Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g013030 Solanum pennellii HOM05D008149 ORTHO05D010130 3.7e-159 565.1 343 100.0
PGSC0003DMG400023892 Solanum tuberosum HOM05D008149 ORTHO05D010130 9.0e-129 464.2 344 86.6
Solyc02g062070.2 Solanum lycopersicum HOM05D008149 ORTHO05D010130 1.3e-106 390.6 250 96.0
PGSC0003DMG400023889 Solanum tuberosum HOM05D008149 ORTHO05D010130 2.3e-76 290.0 391 48.6
Sopen02g013040 Solanum pennellii HOM05D008149 ORTHO05D010130 4.0e-76 289.3 374 47.3
Sopen02g013010 Solanum pennellii HOM05D008149 ORTHO05D010130 4.1e-73 279.3 411 46.0
Solyc02g061900.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 3.2e-70 269.6 371 46.1
PGSC0003DMG400023888 Solanum tuberosum HOM05D008149 ORTHO05D010130 5.7e-67 258.8 400 46.0
Sopen02g012890 Solanum pennellii HOM05D008149 ORTHO05D010130 4.8e-66 255.8 540 36.5
PGSC0003DMG400035879 Solanum tuberosum HOM05D008149 ORTHO05D010130 1.0e-63 248.1 430 41.2
PGSC0003DMG400045200 Solanum tuberosum HOM05D008149 ORTHO05D010130 5.5e-62 242.3 352 47.2
PGSC0003DMG400037967 Solanum tuberosum HOM05D008149 ORTHO05D010130 8.3e-58 228.4 351 43.9
Solyc02g061910.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 7.0e-57 225.3 353 43.3
CAN.G158.3 Capsicum annuum HOM05D008149 ORTHO05D010130 5.2e-52 209.1 371 38.3
Nitab4.5_0001019g0100 Nicotiana tabacum HOM05D008149 ORTHO05D010130 1.3e-42 177.9 401 34.2
Peaxi162Scf00016g00168 Petunia axillaris HOM05D008149 ORTHO05D010130 3.0e-39 166.8 344 34.9
Solyc02g062060.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 3.0e-39 166.8 221 47.5
Solyc02g061870.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 3.6e-37 159.8 163 52.1
Sopen02g013020 Solanum pennellii HOM05D008149 ORTHO05D010130 6.2e-37 159.1 221 45.7
PGSC0003DMG400036456 Solanum tuberosum HOM05D008149 ORTHO05D010130 1.1e-36 158.3 170 51.8
Solyc02g062080.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 1.2e-35 154.8 353 35.7
Peaxi162Scf00650g00014 Petunia axillaris HOM05D008149 ORTHO05D010130 7.6e-35 152.1 364 40.4
Peaxi162Scf00493g00439 Petunia axillaris HOM05D008149 ORTHO05D010130 2.2e-34 150.6 364 41.8
Nitab4.5_0001907g0010 Nicotiana tabacum HOM05D008149 ORTHO05D010130 1.4e-33 147.9 375 32.8
PGSC0003DMG400023887 Solanum tuberosum HOM05D008149 ORTHO05D010130 4.6e-32 142.9 201 48.3
Solyc02g062090.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 8.6e-31 138.7 341 33.7
CAN.G308.65 Capsicum annuum HOM05D008149 ORTHO05D010130 2.2e-26 124.0 158 41.8
Peaxi162Scf00066g00145 Petunia axillaris HOM05D008149 ORTHO05D010130 3.8e-26 123.2 149 47.0
Nitab4.5_0009705g0040 Nicotiana tabacum HOM05D008149 ORTHO05D010130 3.2e-25 120.2 152 47.4
Peaxi162Scf00245g00112 Petunia axillaris HOM05D017006 ORTHO05D010130 3.2e-25 120.2 158 44.9
Peaxi162Scf01324g00211 Petunia axillaris HOM05D017006 ORTHO05D010130 9.3e-25 118.6 159 44.0
Peaxi162Scf01324g00212 Petunia axillaris HOM05D017006 ORTHO05D010130 9.3e-25 118.6 159 44.0
Peaxi162Scf01780g00003 Petunia axillaris HOM05D017006 ORTHO05D010130 9.3e-25 118.6 159 44.0
Nitab4.5_0013476g0020 Nicotiana tabacum HOM05D008149 ORTHO05D010130 1.6e-24 117.9 153 45.1
Nitab4.5_0001874g0070 Nicotiana tabacum HOM05D008149 ORTHO05D010130 1.0e-23 115.2 173 39.9
PGSC0003DMG400042894 Solanum tuberosum HOM05D008149 ORTHO05D010130 2.3e-23 114.0 185 38.9
Nitab4.5_0001896g0010 Nicotiana tabacum HOM05D008149 ORTHO05D010130 8.7e-23 112.1 150 42.0
Solyc04g025760.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 8.7e-23 112.1 152 41.4
Peaxi162Scf00245g01014 Petunia axillaris HOM05D017006 ORTHO05D010130 4.8e-21 106.3 202 35.6
CAN.G1485.2 Capsicum annuum HOM05D008149 ORTHO05D010130 2.4e-20 104.0 116 45.7
PGSC0003DMG400040065 Solanum tuberosum HOM05D008149 ORTHO05D010130 2.4e-20 104.0 163 36.8
PGSC0003DMG400042869 Solanum tuberosum HOM05D008149 ORTHO05D010130 2.4e-20 104.0 158 51.3
Nitab4.5_0010957g0020 Nicotiana tabacum HOM05D008149 ORTHO05D010130 4.0e-20 103.2 156 39.7
Solyc02g062210.3 Solanum lycopersicum HOM05D008149 ORTHO05D010130 4.0e-20 103.2 229 34.1
Nitab4.5_0000082g0040 Nicotiana tabacum HOM05D008149 ORTHO05D010130 5.3e-20 102.8 156 39.7
Peaxi162Scf00108g00028 Petunia axillaris HOM05D008149 ORTHO05D010130 2.0e-19 100.9 147 43.5
CAN.G569.40 Capsicum annuum HOM05D008149 ORTHO05D010130 1.7e-18 97.8 176 38.1
Nitab4.5_0000608g0100 Nicotiana tabacum HOM05D008149 ORTHO05D010130 3.8e-18 96.7 155 38.1
CAN.G641.1 Capsicum annuum HOM05D008149 ORTHO05D010130 1.1e-17 95.1 161 36.6
CAN.G641.16 Capsicum annuum HOM05D008149 ORTHO05D010130 2.4e-17 94.0 161 36.0
Nitab4.5_0003562g0020 Nicotiana tabacum HOM05D008149 ORTHO05D010130 2.4e-17 94.0 155 38.1
CAN.G1095.3 Capsicum annuum HOM05D000069 ORTHO05D010130 5.4e-17 92.8 160 35.6
PGSC0003DMG400008178 Solanum tuberosum HOM05D008149 ORTHO05D010130 1.5e-14 84.7 156 37.2
PGSC0003DMG400008147 Solanum tuberosum HOM05D008149 ORTHO05D010130 2.1e-13 80.9 157 38.2
Sopen02g012300 Solanum pennellii HOM05D010460 ORTHO05D010130 1.8e-12 77.8 159 33.3
Peaxi162Scf00245g00118 Petunia axillaris HOM05D008149 ORTHO05D010130 4.0e-12 76.6 104 43.3
Sopen00g013830 Solanum pennellii HOM05D008149 ORTHO05D010130 7.6e-11 72.4 147 33.3
PGSC0003DMG400008179 Solanum tuberosum HOM05D008149 ORTHO05D010130 1.7e-10 71.2 131 38.9
Peaxi162Scf00245g01210 Petunia axillaris HOM05D017006 ORTHO05D010130 2.2e-10 70.9 136 36.8
Nitab4.5_0003386g0050 Nicotiana tabacum HOM05D008050 ORTHO05D003796 1.1e-09 68.6 157 27.4
CAN.G1612.2 Capsicum annuum HOM05D008149 ORTHO05D010130 1.4e-09 68.2 137 32.1
Solyc07g062240.1 Solanum lycopersicum HOM05D007636 ORTHO05D000952 1.9e-09 67.8 183 29.0
CAN.G641.11 Capsicum annuum HOM05D008149 ORTHO05D010130 2.4e-09 67.4 156 32.7
Nitab4.5_0000499g0070 Nicotiana tabacum HOM05D008050 ORTHO05D003796 4.2e-09 66.6 155 27.1
Lj1A188T28 Lonicera japonica HOM05D000010 ORTHO05D000151 5.4e-09 66.2 188 30.9
Nitab4.5_0001745g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 9.3e-09 65.5 149 26.2
Nitab4.5_0008183g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 2.1e-08 64.3 157 26.8
Nitab4.5_0001670g0030 Nicotiana tabacum HOM05D008050 ORTHO05D003796 2.7e-08 63.9 157 26.1
Nitab4.5_0015616g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 2.7e-08 63.9 158 25.9
Peaxi162Scf00111g00145 Petunia axillaris HOM05D008050 ORTHO05D003796 3.5e-08 63.5 184 29.3
Nitab4.5_0010159g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 4.6e-08 63.2 156 26.9
Peaxi162Scf00397g00112 Petunia axillaris HOM05D009491 ORTHO05D003796 4.6e-08 63.2 205 22.9
Peaxi162Scf37870g00003 Petunia axillaris HOM05D009491 ORTHO05D003796 4.6e-08 63.2 205 22.9
Nitab4.5_0007586g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 6.0e-08 62.8 158 25.9
Ca_08836_v3 Cicer arietinum L. HOM05D000010 ORTHO05D000151 1.0e-07 62.0 216 25.0
Duzib150G0455 Durio zibethinus HOM05D000010 ORTHO05D000151 1.0e-07 62.0 173 30.1
Duzib168G0481 Durio zibethinus HOM05D000010 ORTHO05D000151 1.0e-07 62.0 178 30.3
Lj1g0010612 Lotus japonicus HOM05D000010 ORTHO05D000151 1.0e-07 62.0 190 25.8
Nitab4.5_0001745g0030 Nicotiana tabacum HOM05D008050 ORTHO05D003796 1.0e-07 62.0 200 22.5
Psat3g045040 Pisum sativum HOM05D000010 ORTHO05D000151 1.0e-07 62.0 190 27.9
Hma1.2p1_1030F.1_g249870 Hydrangea macrophylla HOM05D000010 ORTHO05D000151 2.3e-07 60.8 187 26.2
Peaxi162Scf00017g00243 Petunia axillaris HOM05D008050 ORTHO05D003796 2.3e-07 60.8 157 27.4
Manes.11G142800 Manihot esculenta HOM05D000010 ORTHO05D000151 3.0e-07 60.5 148 29.1
Nitab4.5_0001366g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 5.1e-07 59.7 191 26.2
Peaxi162Scf00397g00022 Petunia axillaris HOM05D008050 ORTHO05D003796 5.1e-07 59.7 207 23.7
Actinidia18621 Actinidia chinensis HOM05D007636 ORTHO05D000952 6.7e-07 59.3 166 28.9
Nitab4.5_0002160g0040 Nicotiana tabacum HOM05D009491 ORTHO05D003796 6.7e-07 59.3 161 30.4
Thecc.09G257900 Theobroma cacao HOM05D000010 ORTHO05D000151 6.7e-07 59.3 152 30.3
FAN21G3107 Fragaria x ananassa HOM05D002630 ORTHO05D000952 8.7e-07 58.9 158 32.9
Medtr7g100990 Medicago truncatula HOM05D000010 ORTHO05D000151 1.1e-06 58.5 176 26.7
Sopen07g030510 Solanum pennellii HOM05D002099 ORTHO05D002080 1.1e-06 58.5 161 29.2
SGA_v2.0_scaffold40G15410 Striga asiatica HOM05D007636 ORTHO05D003796 1.5e-06 58.2 174 26.4
Cpa.g.sc435.1 Carica papaya HOM05D000010 ORTHO05D000151 1.9e-06 57.8 150 28.7
Eucgr.B02485 Eucalyptus grandis HOM05D000010 ORTHO05D000151 1.9e-06 57.8 148 29.1
Actinidia18619 Actinidia chinensis HOM05D002630 ORTHO05D000952 3.3e-06 57.0 166 28.3
Nitab4.5_0002608g0030 Nicotiana tabacum HOM05D009491 ORTHO05D003796 3.3e-06 57.0 160 28.8
Ciclev10030252m.g Citrus clementina HOM05D000010 ORTHO05D000151 4.3e-06 56.6 152 30.3
COL.COLO4_35915 Corchorus olitorius HOM05D000010 ORTHO05D158817 4.3e-06 56.6 169 27.8
ECA233G4652 Erigeron canadensis HOM05D000010 ORTHO05D000151 4.3e-06 56.6 209 26.8
Nitab4.5_0003111g0070 Nicotiana tabacum HOM05D009491 ORTHO05D003796 4.3e-06 56.6 160 28.8
Nitab4.5_0009087g0010 Nicotiana tabacum HOM05D009491 ORTHO05D003796 4.3e-06 56.6 160 28.8
Nitab4.5_0009210g0020 Nicotiana tabacum HOM05D009491 ORTHO05D003796 4.3e-06 56.6 160 28.8
SGA_v2.0_scaffold18G08273 Striga asiatica HOM05D007636 ORTHO05D003796 4.3e-06 56.6 158 27.8
Nitab4.5_0023007g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 5.6e-06 56.2 179 22.9
Nitab4.5_0024412g0010 Nicotiana tabacum HOM05D009491 ORTHO05D003796 5.6e-06 56.2 145 29.0
Phvul.005G136400 Phaseolus vulgaris HOM05D000010 ORTHO05D000151 5.6e-06 56.2 148 29.1
TAR633G0201 Trochodendron aralioides HOM05D000010 ORTHO05D000151 5.6e-06 56.2 149 28.9
arahy.Tifrunner.gnm1.ann1.JUA047 Arachis hypogaea HOM05D000010 ORTHO05D000151 7.4e-06 55.8 175 27.4
arahy.Tifrunner.gnm1.ann1.TCTP66 Arachis hypogaea HOM05D000010 ORTHO05D000151 7.4e-06 55.8 182 27.5
MBI04_g17673_MAGBIO Magnolia biondii HOM05D000010 ORTHO05D000151 7.4e-06 55.8 231 27.3
Nitab4.5_0022592g0010 Nicotiana tabacum HOM05D009491 ORTHO05D003796 7.4e-06 55.8 161 31.1
VMungo1080G0799 Vigna mungo HOM05D000010 ORTHO05D000151 9.6e-06 55.5 148 29.1


User provided reference genes

Program Settings