Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g012530 Solanum pennellii HOM05D003888 ORTHO05D007163 4.1e-117 424.9 232 100.0
Solyc02g038809.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.5e-50 203.0 160 70.0
Sopen06g011310 Solanum pennellii HOM05D003888 ORTHO05D007163 8.1e-49 198.0 306 44.4
PGSC0003DMG400010915 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.9e-48 194.9 111 90.1
PGSC0003DMG400038980 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.9e-37 160.2 146 55.5
CAN.G1172.11 Capsicum annuum HOM05D003888 ORTHO05D007163 1.6e-36 157.1 148 55.4
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.1e-36 156.8 154 55.8
Sopen10g017940 Solanum pennellii HOM05D003888 ORTHO05D007163 3.0e-35 152.9 91 87.9
PGSC0003DMG400047283 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.4e-32 143.3 135 54.1
CAN.G380.8 Capsicum annuum HOM05D003888 ORTHO05D007163 1.2e-31 141.0 136 53.7
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 2.0e-31 140.2 120 61.7
PGSC0003DMG400045139 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.0e-30 137.9 181 44.8
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-30 137.5 161 46.0
PGSC0003DMG400042993 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.4e-29 134.0 102 63.7
PGSC0003DMG400034519 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.2e-29 132.9 124 53.2
Sopen07g014660 Solanum pennellii HOM05D003888 ORTHO05D007163 1.6e-28 130.6 100 60.0
CAN.G171.3 Capsicum annuum HOM05D003888 ORTHO05D007163 7.9e-28 128.3 133 52.6
Solyc10g052640.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 7.9e-28 128.3 122 54.9
Solyc10g017750.2 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.1e-26 124.4 206 44.2
PGSC0003DMG400039058 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-24 117.9 98 59.2
CAN.G634.4 Capsicum annuum HOM05D003888 ORTHO05D007163 1.5e-23 114.0 98 59.2
Sopen12g014930 Solanum pennellii HOM05D003888 ORTHO05D007163 1.5e-23 114.0 138 44.9
PGSC0003DMG400032589 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.0e-23 113.6 115 48.7
Solyc07g026860.4 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.4e-23 112.8 84 61.9
Solyc12g035290.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.4e-23 112.8 118 50.0
PGSC0003DMG400034991 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-22 110.9 79 67.1
PGSC0003DMG400043596 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-20 104.4 111 49.5
Solyc05g025770.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.6e-20 104.0 108 50.0
PGSC0003DMG400009654 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.1e-20 103.6 77 59.7
Sopen12g012320 Solanum pennellii HOM05D003888 ORTHO05D007163 4.6e-20 102.4 83 62.7
PGSC0003DMG400041412 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.6e-20 102.4 102 52.9
PGSC0003DMG400037695 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.1e-20 102.1 113 47.8
Solyc07g021500.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 7.9e-20 101.7 111 49.5
Solyc10g052840.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.0e-19 101.3 76 61.8
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.4e-19 100.9 98 53.1
PGSC0003DMG400041034 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.8e-19 100.5 107 46.7
PGSC0003DMG400035178 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.3e-19 100.1 111 46.8
PGSC0003DMG400045356 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.9e-19 99.4 113 46.9
EL10Ac1g02206 Beta vulgaris HOM05D000107 ORTHO05D000062 8.8e-19 98.2 143 37.8
PGSC0003DMG400047292 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.8e-19 98.2 92 54.3
CAN.G563.1 Capsicum annuum HOM05D003888 ORTHO05D007163 1.9e-18 97.1 98 55.1
Solyc07g017907.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.5e-18 96.7 107 48.6
PGSC0003DMG400005532 Solanum tuberosum HOM05D000021 ORTHO05D007163 2.5e-18 96.7 60 75.0
PGSC0003DMG400042112 Solanum tuberosum HOM05D000107 ORTHO05D000062 2.5e-18 96.7 113 47.8
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.3e-18 95.9 113 47.8
CAN.G59.26 Capsicum annuum HOM05D003888 ORTHO05D007163 5.7e-18 95.5 93 57.0
PGSC0003DMG400036776 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.7e-17 94.0 118 44.1
CAN.G133.3 Capsicum annuum HOM05D003888 ORTHO05D007163 2.8e-17 93.2 93 52.7
PGSC0003DMG400044443 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.8e-17 93.2 99 47.5
CAN.G472.23 Capsicum annuum HOM05D003888 ORTHO05D007163 3.7e-17 92.8 69 66.7
AUR62024779 Chenopodium quinoa HOM05D003888 ORTHO05D007163 3.7e-17 92.8 144 38.2
PGSC0003DMG400036468 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.2e-17 91.7 161 39.8
Solyc11g032040.3 Solanum lycopersicum HOM05D000107 ORTHO05D000062 1.8e-16 90.5 159 36.5
PGSC0003DMG400003494 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.8e-16 90.5 133 37.6
CAN.G176.21 Capsicum annuum HOM05D003888 ORTHO05D007163 2.4e-16 90.1 98 52.0
Solyc10g052870.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.4e-16 90.1 99 48.5
Sopen11g016570 Solanum pennellii HOM05D003888 ORTHO05D007163 4.1e-16 89.4 73 57.5
PGSC0003DMG400005234 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.3e-16 89.0 83 50.6
AUR62022285 Chenopodium quinoa HOM05D003888 ORTHO05D007163 5.9e-15 85.5 115 38.3
PGSC0003DMG400017141 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.9e-15 85.5 76 53.9
PGSC0003DMG400035776 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.0e-14 84.7 62 61.3
Hund03533 Selenicereus undatus HOM05D009146 ORTHO05D011649 2.2e-14 83.6 118 39.8
Solyc07g017903.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.2e-14 83.6 83 49.4
CAN.G647.20 Capsicum annuum HOM05D003888 ORTHO05D007163 2.9e-14 83.2 88 48.9
Solyc07g039250.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.9e-14 83.2 48 75.0
PGSC0003DMG400036303 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.8e-14 82.8 62 59.7
SalBow6G6573 Salvia bowleyana HOM05D003888 ORTHO05D007163 5.0e-14 82.4 101 41.6
Sc08g0006140 Simmondsia chinensis HOM05D010546 ORTHO05D013352 5.0e-14 82.4 123 37.4
PGSC0003DMG400019003 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.0e-14 82.4 99 47.5
Nitab4.5_0012229g0010 Nicotiana tabacum HOM05D003888 ORTHO05D007163 1.4e-13 80.9 110 40.0
Hund12964 Selenicereus undatus HOM05D009146 ORTHO05D011649 1.4e-13 80.9 108 40.7
CAN.G1055.6 Capsicum annuum HOM05D003888 ORTHO05D007163 1.9e-13 80.5 61 60.7
SalBow5G3729 Salvia bowleyana HOM05D004072 ORTHO05D007163 2.5e-13 80.1 101 40.6
PGSC0003DMG400019004 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.2e-13 79.7 107 43.9
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.2e-13 79.7 66 54.5
PGSC0003DMG400044731 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.2e-13 79.3 62 58.1
PGSC0003DMG400037215 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.2e-13 78.6 61 57.4
Solyc10g052810.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 9.4e-13 78.2 55 65.5
PGSC0003DMG400044246 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.4e-13 78.2 135 40.0
Sc17g0003010 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.2e-12 77.8 158 32.3
PGSC0003DMG400034794 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-12 77.8 103 43.7
EL10Ac4g08946 Beta vulgaris HOM05D000107 ORTHO05D007163 1.6e-12 77.4 131 32.1
EL10Ac9g20905 Beta vulgaris HOM05D003888 ORTHO05D007163 2.1e-12 77.0 130 32.3
Nitab4.5_0000013g0370 Nicotiana tabacum HOM05D003888 ORTHO05D007163 3.6e-12 76.3 62 59.7
Solyc03g065230.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.7e-12 75.9 76 48.7
EL10Ac6g13912 Beta vulgaris HOM05D000107 ORTHO05D000062 6.1e-12 75.5 130 32.3
AUR62029973 Chenopodium quinoa HOM05D003888 ORTHO05D007163 6.1e-12 75.5 117 35.9
PGSC0003DMG400037028 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.9e-12 75.1 56 58.9
EL10Ac8g19343 Beta vulgaris HOM05D000107 ORTHO05D007163 1.4e-11 74.3 130 31.5
Peaxi162Scf00033g00005 Petunia axillaris HOM05D003888 ORTHO05D007163 1.4e-11 74.3 99 40.4
EL10Ac9g20933 Beta vulgaris HOM05D000107 ORTHO05D007163 2.3e-11 73.6 132 33.3
PGSC0003DMG400013128 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.9e-11 72.8 96 45.8
EL10Ac3g06998 Beta vulgaris HOM05D000107 ORTHO05D000062 1.1e-10 71.2 130 30.8
Peaxi162Scf00158g00046 Petunia axillaris HOM05D003888 ORTHO05D007163 1.1e-10 71.2 78 46.2
Sc07g0004880 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.1e-10 71.2 108 36.1
EL10Ac9g20782 Beta vulgaris HOM05D010317 ORTHO05D007163 2.0e-10 70.5 144 31.9
EL10Ac9g22369 Beta vulgaris HOM05D000107 ORTHO05D000062 9.7e-10 68.2 108 36.1
Sc07g0005550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 9.7e-10 68.2 136 32.4
PGSC0003DMG400009784 Solanum tuberosum HOM05D003888 ORTHO05D051315 1.7e-09 67.4 51 60.8
EL10Ac9g20800 Beta vulgaris HOM05D003888 ORTHO05D007163 2.8e-09 66.6 114 33.3
EL10Ac2g03390 Beta vulgaris HOM05D003888 ORTHO05D007163 3.7e-09 66.2 83 39.8
EL10Ac8g19540 Beta vulgaris HOM05D000107 ORTHO05D000062 1.1e-08 64.7 80 42.5
Sc19g0006150 Simmondsia chinensis HOM05D010546 ORTHO05D013352 3.1e-08 63.2 83 38.6
Sc01g0006440 Simmondsia chinensis HOM05D010546 ORTHO05D013352 5.3e-08 62.4 104 36.5
EL10Ac1g02033 Beta vulgaris HOM05D003888 ORTHO05D007163 7.0e-08 62.0 76 40.8
EL10Ac5g11043 Beta vulgaris HOM05D000107 ORTHO05D007163 7.0e-08 62.0 78 41.0
AUR62032094 Chenopodium quinoa HOM05D000107 ORTHO05D011649 1.5e-07 60.8 50 56.0
EL10Ac2g03235 Beta vulgaris HOM05D000107 ORTHO05D000062 2.6e-07 60.1 146 30.1
Sc02g0004550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 2.6e-07 60.1 86 38.4
PGSC0003DMG400037082 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.6e-07 60.1 84 42.9
EL10Ac8g19587 Beta vulgaris HOM05D003888 ORTHO05D007163 4.5e-07 59.3 105 30.5
Sc03g0005860 Simmondsia chinensis HOM05D010546 ORTHO05D013352 5.9e-07 58.9 103 35.0
EL10Ac4g09268 Beta vulgaris HOM05D000107 ORTHO05D000062 1.3e-06 57.8 96 34.4
EL10Ac5g11837 Beta vulgaris HOM05D000107 ORTHO05D000062 1.3e-06 57.8 66 42.4
PGSC0003DMG400035226 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-06 57.8 94 37.2
Sc17g0002940 Simmondsia chinensis HOM05D010546 ORTHO05D013352 2.9e-06 56.6 86 38.4
EL10Ac3g06448 Beta vulgaris HOM05D003888 ORTHO05D007163 3.8e-06 56.2 104 35.6
EL10Ac4g09128 Beta vulgaris HOM05D000107 ORTHO05D000062 3.8e-06 56.2 63 42.9
EL10Ac6g13838 Beta vulgaris HOM05D003888 ORTHO05D007163 3.8e-06 56.2 95 31.6
EL10Ac6g14230 Beta vulgaris HOM05D000107 ORTHO05D000062 3.8e-06 56.2 63 42.9
EL10Ac4g09043 Beta vulgaris HOM05D003888 ORTHO05D007163 5.0e-06 55.8 96 31.2
EL10Ac9g22721 Beta vulgaris HOM05D000107 ORTHO05D000062 5.0e-06 55.8 66 40.9
Sc22g0004340 Simmondsia chinensis HOM05D010546 ORTHO05D013352 6.5e-06 55.5 86 34.9
EL10Ac7g16364 Beta vulgaris HOM05D000107 ORTHO05D000062 8.5e-06 55.1 95 31.6
EL10Ac7g17511 Beta vulgaris HOM05D000107 ORTHO05D000062 8.5e-06 55.1 95 31.6
Hund00757 Selenicereus undatus HOM05D009146 ORTHO05D011649 8.5e-06 55.1 69 43.5


User provided reference genes

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