Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g010540 Solanum pennellii HOM05D008571 ORTHO05D011280 6.9e-81 303.9 153 100.0
Sopen05g024280 Solanum pennellii HOM05D008571 ORTHO05D011280 5.5e-70 267.7 152 88.8
PGSC0003DMG400040582 Solanum tuberosum HOM05D008571 ORTHO05D011280 7.2e-62 240.7 155 79.4
PGSC0003DMG400021964 Solanum tuberosum HOM05D008571 ORTHO05D011280 8.8e-60 233.8 158 77.8
PGSC0003DMG400024370 Solanum tuberosum HOM05D008571 ORTHO05D011280 3.3e-59 231.9 154 79.2
Sopen12g010550 Solanum pennellii HOM05D008571 ORTHO05D011280 2.5e-54 215.7 155 72.3
Sopen08g023430 Solanum pennellii HOM05D008571 ORTHO05D011280 1.5e-30 136.7 115 66.1
Sopen08g023440 Solanum pennellii HOM05D003027 ORTHO05D011280 4.0e-28 128.6 96 76.0
BolC8t49584H Brassica oleracea HOM05D000002 ORTHO05D004433 2.2e-26 122.9 142 47.9
Sopen05g008270 Solanum pennellii HOM05D000006 ORTHO05D000695 4.9e-26 121.7 87 73.6
Cc04_g10140 Coffea canephora HOM05D000002 ORTHO05D004433 1.4e-25 120.2 144 46.5
Sopen12g020480 Solanum pennellii HOM05D000002 ORTHO05D000001 4.1e-25 118.6 83 74.7
RcHm_v2.0_Chr3g0481931 Rosa chinensis HOM05D000002 ORTHO05D000001 2.7e-24 115.9 166 39.8
TAR009G0003 Trochodendron aralioides HOM05D008571 ORTHO05D004433 2.7e-24 115.9 159 42.8
Sopen09g011970 Solanum pennellii HOM05D008571 ORTHO05D011280 3.0e-23 112.5 72 77.8
FvH4_5g31431 Fragaria vesca HOM05D000002 ORTHO05D004433 5.6e-22 108.2 165 38.8
Oeu006707.1 Olea europaea HOM05D000002 ORTHO05D004433 3.1e-20 102.4 142 40.8
Nn1g02545 Nelumbo nucifera HOM05D000002 ORTHO05D004433 9.8e-19 97.4 140 40.7
ECA233G2071 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-18 97.1 169 37.9
Sopen01g024850 Solanum pennellii HOM05D008571 ORTHO05D011280 1.3e-18 97.1 83 63.9
SHI06746 Sapria himalayana HOM05D000002 ORTHO05D004433 4.9e-18 95.1 171 37.4
ECA238G3349 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.4e-18 94.7 152 38.2
SHI16256 Sapria himalayana HOM05D000002 ORTHO05D004433 8.3e-18 94.4 143 37.8
SHI27796 Sapria himalayana HOM05D000002 ORTHO05D000001 8.3e-18 94.4 146 37.7
SHI47859 Sapria himalayana HOM05D000002 ORTHO05D004433 1.1e-17 94.0 144 39.6
Nn1g07613 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.9e-17 93.2 170 37.6
SHI49936 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-17 92.8 146 37.7
SHI07649 Sapria himalayana HOM05D000002 ORTHO05D004433 3.2e-17 92.4 146 37.7
SHI18424 Sapria himalayana HOM05D000002 ORTHO05D004433 3.2e-17 92.4 146 37.0
ECA233G1874 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.1e-17 92.0 154 37.7
SHI10488 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-17 92.0 146 37.0
SHI14609 Sapria himalayana HOM05D000002 ORTHO05D000001 5.4e-17 91.7 168 36.9
SHI18328 Sapria himalayana HOM05D000002 ORTHO05D000001 5.4e-17 91.7 146 37.7
SHI02070 Sapria himalayana HOM05D000002 ORTHO05D000001 7.1e-17 91.3 147 39.5
SHI32918 Sapria himalayana HOM05D000002 ORTHO05D000001 7.1e-17 91.3 143 37.1
SHI39436 Sapria himalayana HOM05D000002 ORTHO05D000001 7.1e-17 91.3 136 38.2
SHI39438 Sapria himalayana HOM05D000002 ORTHO05D000001 7.1e-17 91.3 136 38.2
ECA234G1536 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.2e-17 90.9 154 37.7
SHI03937 Sapria himalayana HOM05D000002 ORTHO05D004433 9.2e-17 90.9 143 37.1
ECA238G4301 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.5e-16 89.0 151 35.1
SHI18394 Sapria himalayana HOM05D000002 ORTHO05D004433 3.5e-16 89.0 152 38.2
SHI10030 Sapria himalayana HOM05D000002 ORTHO05D000001 4.6e-16 88.6 146 36.3
ECA246G3093 Erigeron canadensis HOM05D001467 ORTHO05D001214 7.8e-16 87.8 151 35.1
Nn4g23986 Nelumbo nucifera HOM05D000002 ORTHO05D000001 7.8e-16 87.8 161 34.8
SHI45609 Sapria himalayana HOM05D000002 ORTHO05D000001 7.8e-16 87.8 146 36.3
PGSC0003DMG400038206 Solanum tuberosum HOM05D008571 ORTHO05D011280 1.0e-15 87.4 76 63.2
CAN.G1829.1 Capsicum annuum HOM05D000583 ORTHO05D004433 1.3e-15 87.0 141 41.1
ECA236G5067 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-15 86.7 157 38.2
ECA234G3041 Erigeron canadensis HOM05D001549 ORTHO05D003098 2.3e-15 86.3 158 37.3
SHI38827 Sapria himalayana HOM05D000002 ORTHO05D004433 3.0e-15 85.9 139 40.3
SHI51732 Sapria himalayana HOM05D000002 ORTHO05D000001 8.6e-15 84.3 146 35.6
ECA247G3536 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-14 84.0 152 38.8
Nn1g09492 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.5e-14 82.8 192 32.8
MD01G1096700 Malus domestica HOM05D000002 ORTHO05D000001 3.3e-14 82.4 168 35.1
ECA246G0537 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-14 82.0 178 34.8
Sopen05g027370 Solanum pennellii HOM05D000002 ORTHO05D004433 7.3e-14 81.3 154 35.7
PGSC0003DMG400001585 Solanum tuberosum HOM05D000002 ORTHO05D004433 7.3e-14 81.3 143 34.3
Oeu026048.1 Olea europaea HOM05D000002 ORTHO05D000001 2.1e-13 79.7 166 33.7
SHI21269 Sapria himalayana HOM05D000002 ORTHO05D004433 6.2e-13 78.2 93 45.2
ECA240G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.1e-13 77.8 177 36.7
SHI04823 Sapria himalayana HOM05D000002 ORTHO05D004433 2.3e-12 76.3 93 45.2
SHI45690 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-12 76.3 131 38.2
SHI47495 Sapria himalayana HOM05D000002 ORTHO05D000001 3.1e-12 75.9 131 38.2
SHI04168 Sapria himalayana HOM05D000002 ORTHO05D004433 4.0e-12 75.5 84 47.6
ECA248G0669 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.9e-12 74.3 135 35.6
SHI03641 Sapria himalayana HOM05D000002 ORTHO05D004433 8.9e-12 74.3 131 37.4
SHI43061 Sapria himalayana HOM05D000002 ORTHO05D004433 2.0e-11 73.2 93 43.0
Ah.13g077590 Amaranthus hybridus HOM05D000002 ORTHO05D000001 2.6e-11 72.8 160 32.5
Sopen02g016810 Solanum pennellii HOM05D008571 ORTHO05D004433 3.4e-11 72.4 44 77.3
ECA240G4274 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.4e-11 72.0 134 38.1
Nn3g20325 Nelumbo nucifera HOM05D008571 ORTHO05D004433 4.4e-11 72.0 113 39.8
Sopen10g024020 Solanum pennellii HOM05D008571 ORTHO05D011280 2.2e-10 69.7 47 72.3
SHI18909 Sapria himalayana HOM05D000002 ORTHO05D004433 3.8e-10 68.9 63 52.4
ECA240G1708 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.9e-10 68.6 162 30.9
Nn8g40511 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.4e-10 68.2 127 37.0
Oeu030662.1 Olea europaea HOM05D000002 ORTHO05D004433 6.4e-10 68.2 142 32.4
Sopen04g021490 Solanum pennellii HOM05D008571 ORTHO05D011280 8.4e-10 67.8 83 50.6
CAN.G587.30 Capsicum annuum HOM05D000015 ORTHO05D001173 1.1e-09 67.4 52 65.4
ECA232G4651 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-09 67.0 69 52.2
Nn8g40101 Nelumbo nucifera HOM05D000002 ORTHO05D004433 5.4e-09 65.1 113 36.3
Ah.16g106890 Amaranthus hybridus HOM05D000002 ORTHO05D004433 7.1e-09 64.7 75 48.0
Sopen09g013990 Solanum pennellii HOM05D008648 ORTHO05D010855 7.1e-09 64.7 41 80.5
CSS0020823 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.2e-09 64.3 92 40.2
ECA233G2319 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-08 63.9 70 44.3
SHI44323 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-08 63.9 76 47.4
ECA233G2777 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-08 63.5 85 42.4
ECA248G0687 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-08 63.5 136 35.3
ECA248G3794 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.7e-08 62.8 107 39.3
Ah.13g069620 Amaranthus hybridus HOM05D000002 ORTHO05D004433 3.5e-08 62.4 91 41.8
Thhalv10000559m.g Eutrema salsugineum HOM05D008571 ORTHO05D004433 3.5e-08 62.4 40 65.0
Oeu034487.1 Olea europaea HOM05D000002 ORTHO05D004433 3.5e-08 62.4 59 44.1
Ah.01g008310 Amaranthus hybridus HOM05D000002 ORTHO05D004433 4.6e-08 62.0 123 35.8
ECA233G2147 Erigeron canadensis HOM05D000509 ORTHO05D004433 4.6e-08 62.0 95 38.9
PGSC0003DMG400034324 Solanum tuberosum HOM05D000002 ORTHO05D004433 4.6e-08 62.0 111 33.3
TAR610G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 4.6e-08 62.0 140 33.6
SHI00405 Sapria himalayana HOM05D000002 ORTHO05D000001 6.0e-08 61.6 110 35.5
SHI43075 Sapria himalayana HOM05D000002 ORTHO05D000001 6.0e-08 61.6 110 35.5
ECA234G3440 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.8e-08 61.2 140 34.3
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.8e-08 61.2 88 38.6
Nn8g39416 Nelumbo nucifera HOM05D000002 ORTHO05D000001 7.8e-08 61.2 104 37.5
CSS0036927 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 1.0e-07 60.8 123 34.1
Nn2g15606 Nelumbo nucifera HOM05D000006 ORTHO05D004433 5.1e-07 58.5 81 37.0
Sopen05g014170 Solanum pennellii HOM05D000004 ORTHO05D000002 6.6e-07 58.2 36 72.2
Sp1g30660 Schrenkiella parvula HOM05D008571 ORTHO05D004433 8.6e-07 57.8 113 33.6
PSO675G3339 Papaver somniferum HOM05D000002 ORTHO05D004433 1.1e-06 57.4 55 43.6
CSS0021348 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 1.9e-06 56.6 158 31.6
ECA238G4719 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.5e-06 56.2 75 40.0
Nn1g03238 Nelumbo nucifera HOM05D000002 ORTHO05D000001 9.6e-06 54.3 58 46.6


User provided reference genes

Program Settings