Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g013010 Solanum pennellii HOM05D008149 ORTHO05D010130 1.2e-233 812.8 406 100.0
Sopen02g012890 Solanum pennellii HOM05D008149 ORTHO05D010130 2.1e-185 652.5 519 69.2
PGSC0003DMG400023888 Solanum tuberosum HOM05D008149 ORTHO05D010130 3.3e-122 442.6 329 76.6
PGSC0003DMG400035879 Solanum tuberosum HOM05D008149 ORTHO05D010130 1.6e-113 413.7 359 67.4
Sopen02g013040 Solanum pennellii HOM05D008149 ORTHO05D010130 6.3e-113 411.8 407 60.4
PGSC0003DMG400023889 Solanum tuberosum HOM05D008149 ORTHO05D010130 1.0e-110 404.4 331 71.0
Solyc02g061900.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 8.2e-105 384.8 315 68.3
PGSC0003DMG400037967 Solanum tuberosum HOM05D008149 ORTHO05D010130 1.8e-88 330.5 313 62.3
PGSC0003DMG400045200 Solanum tuberosum HOM05D008149 ORTHO05D010130 8.8e-83 311.6 313 61.3
Solyc02g061910.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 2.6e-82 310.1 311 59.5
PGSC0003DMG400023892 Solanum tuberosum HOM05D008149 ORTHO05D010130 9.8e-74 281.6 411 47.7
Sopen02g013030 Solanum pennellii HOM05D008149 ORTHO05D010130 2.7e-71 273.5 411 46.0
Solyc02g062080.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 8.3e-57 225.3 309 48.9
CAN.G158.3 Capsicum annuum HOM05D008149 ORTHO05D010130 1.9e-53 214.2 339 43.4
Nitab4.5_0001019g0100 Nicotiana tabacum HOM05D008149 ORTHO05D010130 1.9e-45 187.6 420 36.9
Solyc02g062070.2 Solanum lycopersicum HOM05D008149 ORTHO05D010130 6.2e-44 182.6 317 42.6
Solyc02g062090.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 9.2e-40 168.7 310 40.3
Nitab4.5_0001907g0010 Nicotiana tabacum HOM05D008149 ORTHO05D010130 5.1e-38 162.9 425 36.2
PGSC0003DMG400036456 Solanum tuberosum HOM05D008149 ORTHO05D010130 6.6e-38 162.5 183 53.0
Solyc02g062060.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 2.1e-36 157.5 157 56.1
Solyc02g061870.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 4.7e-36 156.4 145 57.2
Sopen02g013020 Solanum pennellii HOM05D008149 ORTHO05D010130 1.4e-35 154.8 157 55.4
Peaxi162Scf00650g00014 Petunia axillaris HOM05D008149 ORTHO05D010130 1.3e-33 148.3 335 37.3
Peaxi162Scf00493g00439 Petunia axillaris HOM05D008149 ORTHO05D010130 3.8e-33 146.7 521 29.6
Peaxi162Scf00016g00168 Petunia axillaris HOM05D008149 ORTHO05D010130 1.7e-30 137.9 312 35.3
CAN.G308.65 Capsicum annuum HOM05D008149 ORTHO05D010130 7.6e-26 122.5 152 47.4
CAN.G1485.2 Capsicum annuum HOM05D008149 ORTHO05D010130 6.4e-25 119.4 116 56.9
Nitab4.5_0009705g0040 Nicotiana tabacum HOM05D008149 ORTHO05D010130 1.9e-24 117.9 136 50.7
Solyc04g025760.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 7.1e-24 115.9 154 45.5
PGSC0003DMG400042869 Solanum tuberosum HOM05D008149 ORTHO05D010130 9.3e-24 115.5 112 59.8
Peaxi162Scf00066g00145 Petunia axillaris HOM05D008149 ORTHO05D010130 1.2e-23 115.2 189 41.8
Nitab4.5_0013476g0020 Nicotiana tabacum HOM05D008149 ORTHO05D010130 2.1e-23 114.4 137 48.9
PGSC0003DMG400040065 Solanum tuberosum HOM05D008149 ORTHO05D010130 8.7e-22 109.0 142 45.1
Nitab4.5_0001874g0070 Nicotiana tabacum HOM05D008149 ORTHO05D010130 3.3e-21 107.1 237 35.9
CAN.G641.1 Capsicum annuum HOM05D008149 ORTHO05D010130 5.6e-21 106.3 162 42.6
CAN.G641.16 Capsicum annuum HOM05D008149 ORTHO05D010130 5.6e-21 106.3 162 42.6
Nitab4.5_0000608g0100 Nicotiana tabacum HOM05D008149 ORTHO05D010130 9.6e-21 105.5 277 33.6
PGSC0003DMG400042894 Solanum tuberosum HOM05D008149 ORTHO05D010130 9.6e-21 105.5 186 41.4
Nitab4.5_0001896g0010 Nicotiana tabacum HOM05D008149 ORTHO05D010130 4.8e-20 103.2 161 42.9
Nitab4.5_0010957g0020 Nicotiana tabacum HOM05D008149 ORTHO05D010130 4.8e-20 103.2 240 35.0
Nitab4.5_0000082g0040 Nicotiana tabacum HOM05D008149 ORTHO05D010130 6.9e-19 99.4 240 34.6
Nitab4.5_0003562g0020 Nicotiana tabacum HOM05D008149 ORTHO05D010130 1.2e-18 98.6 167 40.7
Peaxi162Scf00245g00112 Petunia axillaris HOM05D017006 ORTHO05D010130 1.5e-18 98.2 184 37.5
CAN.G1095.3 Capsicum annuum HOM05D000069 ORTHO05D010130 4.5e-18 96.7 162 40.1
Peaxi162Scf01324g00211 Petunia axillaris HOM05D017006 ORTHO05D010130 5.8e-18 96.3 170 40.0
Peaxi162Scf01324g00212 Petunia axillaris HOM05D017006 ORTHO05D010130 5.8e-18 96.3 170 40.0
Peaxi162Scf01780g00003 Petunia axillaris HOM05D017006 ORTHO05D010130 5.8e-18 96.3 170 40.0
CAN.G569.40 Capsicum annuum HOM05D008149 ORTHO05D010130 3.2e-16 90.5 149 42.3
CAN.G1612.2 Capsicum annuum HOM05D008149 ORTHO05D010130 1.2e-15 88.6 131 43.5
PGSC0003DMG400008178 Solanum tuberosum HOM05D008149 ORTHO05D010130 2.7e-15 87.4 153 41.8
Sopen10g029870 Solanum pennellii HOM05D008149 ORTHO05D010130 6.0e-15 86.3 155 40.0
PGSC0003DMG400008179 Solanum tuberosum HOM05D008149 ORTHO05D010130 5.1e-14 83.2 124 47.6
Solyc10g079220.2 Solanum lycopersicum HOM05D008149 ORTHO05D010130 1.1e-13 82.0 151 39.7
Sopen10g022760 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-13 82.0 151 39.7
Peaxi162Scf00245g01014 Petunia axillaris HOM05D017006 ORTHO05D010130 1.5e-13 81.6 228 29.8
Peaxi162Scf00108g00028 Petunia axillaris HOM05D008149 ORTHO05D010130 1.9e-13 81.3 270 31.1
PGSC0003DMG400008147 Solanum tuberosum HOM05D008149 ORTHO05D010130 1.9e-13 81.3 153 40.5
Peaxi162Scf01327g00121 Petunia axillaris HOM05D003646 ORTHO05D004503 1.3e-12 78.6 202 30.7
Peaxi162Scf00692g00052 Petunia axillaris HOM05D010426 ORTHO05D003796 1.6e-12 78.2 202 31.2
COL.COLO4_18802 Corchorus olitorius HOM05D002630 ORTHO05D000952 3.7e-12 77.0 141 34.0
PGSC0003DMG400047167 Solanum tuberosum HOM05D008050 ORTHO05D003796 9.0e-11 72.4 158 29.7
Peaxi162Scf00027g00162 Petunia axillaris HOM05D010426 ORTHO05D003796 2.0e-10 71.2 149 33.6
Peaxi162Scf00111g00145 Petunia axillaris HOM05D008050 ORTHO05D003796 2.0e-10 71.2 151 34.4
Actinidia18621 Actinidia chinensis HOM05D007636 ORTHO05D000952 3.4e-10 70.5 147 34.0
CAN.G641.11 Capsicum annuum HOM05D008149 ORTHO05D010130 3.4e-10 70.5 217 30.4
Nitab4.5_0003386g0050 Nicotiana tabacum HOM05D008050 ORTHO05D003796 3.4e-10 70.5 159 30.2
PGSC0003DMG400007065 Solanum tuberosum HOM05D008050 ORTHO05D003796 3.4e-10 70.5 129 32.6
Actinidia31546 Actinidia chinensis HOM05D002630 ORTHO05D000952 5.8e-10 69.7 180 30.6
Actinidia18619 Actinidia chinensis HOM05D002630 ORTHO05D000952 1.7e-09 68.2 147 33.3
Solyc03g062670.1 Solanum lycopersicum HOM05D008050 ORTHO05D003796 6.5e-09 66.2 189 27.5
Nitab4.5_0001745g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 8.4e-09 65.9 159 28.3
CAN.G375.39 Capsicum annuum HOM05D007636 ORTHO05D003796 1.1e-08 65.5 131 34.4
Nitab4.5_0000499g0070 Nicotiana tabacum HOM05D008050 ORTHO05D003796 1.1e-08 65.5 177 27.7
Sopen03g014990 Solanum pennellii HOM05D008050 ORTHO05D003796 1.1e-08 65.5 189 27.5
PGSC0003DMG400046943 Solanum tuberosum HOM05D008050 ORTHO05D003796 1.1e-08 65.5 182 28.0
Nitab4.5_0007586g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 1.4e-08 65.1 159 28.9
Nitab4.5_0015616g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 1.4e-08 65.1 159 28.3
Nitab4.5_0001670g0030 Nicotiana tabacum HOM05D008050 ORTHO05D003796 1.9e-08 64.7 159 28.3
Peaxi162Scf00009g00021 Petunia axillaris HOM05D009491 ORTHO05D003796 1.9e-08 64.7 155 29.7
Actinidia00474 Actinidia chinensis HOM05D007636 ORTHO05D000952 3.2e-08 63.9 153 31.4
Nitab4.5_0008183g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 4.2e-08 63.5 159 29.6
Peaxi162Scf00245g00118 Petunia axillaris HOM05D008149 ORTHO05D010130 4.2e-08 63.5 107 43.0
Nitab4.5_0010159g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 9.3e-08 62.4 136 30.1
Nitab4.5_0000008g0630 Nicotiana tabacum HOM05D010426 ORTHO05D003796 2.1e-07 61.2 182 27.5
Nitab4.5_0025925g0010 Nicotiana tabacum HOM05D010426 ORTHO05D003796 2.7e-07 60.8 150 30.0
Thecc.05G051100 Theobroma cacao HOM05D000010 ORTHO05D000952 2.7e-07 60.8 132 36.4
CAN.G641.9 Capsicum annuum HOM05D008149 ORTHO05D010130 3.5e-07 60.5 83 42.2
Peaxi162Scf00245g01210 Petunia axillaris HOM05D017006 ORTHO05D010130 4.6e-07 60.1 159 30.8
Nitab4.5_0002471g0020 Nicotiana tabacum HOM05D008050 ORTHO05D003796 7.9e-07 59.3 191 26.2
FAN25G2891 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.0e-06 58.9 163 31.3
PGSC0003DMG400038867 Solanum tuberosum HOM05D009491 ORTHO05D003796 1.3e-06 58.5 152 28.3
FvH4_3g18930 Fragaria vesca HOM05D002630 ORTHO05D000952 1.8e-06 58.2 147 30.6
FAN07G2769 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.8e-06 58.2 190 27.9
FAN11G3152 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.8e-06 58.2 147 30.6
FAN11G3586 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.8e-06 58.2 163 31.3
FAN21G1107 Fragaria x ananassa HOM05D002630 ORTHO05D000952 2.3e-06 57.8 162 30.2
FAN21G0085 Fragaria x ananassa HOM05D002630 ORTHO05D000952 3.9e-06 57.0 139 33.1
Peaxi162Scf00017g00243 Petunia axillaris HOM05D008050 ORTHO05D003796 5.1e-06 56.6 181 27.1
PGSC0003DMG400023887 Solanum tuberosum HOM05D008149 ORTHO05D010130 6.7e-06 56.2 198 33.3


User provided reference genes

Program Settings