 233.0 178 67.4
Ca_21297_v3 Cicer arietinum L. HOM05D004708 ORTHO05D005573 2.3e-59 232.6 169 69.2
BolC7t40861H Brassica oleracea HOM05D004708 ORTHO05D005573 5.1e-59 231.5 171 69.0
Glyma.01G173050 Glycine max HOM05D004708 ORTHO05D005573 5.1e-59 231.5 166 69.9
Aqoxy5G01592 Aquilegia oxysepala HOM05D004708 ORTHO05D005573 6.6e-59 231.1 161 71.4
Lalb_Chr05g0212721 Lupinus albus HOM05D004708 ORTHO05D005573 6.6e-59 231.1 173 69.4
C07p04600 Brassica napus HOM05D004708 ORTHO05D005573 1.1e-58 230.3 171 68.4
TPR.G2405 Trifolium pratense HOM05D004708 ORTHO05D005573 1.5e-58 229.9 178 65.7
ATR0796G251 Amborella trichopoda HOM05D004708 ORTHO05D005573 1.9e-58 229.6 161 72.0
SEGI_37374 Sequoiadendron giganteum HOM05D004708 ORTHO05D005573 1.9e-58 229.6 163 71.8
arahy.Tifrunner.gnm1.ann1.Y7U3HW Arachis hypogaea HOM05D004708 ORTHO05D005573 3.3e-58 228.8 178 66.3
arahy.Tifrunner.gnm1.ann1.V6C6W3 Arachis hypogaea HOM05D004708 ORTHO05D005573 4.3e-58 228.4 178 66.9
Phvul.002G032200 Phaseolus vulgaris HOM05D004708 ORTHO05D005573 2.8e-57 225.7 171 66.1
THA.LOC104807464 Tarenaya hassleriana HOM05D004708 ORTHO05D005573 3.6e-57 225.3 191 61.3
ECA238G4849 Erigeron canadensis HOM05D004708 ORTHO05D005573 6.2e-57 224.6 155 72.9
MD15G1258500 Malus domestica HOM05D004708 ORTHO05D005573 2.4e-56 222.6 159 69.8
Gohir.A12G064100 Gossypium hirsutum HOM05D004708 ORTHO05D005573 5.3e-56 221.5 180 65.6
arahy.Tifrunner.gnm1.ann1.KFYL3R Arachis hypogaea HOM05D004708 ORTHO05D005573 9.0e-56 220.7 178 65.7
FAN25G0668 Fragaria x ananassa HOM05D004708 ORTHO05D005573 9.0e-56 220.7 167 65.9
Sabra05G0099900 Salix brachista HOM05D004708 ORTHO05D005573 1.2e-55 220.3 224 56.7
Os07g0179400 Oryza sativa ssp. japonica HOM05D004708 ORTHO05D005573 3.4e-55 218.8 154 70.1
TAR624G0473 Trochodendron aralioides HOM05D004708 ORTHO05D005573 3.4e-55 218.8 158 69.6
FAN19G0555 Fragaria x ananassa HOM05D004708 ORTHO05D005573 9.9e-55 217.2 215 56.3
Dinv39998 Davidia involucrata HOM05D004708 ORTHO05D005573 4.9e-54 214.9 171 68.4
FAN21G0333 Fragaria x ananassa HOM05D004708 ORTHO05D005573 4.2e-53 211.8 168 62.5
Hma1.2p1_1820F.1_g304110 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 5.4e-53 211.5 136 77.2
CDE12G0116 Ceratophyllum demersum HOM05D004708 ORTHO05D005573 7.1e-53 211.1 149 70.5
Gohir.D09G166500 Gossypium hirsutum HOM05D004708 ORTHO05D005573 2.7e-52 209.1 167 67.7
CDE01G0816 Ceratophyllum demersum HOM05D004708 ORTHO05D005573 7.9e-52 207.6 149 69.8
HPP92_014750 Vanilla planifolia HOM05D004708 ORTHO05D005573 3.0e-51 205.7 165 62.4
Glyma.02G276900 Glycine max HOM05D004708 ORTHO05D005573 5.6e-50 201.4 151 65.6
Nitab4.5_0009165g0010 Nicotiana tabacum HOM05D000001 ORTHO05D013582 4.8e-49 198.4 114 91.2
Peaxi162Scf00130g00618 Petunia axillaris HOM05D004708 ORTHO05D005573 2.4e-48 196.1 176 59.7
Pp3c18_16890 Physcomitrium patens HOM05D004708 ORTHO05D005573 6.9e-48 194.5 154 61.0
SMO357G0013 Selaginella moellendorffii HOM05D004708 ORTHO05D005573 7.6e-47 191.0 149 65.8
BcaC04g22919 Brassica carinata HOM05D004708 ORTHO05D005573 1.3e-46 190.3 199 54.3
SMO318G0001 Selaginella moellendorffii HOM05D004708 ORTHO05D005573 2.2e-46 189.5 165 60.6
A09p11790 Brassica napus HOM05D004708 ORTHO05D005573 3.2e-45 185.7 129 71.3
FvH4_3g26020 Fragaria vesca HOM05D004708 ORTHO05D005573 3.2e-45 185.7 138 63.8
C09p13900 Brassica napus HOM05D004708 ORTHO05D005573 7.1e-45 184.5 173 59.5
CARHR108850 Cardamine hirsuta HOM05D004708 ORTHO05D005573 7.1e-45 184.5 120 73.3
Mapoly0065s0018 Marchantia polymorpha HOM05D004708 ORTHO05D005573 1.9e-42 176.4 159 57.9
Gohir.D12G064000 Gossypium hirsutum HOM05D004708 ORTHO05D005573 5.6e-42 174.9 120 70.8
CSS0019358 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 8.2e-41 171.0 116 76.7
Lj2A454G55 Lonicera japonica HOM05D004708 ORTHO05D005573 8.2e-41 171.0 143 65.0
PSO731G0046 Papaver somniferum HOM05D004708 ORTHO05D005573 1.5e-39 166.8 111 76.6
Zm00001eb301320 Zea mays HOM05D004708 ORTHO05D005573 2.6e-39 166.0 160 57.5
FAN11G2897 Fragaria x ananassa HOM05D004708 ORTHO05D009899 1.1e-37 160.6 176 53.4
PSO384G2349 Papaver somniferum HOM05D004708 ORTHO05D005573 1.1e-37 160.6 166 55.4
CAN.G2875.1 Capsicum annuum HOM05D004708 ORTHO05D005573 2.5e-37 159.5 105 85.7
CBR_g4476 Chara braunii HOM05D003322 ORTHO05D004228 1.0e-35 154.1 151 51.7
Os02g0134000 Oryza sativa ssp. japonica HOM05D004708 ORTHO05D005573 8.7e-35 151.0 105 73.3
Nn7g38122 Nelumbo nucifera HOM05D004708 ORTHO05D005573 3.3e-34 149.1 98 70.4
BraA09t36827Z Brassica rapa HOM05D004708 ORTHO05D005573 2.6e-31 139.4 104 70.2
AagrBONN_evm.TU.Sc2ySwM_228.2017 Anthoceros agrestis HOM05D004708 ORTHO05D005573 5.5e-29 131.7 110 64.5
Actinidia33865 Actinidia chinensis HOM05D004708 ORTHO05D005573 1.6e-28 130.2 93 75.3
FAN26G2067 Fragaria x ananassa HOM05D004708 ORTHO05D005573 4.8e-25 118.6 84 65.5
Pp3c18_18790 Physcomitrium patens HOM05D004708 ORTHO05D005573 8.2e-25 117.9 154 43.5
CAN.G53.14 Capsicum annuum HOM05D004708 ORTHO05D005573 3.1e-24 115.9 61 88.5
arahy.Tifrunner.gnm1.ann1.W5EA8A Arachis hypogaea HOM05D004708 ORTHO05D005573 3.2e-21 105.9 96 62.5
Cre13.g590550 Chlamydomonas reinhardtii HOM05D004708 ORTHO05D005573 5.5e-21 105.1 175 35.4
HanXRQChr17g0534461 Helianthus annuus HOM05D004708 ORTHO05D005573 4.7e-20 102.1 67 70.1
CAN.G53.15 Capsicum annuum HOM05D004708 ORTHO05D005573 1.8e-19 100.1 63 87.3
AagrBONN_evm.TU.Sc2ySwM_368.1168 Anthoceros agrestis HOM05D004708 ORTHO05D005573 3.0e-19 99.4 69 73.9
C09p74780 Brassica napus HOM05D004708 ORTHO05D005573 1.1e-16 90.9 59 74.6
C09p74830 Brassica napus HOM05D004708 ORTHO05D005573 1.1e-16 90.9 59 74.6
SGA_v2.0_scaffold276G46612 Striga asiatica HOM05D004708 ORTHO05D005573 3.1e-16 89.4 112 52.7
MCO08G231 Micromonas commoda HOM05D004708 ORTHO05D005573 3.4e-15 85.9 151 37.1
BcaC06g36392 Brassica carinata HOM05D000492 ORTHO05D005571 1.0e-14 84.3 56 75.0
Cfa027114 Carpinus fangiana HOM05D004708 ORTHO05D005573 1.2e-12 77.4 197 28.9
Oeu044133.1 Olea europaea HOM05D004708 ORTHO05D005573 6.1e-12 75.1 45 77.8
PRCOL_00004729 Prasinoderma coloniale HOM05D004708 ORTHO05D005573 1.8e-11 73.6 153 33.3
Actinidia12710 Actinidia chinensis HOM05D004708 ORTHO05D005573 8.2e-09 64.7 48 64.6


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