Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g010650 Solanum pennellii HOM05D003886 ORTHO05D004587 6.8e-254 880.2 447 100.0
Solyc02g032300.3 Solanum lycopersicum HOM05D003886 ORTHO05D004587 5.8e-253 877.1 447 99.8
Peaxi162Scf00198g01528 Petunia axillaris HOM05D003886 ORTHO05D004587 1.1e-216 756.5 455 85.7
Peaxi162Scf00048g01418 Petunia axillaris HOM05D003886 ORTHO05D004587 3.7e-199 698.4 441 81.0
Nitab4.5_0006794g0050 Nicotiana tabacum HOM05D003886 ORTHO05D004587 3.4e-197 691.8 441 81.0
CAN.G809.69 Capsicum annuum HOM05D003886 ORTHO05D004587 1.7e-196 689.5 441 80.0
Nitab4.5_0013482g0010 Nicotiana tabacum HOM05D003886 ORTHO05D004587 1.9e-195 686.0 441 80.0
Sopen02g026260 Solanum pennellii HOM05D003886 ORTHO05D004587 7.2e-195 684.1 441 79.6
PGSC0003DMG400017734 Solanum tuberosum HOM05D003886 ORTHO05D004587 2.7e-194 682.2 441 79.8
Solyc02g081650.3 Solanum lycopersicum HOM05D003886 ORTHO05D004587 6.7e-193 677.6 441 78.5
Dinv30973 Davidia involucrata HOM05D003886 ORTHO05D004587 4.7e-186 654.8 445 76.6
Dinv24535 Davidia involucrata HOM05D003886 ORTHO05D004587 4.4e-184 648.3 442 75.6
GSVIVG01000280001 Vitis vinifera HOM05D003886 ORTHO05D004587 6.3e-183 644.4 439 75.4
Migut.N00997 Erythranthe guttata HOM05D003886 ORTHO05D004587 7.0e-182 641.0 444 75.2
QL05p085089 Quercus lobata HOM05D003886 ORTHO05D004587 1.2e-178 630.2 451 72.1
CSS0041623 Camellia sinensis var. sinensis HOM05D003886 ORTHO05D004587 1.0e-177 627.1 447 72.3
Cc02_g36820 Coffea canephora HOM05D003886 ORTHO05D004587 1.0e-177 627.1 439 75.6
Thecc.06G049000 Theobroma cacao HOM05D003886 ORTHO05D004587 1.8e-177 626.3 444 73.6
Actinidia17720 Actinidia chinensis HOM05D003886 ORTHO05D004587 5.2e-177 624.8 442 74.0
Rhsim11G0111800 Rhododendron simsii HOM05D003886 ORTHO05D004587 5.2e-177 624.8 441 73.9
MSTRG.27896 Avicennia marina HOM05D003886 ORTHO05D004587 2.0e-176 622.9 443 74.0
Oeu000173.4 Olea europaea HOM05D003886 ORTHO05D004587 4.8e-175 618.2 523 64.1
Prupe.3G028400 Prunus persica HOM05D003886 ORTHO05D004587 4.8e-175 618.2 451 71.4
CiPaw.01G092000 Carya illinoinensis HOM05D003886 ORTHO05D004587 8.3e-175 617.5 443 71.1
CSS0008969 Camellia sinensis var. sinensis HOM05D003886 ORTHO05D004587 1.4e-174 616.7 443 71.3
Gohir.D10G001000 Gossypium hirsutum HOM05D003886 ORTHO05D004587 1.2e-173 613.6 443 72.2
Gorai.011G001300 Gossypium raimondii HOM05D003886 ORTHO05D004587 1.2e-173 613.6 443 72.2
ECA234G0089 Erigeron canadensis HOM05D003886 ORTHO05D004587 1.6e-173 613.2 442 70.6
MD09G1170200 Malus domestica HOM05D003886 ORTHO05D004587 3.5e-173 612.1 445 69.9
Actinidia11710 Actinidia chinensis HOM05D003886 ORTHO05D004587 4.5e-173 611.7 428 75.5
Cfa002157 Carpinus fangiana HOM05D003886 ORTHO05D004587 5.9e-173 611.3 445 71.9
MD17G1156900 Malus domestica HOM05D003886 ORTHO05D004587 2.3e-172 609.4 445 69.4
TWI75G0340 Tripterygium wilfordii HOM05D003886 ORTHO05D004587 3.8e-172 608.6 444 69.8
Gohir.A10G000800 Gossypium hirsutum HOM05D003886 ORTHO05D004587 8.6e-172 607.4 443 71.8
HanXRQChr17g0570801 Helianthus annuus HOM05D003886 ORTHO05D004587 8.6e-172 607.4 443 70.7
HanXRQChr17g0545561 Helianthus annuus HOM05D003886 ORTHO05D004587 4.2e-171 605.1 447 70.7
Nn7g35782 Nelumbo nucifera HOM05D003886 ORTHO05D004587 3.6e-170 602.1 435 69.7
vmacro01641 Vaccinium macrocarpon HOM05D003886 ORTHO05D004587 3.6e-170 602.1 477 67.5
Oeu010600.1 Olea europaea HOM05D003886 ORTHO05D004587 6.1e-170 601.3 443 71.3
THA.LOC104808112 Tarenaya hassleriana HOM05D003886 ORTHO05D004587 8.0e-170 600.9 447 69.6
Duzib235G0758 Durio zibethinus HOM05D003886 ORTHO05D004587 1.4e-169 600.1 443 70.9
TWI12G0365 Tripterygium wilfordii HOM05D003886 ORTHO05D004587 2.3e-169 599.4 442 69.0
Manes.15G112100 Manihot esculenta HOM05D003886 ORTHO05D004587 1.2e-168 597.0 444 69.8
MSTRG.5179 Avicennia marina HOM05D003886 ORTHO05D004587 5.7e-168 594.7 429 73.4
FAN09G1502 Fragaria x ananassa HOM05D003886 ORTHO05D004587 6.3e-167 591.3 442 69.5
Aa31LG4G1970 Aethionema arabicum HOM05D003886 ORTHO05D004587 4.1e-166 588.6 452 67.7
FAN05G1128 Fragaria x ananassa HOM05D003886 ORTHO05D004587 7.0e-166 587.8 442 69.2
Manes.03G095300 Manihot esculenta HOM05D003886 ORTHO05D004587 7.0e-166 587.8 443 68.8
Atru.chr3.1841 Acer truncatum HOM05D003886 ORTHO05D004587 1.2e-165 587.0 456 67.8
VMungo0464G1314 Vigna mungo HOM05D003886 ORTHO05D004587 2.7e-165 585.9 442 68.1
Phvul.004G065600 Phaseolus vulgaris HOM05D003886 ORTHO05D004587 7.8e-165 584.3 443 67.7
Lj2g0000910 Lotus japonicus HOM05D003886 ORTHO05D004587 1.3e-164 583.6 441 68.3
FAN14G2559 Fragaria x ananassa HOM05D003886 ORTHO05D004587 1.7e-164 583.2 442 69.0
AUR62011474 Chenopodium quinoa HOM05D003886 ORTHO05D004587 5.0e-164 581.6 452 68.4
AUR62016582 Chenopodium quinoa HOM05D003886 ORTHO05D004587 6.6e-164 581.3 445 68.8
FAN14G1097 Fragaria x ananassa HOM05D003886 ORTHO05D004587 1.1e-163 580.5 442 68.8
FvH4_6g36310 Fragaria vesca HOM05D003886 ORTHO05D004587 1.5e-163 580.1 442 68.8
RcHm_v2.0_Chr2g0148321 Rosa chinensis HOM05D003886 ORTHO05D004587 1.5e-163 580.1 445 68.3
TAR626G1553 Trochodendron aralioides HOM05D003886 ORTHO05D004587 1.9e-163 579.7 437 69.1
Sp5g34070 Schrenkiella parvula HOM05D003886 ORTHO05D004587 5.6e-163 578.2 444 66.7
EL10Ac9g21865 Beta vulgaris HOM05D003886 ORTHO05D004587 7.3e-163 577.8 445 67.6
TAR624G0406 Trochodendron aralioides HOM05D003886 ORTHO05D004587 1.2e-162 577.0 436 69.0
DCAR_022329 Daucus carota HOM05D003886 ORTHO05D004587 2.1e-162 576.2 447 68.2
Glyma.19G049500 Glycine max HOM05D003886 ORTHO05D004587 2.1e-162 576.2 443 68.2
Ca_17750_v3 Cicer arietinum L. HOM05D003886 ORTHO05D004587 3.6e-162 575.5 443 66.6
CsaV3_1G038140 Cucumis sativus L. HOM05D003886 ORTHO05D004587 1.0e-161 573.9 445 66.1
MELO3C015232.2 Cucumis melo HOM05D003886 ORTHO05D004587 4.0e-161 572.0 445 65.6
Thhalv10018536m.g Eutrema salsugineum HOM05D003886 ORTHO05D004587 6.8e-161 571.2 454 66.3
Ah.01g020350 Amaranthus hybridus HOM05D003886 ORTHO05D004587 2.6e-160 569.3 448 65.8
Oeu061917.1 Olea europaea HOM05D003886 ORTHO05D004587 3.4e-160 568.9 513 60.6
Eucgr.F04066 Eucalyptus grandis HOM05D003886 ORTHO05D004587 7.5e-160 567.8 447 64.9
BolC6t40307H Brassica oleracea HOM05D003886 ORTHO05D004587 9.8e-160 567.4 445 65.8
Glyma.13G045600 Glycine max HOM05D003886 ORTHO05D004587 9.8e-160 567.4 443 66.8
Sabra14G0003200 Salix brachista HOM05D003886 ORTHO05D004587 1.3e-159 567.0 465 65.8
BcaC08g47466 Brassica carinata HOM05D003886 ORTHO05D004587 1.7e-159 566.6 445 65.8
CANSAT01G1565 Cannabis sativa HOM05D003886 ORTHO05D004587 2.2e-159 566.2 454 65.0
COL.COLO4_26802 Corchorus olitorius HOM05D003886 ORTHO05D004587 2.9e-159 565.8 443 67.7
Lalb_Chr21g0317801 Lupinus albus HOM05D003886 ORTHO05D004587 2.9e-159 565.8 442 66.5
Potri.014G000600 Populus trichocarpa HOM05D003886 ORTHO05D004587 1.1e-158 563.9 468 66.0
Ciclev10020009m.g Citrus clementina HOM05D003886 ORTHO05D004587 1.9e-158 563.1 455 67.3
Carub.0002s2589 Capsella rubella HOM05D003886 ORTHO05D004587 3.2e-158 562.4 444 65.5
Carub.0001s1642 Capsella rubella HOM05D003886 ORTHO05D004587 4.1e-158 562.0 445 67.6
C06p52890 Brassica napus HOM05D003886 ORTHO05D004587 9.2e-158 560.8 446 65.7
Duzib192G0492 Durio zibethinus HOM05D003886 ORTHO05D004587 9.2e-158 560.8 443 67.9
A07p44160 Brassica napus HOM05D003886 ORTHO05D004587 1.2e-157 560.5 445 65.2
BraA07t31924Z Brassica rapa HOM05D003886 ORTHO05D004587 1.6e-157 560.1 445 65.2
PGR102G2920 Punica granatum HOM05D003886 ORTHO05D004587 1.6e-157 560.1 455 66.8
Thhalv10007658m.g Eutrema salsugineum HOM05D003886 ORTHO05D004587 3.5e-157 558.9 445 67.0
Sed0016198 Sechium edule HOM05D003886 ORTHO05D004587 6.0e-157 558.1 438 66.9
BcaC08g45391 Brassica carinata HOM05D003886 ORTHO05D004587 1.3e-156 557.0 449 64.1
Sc24g0001760 Simmondsia chinensis HOM05D003886 ORTHO05D004587 1.3e-156 557.0 441 65.8
C06p30220 Brassica napus HOM05D003886 ORTHO05D004587 1.7e-156 556.6 449 63.9
BolC6t38185H Brassica oleracea HOM05D003886 ORTHO05D004587 1.7e-156 556.6 449 63.9
BcaB02g07192 Brassica carinata HOM05D003886 ORTHO05D004587 1.9e-155 553.1 445 64.5
AL2G39480 Arabidopsis lyrata HOM05D003886 ORTHO05D004587 1.6e-154 550.1 446 63.9
AT1G79020 Arabidopsis thaliana HOM05D003886 ORTHO05D004587 2.1e-154 549.7 444 64.4
BraA07t30377Z Brassica rapa HOM05D003886 ORTHO05D004587 2.8e-154 549.3 451 64.1
Lalb_Chr06g0174541 Lupinus albus HOM05D003886 ORTHO05D004587 4.7e-154 548.5 442 65.8
Psat7g057280 Pisum sativum HOM05D003886 ORTHO05D004587 4.7e-154 548.5 444 65.5
AL1G28850 Arabidopsis lyrata HOM05D003886 ORTHO05D004587 6.2e-154 548.1 447 66.9
Medtr8g090035 Medicago truncatula HOM05D003886 ORTHO05D004587 6.2e-154 548.1 443 65.0
AT1G16690 Arabidopsis thaliana HOM05D003886 ORTHO05D004587 2.3e-153 546.2 447 66.2
Lalb_Chr04g0257491 Lupinus albus HOM05D003886 ORTHO05D004587 3.1e-153 545.8 441 63.5
unitig_699.g19834 Utricularia gibba HOM05D003886 ORTHO05D004587 2.0e-152 543.1 439 66.1
PSO782G4625 Papaver somniferum HOM05D003886 ORTHO05D004587 7.5e-152 541.2 438 65.8
BcaC03g15859 Brassica carinata HOM05D003886 ORTHO05D004587 2.2e-151 539.7 450 64.4
A02p22460 Brassica napus HOM05D003886 ORTHO05D004587 3.7e-151 538.9 448 64.7
PSO063G1610 Papaver somniferum HOM05D003886 ORTHO05D004587 1.1e-150 537.3 438 65.1
C02p36140 Brassica napus HOM05D003886 ORTHO05D004587 1.9e-150 536.6 450 64.2
BraA02t07251Z Brassica rapa HOM05D003886 ORTHO05D004587 9.2e-150 534.3 447 64.4
A07p27360 Brassica napus HOM05D003886 ORTHO05D004587 1.2e-149 533.9 449 63.3
CARHR017150 Cardamine hirsuta HOM05D003886 ORTHO05D004587 1.6e-149 533.5 448 63.4
Lj5C312G11 Lonicera japonica HOM05D003886 ORTHO05D004587 1.6e-149 533.5 421 67.5
Lsat_1_v5_gn_3_52161 Lactuca sativa HOM05D003886 ORTHO05D004587 2.1e-149 533.1 402 69.7
arahy.Tifrunner.gnm1.ann1.Z0Z3SY Arachis hypogaea HOM05D003886 ORTHO05D004587 2.7e-149 532.7 476 60.1
HPP92_015734 Vanilla planifolia HOM05D003886 ORTHO05D004587 4.6e-149 531.9 440 63.9
MBI14_g11787_MAGBIO Magnolia biondii HOM05D003886 ORTHO05D004587 7.8e-149 531.2 410 67.3
TPR.G6290 Trifolium pratense HOM05D003886 ORTHO05D004587 1.6e-146 523.5 420 66.4
Os08g0338900 Oryza sativa ssp. japonica HOM05D003886 ORTHO05D004587 1.5e-144 516.9 445 61.1
Zm00001eb308950 Zea mays HOM05D003886 ORTHO05D004587 3.4e-144 515.8 451 61.2
ATR0626G209 Amborella trichopoda HOM05D003886 ORTHO05D004587 9.9e-144 514.2 430 64.0
Sp1g14830 Schrenkiella parvula HOM05D003886 ORTHO05D004587 8.3e-143 511.1 445 62.0
CDE02G1355 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 2.3e-140 503.1 428 61.0
CDE03G0037 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 2.4e-137 493.0 434 60.4
Aqoxy6G00358 Aquilegia oxysepala HOM05D003886 ORTHO05D004587 5.4e-134 481.9 444 59.7
ECA246G0124 Erigeron canadensis HOM05D003886 ORTHO05D004587 1.0e-132 477.6 401 64.8
SGA_v2.0_scaffold8G04472 Striga asiatica HOM05D003886 ORTHO05D004587 9.0e-129 464.5 502 56.2
SHI31130 Sapria himalayana HOM05D003886 ORTHO05D004587 5.8e-128 461.8 458 57.6
Nitab4.5_0000389g0130 Nicotiana tabacum HOM05D003886 ORTHO05D004587 2.2e-127 459.9 276 85.5
CDE05G0598 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 1.1e-123 447.6 431 55.2
CDE06G2124 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 2.2e-119 433.3 387 58.4
BolC2t09627H Brassica oleracea HOM05D003886 ORTHO05D004587 2.4e-113 413.3 338 64.5
arahy.Tifrunner.gnm1.ann1.78GTJP Arachis hypogaea HOM05D003886 ORTHO05D004587 1.2e-112 411.0 288 72.9
AagrBONN_evm.TU.Sc2ySwM_228.1694 Anthoceros agrestis HOM05D003886 ORTHO05D004587 9.9e-112 407.9 453 52.5
Ciclev10021199m.g Citrus clementina HOM05D003886 ORTHO05D004587 2.2e-111 406.8 303 71.0
Mapoly0014s0003 Marchantia polymorpha HOM05D003886 ORTHO05D004587 8.4e-111 404.8 469 49.0
SMO367G1242 Selaginella moellendorffii HOM05D003886 ORTHO05D004587 2.5e-102 376.7 451 48.1
CAN.G1586.1 Capsicum annuum HOM05D003886 ORTHO05D004587 7.9e-101 371.7 236 83.1
Pp3c23_7050 Physcomitrium patens HOM05D003886 ORTHO05D004587 7.9e-101 371.7 464 48.1
PGSC0003DMG400013092 Solanum tuberosum HOM05D003886 ORTHO05D004587 1.8e-100 370.5 191 98.4
ECA228G0002 Erigeron canadensis HOM05D003886 ORTHO05D004587 9.4e-94 348.2 317 60.3
ATR0751G140 Amborella trichopoda HOM05D003886 ORTHO05D004587 5.0e-87 325.9 337 55.5
Pp3c16_8390 Physcomitrium patens HOM05D003886 ORTHO05D004587 6.7e-76 288.9 473 41.4
Cpa.g.sc10.20 Carica papaya HOM05D003886 ORTHO05D004587 3.3e-75 286.6 193 73.1
Os09g0284600 Oryza sativa ssp. japonica HOM05D003886 ORTHO05D004587 5.3e-73 279.3 216 65.3
CBR_g38268 Chara braunii HOM05D003886 ORTHO05D004587 1.3e-71 274.6 296 52.4
CARHR072690 Cardamine hirsuta HOM05D003886 ORTHO05D004587 4.7e-69 266.2 193 67.9
ClCG03G018020 Citrullus lanatus HOM05D003886 ORTHO05D004587 8.8e-68 261.9 280 52.9
Nn8g38501 Nelumbo nucifera HOM05D003886 ORTHO05D004587 3.4e-67 260.0 187 69.5
Nitab4.5_0000389g0110 Nicotiana tabacum HOM05D003886 ORTHO05D004587 1.7e-66 257.7 169 77.5
HanXRQChr08g0234351 Helianthus annuus HOM05D003886 ORTHO05D004587 1.1e-62 245.0 157 79.6
Ah.14g084510 Amaranthus hybridus HOM05D003886 ORTHO05D004587 8.3e-58 228.8 450 38.9
Cpa.g.sc10.19 Carica papaya HOM05D003886 ORTHO05D004587 3.3e-54 216.9 186 64.0
BcaB05g25167 Brassica carinata HOM05D003886 ORTHO05D004587 5.2e-52 209.5 126 81.0
Haze_16249 Corylus avellana HOM05D003886 ORTHO05D004587 4.4e-51 206.5 249 50.2
Zm00001eb097400 Zea mays HOM05D003886 ORTHO05D004587 9.8e-51 205.3 206 53.4
ClCG03G018040 Citrullus lanatus HOM05D003886 ORTHO05D004587 2.3e-44 184.1 129 72.1
Cre03.g196400 Chlamydomonas reinhardtii HOM05D003886 ORTHO05D004587 6.8e-44 182.6 477 32.1
SEGI_11104 Sequoiadendron giganteum HOM05D003886 ORTHO05D004587 1.5e-43 181.4 269 42.4
SEGI_16863 Sequoiadendron giganteum HOM05D003886 ORTHO05D004587 7.5e-43 179.1 169 52.1
ATR0751G177 Amborella trichopoda HOM05D003886 ORTHO05D004587 2.4e-41 174.1 135 63.7
MCO08G116 Micromonas commoda HOM05D003886 ORTHO05D004587 2.4e-41 174.1 357 36.1
PRCOL_00004606 Prasinoderma coloniale HOM05D003886 ORTHO05D004587 2.3e-36 157.5 289 35.3
Aqoxy6G02601 Aquilegia oxysepala HOM05D003886 ORTHO05D004587 1.8e-28 131.3 154 50.6
Haze_16250 Corylus avellana HOM05D003886 ORTHO05D004587 1.7e-26 124.8 79 75.9
GSVIVG01024509001 Vitis vinifera HOM05D003886 ORTHO05D004587 4.9e-26 123.2 79 82.3
MBI11_g15900_MAGBIO Magnolia biondii HOM05D003886 ORTHO05D004587 6.4e-26 122.9 87 70.1
arahy.Tifrunner.gnm1.ann1.6KK5MR Arachis hypogaea HOM05D003886 ORTHO05D004587 1.2e-21 108.6 127 51.2
arahy.Tifrunner.gnm1.ann1.RANL81 Arachis hypogaea HOM05D003886 ORTHO05D004587 8.1e-21 105.9 156 44.2
arahy.Tifrunner.gnm1.ann1.K7FQ1R Arachis hypogaea HOM05D003886 ORTHO05D019782 5.2e-20 103.2 126 50.0
arahy.Tifrunner.gnm1.ann1.F9GSXH Arachis hypogaea HOM05D003886 ORTHO05D019782 2.1e-16 91.3 129 42.6
CAN.G1600.1 Capsicum annuum HOM05D003886 ORTHO05D004587 1.0e-15 89.0 51 86.3
Lj5C312T17 Lonicera japonica HOM05D001538 ORTHO05D004587 2.1e-13 81.3 108 48.1
BcaB05g25166 Brassica carinata HOM05D000912 ORTHO05D001232 1.1e-12 79.0 74 59.5
SHI49864 Sapria himalayana HOM05D003886 ORTHO05D004587 2.2e-10 71.2 51 68.6
Lsat_1_v5_gn_7_81560 Lactuca sativa HOM05D000267 ORTHO05D029881 8.4e-10 69.3 76 53.9
SHI26090 Sapria himalayana HOM05D005069 ORTHO05D006024 2.4e-09 67.8 63 52.4
Gohir.A07G077000 Gossypium hirsutum HOM05D003886 ORTHO05D004587 9.3e-09 65.9 52 73.1
ClCG03G018030 Citrullus lanatus HOM05D003886 ORTHO05D004587 3.0e-07 60.8 42 66.7
Dinv30975 Davidia involucrata HOM05D000190 ORTHO05D000113 6.6e-07 59.7 125 42.4
Pp3c11_12130 Physcomitrium patens HOM05D002054 ORTHO05D004936 1.9e-06 58.2 162 32.1
Lsat_1_v5_gn_6_25880 Lactuca sativa HOM05D000267 ORTHO05D029881 3.3e-06 57.4 35 74.3
SHI44505 Sapria himalayana HOM05D003886 ORTHO05D009901 5.6e-06 56.6 36 66.7


User provided reference genes

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