Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g010350 Solanum pennellii HOM05D003617 ORTHO05D010478 8.6e-63 243.4 119 100.0
PGSC0003DMG400012065 Solanum tuberosum HOM05D003617 ORTHO05D010478 2.3e-39 165.6 112 75.0
PGSC0003DMG400042344 Solanum tuberosum HOM05D000995 ORTHO05D010478 1.1e-38 163.3 112 71.4
PGSC0003DMG400044879 Solanum tuberosum HOM05D000995 ORTHO05D001773 5.6e-38 161.0 110 72.7
Sopen05g021300 Solanum pennellii HOM05D000995 ORTHO05D012246 3.7e-37 158.3 112 71.4
PGSC0003DMG400045242 Solanum tuberosum HOM05D003617 ORTHO05D010478 5.3e-36 154.5 112 67.9
PGSC0003DMG400042314 Solanum tuberosum HOM05D003617 ORTHO05D007165 7.6e-35 150.6 113 66.4
PGSC0003DMG400039284 Solanum tuberosum HOM05D003617 ORTHO05D010478 1.4e-33 146.4 112 69.6
Sopen11g010720 Solanum pennellii HOM05D003617 ORTHO05D007165 1.1e-30 136.7 112 63.4
Sopen05g012010 Solanum pennellii HOM05D000002 ORTHO05D010478 7.4e-30 134.0 112 60.7
PGSC0003DMG400044625 Solanum tuberosum HOM05D003617 ORTHO05D010478 2.8e-29 132.1 112 60.7
Sopen12g026610 Solanum pennellii HOM05D003617 ORTHO05D010478 1.1e-28 130.2 110 62.7
PGSC0003DMG400046252 Solanum tuberosum HOM05D000995 ORTHO05D010478 9.0e-28 127.1 112 61.6
PGSC0003DMG400043386 Solanum tuberosum HOM05D003617 ORTHO05D010478 5.8e-27 124.4 89 70.8
CAN.G1445.3 Capsicum annuum HOM05D003617 ORTHO05D010478 5.0e-26 121.3 110 56.4
CAN.G275.8 Capsicum annuum HOM05D003617 ORTHO05D010478 7.2e-25 117.5 109 57.8
CAN.G67.13 Capsicum annuum HOM05D003617 ORTHO05D010478 6.1e-24 114.4 110 55.5
Sopen01g028500 Solanum pennellii HOM05D003617 ORTHO05D000001 5.1e-23 111.3 87 64.4
PGSC0003DMG400023003 Solanum tuberosum HOM05D000995 ORTHO05D000638 5.1e-23 111.3 84 67.9
CAN.G908.5 Capsicum annuum HOM05D003617 ORTHO05D010478 6.7e-23 110.9 110 54.5
CAN.G1658.3 Capsicum annuum HOM05D003617 ORTHO05D010478 1.1e-22 110.2 110 55.5
PGSC0003DMG400040544 Solanum tuberosum HOM05D003617 ORTHO05D007165 2.5e-22 109.0 74 73.0
CAN.G1329.39 Capsicum annuum HOM05D003617 ORTHO05D010478 3.3e-22 108.6 107 55.1
CAN.G735.4 Capsicum annuum HOM05D003617 ORTHO05D010478 5.7e-22 107.8 110 55.5
PGSC0003DMG400044334 Solanum tuberosum HOM05D003617 ORTHO05D010478 7.4e-22 107.5 110 48.2
CAN.G626.1 Capsicum annuum HOM05D003617 ORTHO05D010478 9.7e-22 107.1 112 50.9
CAN.G626.3 Capsicum annuum HOM05D003617 ORTHO05D010478 1.3e-21 106.7 87 63.2
CAN.G108.23 Capsicum annuum HOM05D003617 ORTHO05D010478 6.3e-21 104.4 107 53.3
Nitab4.5_0000423g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.4e-20 103.2 114 50.9
Nitab4.5_0005533g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.8e-20 102.8 108 51.9
CAN.G135.3 Capsicum annuum HOM05D003617 ORTHO05D010478 2.4e-20 102.4 100 52.0
Nitab4.5_0000109g0010 Nicotiana tabacum HOM05D000995 ORTHO05D010478 1.5e-19 99.8 114 50.0
CAN.G1323.7 Capsicum annuum HOM05D003617 ORTHO05D010478 4.5e-19 98.2 87 60.9
Nitab4.5_0002555g0010 Nicotiana tabacum HOM05D003617 ORTHO05D010478 4.5e-19 98.2 117 49.6
PGSC0003DMG400007485 Solanum tuberosum HOM05D000995 ORTHO05D001773 5.9e-19 97.8 76 65.8
Nitab4.5_0001586g0180 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.0e-18 97.1 96 54.2
Nitab4.5_0000300g0220 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.9e-18 95.5 87 57.5
Nitab4.5_0000836g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.0e-18 94.7 87 57.5
Nitab4.5_0017311g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.5e-18 94.4 95 54.7
Nitab4.5_0024231g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.1e-17 93.6 117 47.9
Nitab4.5_0003882g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.2e-17 92.0 96 52.1
Peaxi162Scf00466g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 4.2e-17 91.7 111 45.9
Nitab4.5_0003317g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 9.4e-17 90.5 88 54.5
Nitab4.5_0001101g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.2e-16 90.1 114 44.7
Sopen06g006570 Solanum pennellii HOM05D000995 ORTHO05D002620 1.2e-16 90.1 105 48.6
Nitab4.5_0005492g0060 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.6e-16 89.7 87 55.2
Nitab4.5_0001995g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.7e-16 89.0 109 46.8
Nitab4.5_0022539g0010 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.6e-16 88.6 88 54.5
Nitab4.5_0004315g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.0e-15 87.0 108 49.1
Nitab4.5_0001081g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.3e-15 85.9 85 52.9
Nitab4.5_0022539g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.3e-15 85.9 95 52.6
CAN.G587.67 Capsicum annuum HOM05D003617 ORTHO05D010478 3.9e-15 85.1 76 55.3
Nitab4.5_0006184g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.1e-14 83.6 116 44.0
Sopen07g020760 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-14 82.8 65 66.2
Nitab4.5_0011017g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.3e-14 81.6 109 43.1
Nitab4.5_0003317g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 7.4e-14 80.9 92 51.1
Nitab4.5_0002671g0080 Nicotiana tabacum HOM05D003617 ORTHO05D010478 9.7e-14 80.5 96 49.0
Nitab4.5_0008204g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.7e-13 78.6 88 50.0
Nitab4.5_0004188g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.3e-13 77.8 87 47.1
CAN.G34.10 Capsicum annuum HOM05D003617 ORTHO05D010478 1.4e-12 76.6 108 39.8
Nitab4.5_0005517g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.1e-12 75.5 62 58.1
Nitab4.5_0000095g0090 Nicotiana tabacum HOM05D003617 ORTHO05D010478 5.3e-12 74.7 87 49.4
Nitab4.5_0000419g0120 Nicotiana tabacum HOM05D003617 ORTHO05D010478 6.9e-12 74.3 84 50.0
Nitab4.5_0000481g0030 Nicotiana tabacum HOM05D003617 ORTHO05D010478 6.9e-12 74.3 99 41.4
Nitab4.5_0004914g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.5e-11 73.2 96 46.9
PGSC0003DMG400035791 Solanum tuberosum HOM05D000995 ORTHO05D000638 2.0e-11 72.8 52 67.3
Nitab4.5_0000263g0210 Nicotiana tabacum HOM05D003617 ORTHO05D010478 4.5e-11 71.6 84 48.8
Nitab4.5_0000048g0120 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.9e-10 68.9 96 42.7
Peaxi162Scf00883g00081 Petunia axillaris HOM05D003617 ORTHO05D007165 5.0e-10 68.2 97 38.1
Peaxi162Scf00991g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 1.4e-09 66.6 61 52.5
Nitab4.5_0000004g0300 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.9e-09 66.2 72 47.2
Nitab4.5_0003674g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.5e-09 65.9 88 40.9
Nitab4.5_0002397g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.4e-09 63.9 69 47.8
CAN.G108.56 Capsicum annuum HOM05D003617 ORTHO05D010478 1.2e-08 63.5 100 37.0
Peaxi162Scf00148g00142 Petunia axillaris HOM05D003617 ORTHO05D007165 2.7e-08 62.4 61 50.8
CAN.G370.37 Capsicum annuum HOM05D003617 ORTHO05D010478 6.1e-08 61.2 101 36.6
Peaxi162Scf00104g00615 Petunia axillaris HOM05D003617 ORTHO05D007165 1.4e-07 60.1 68 44.1
CAN.G1362.2 Capsicum annuum HOM05D003617 ORTHO05D010478 1.8e-07 59.7 78 43.6
Sopen07g015010 Solanum pennellii HOM05D000004 ORTHO05D000034 1.8e-07 59.7 110 36.4
CAN.G68.7 Capsicum annuum HOM05D003617 ORTHO05D010478 2.3e-07 59.3 82 41.5
Nitab4.5_0001939g0070 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.3e-07 59.3 63 46.0
CAN.G41.3 Capsicum annuum HOM05D003617 ORTHO05D010478 3.0e-07 58.9 106 36.8
Peaxi162Scf00963g00001 Petunia axillaris HOM05D003617 ORTHO05D007165 5.1e-07 58.2 68 44.1
PGSC0003DMG400039936 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.5e-06 56.6 45 55.6
Nitab4.5_0000045g0140 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.6e-06 55.8 84 44.0
Nitab4.5_0000078g0230 Nicotiana tabacum HOM05D003617 ORTHO05D010478 5.7e-06 54.7 90 42.2


User provided reference genes

Program Settings