Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g009160 Solanum pennellii HOM05D007631 ORTHO05D009566 7.8e-126 453.8 220 100.0
Solyc02g055440.4 Solanum lycopersicum HOM05D007631 ORTHO05D009566 4.3e-124 448.0 220 98.6
PGSC0003DMG400029978 Solanum tuberosum HOM05D007631 ORTHO05D009566 2.0e-113 412.5 220 91.8
CAN.G157.15 Capsicum annuum HOM05D007631 ORTHO05D009566 2.7e-86 322.4 236 69.9
Nitab4.5_0002392g0040 Nicotiana tabacum HOM05D007631 ORTHO05D009566 7.2e-71 271.2 228 63.6
SalBow6G3201 Salvia bowleyana HOM05D007631 ORTHO05D009566 2.4e-66 256.1 225 57.8
Cc11_g05090 Coffea canephora HOM05D007631 ORTHO05D009566 2.9e-64 249.2 205 62.0
Potri.005G094700 Populus trichocarpa HOM05D007631 ORTHO05D009566 6.5e-64 248.1 203 61.6
Duzib268G1119 Durio zibethinus HOM05D007631 ORTHO05D009566 3.2e-63 245.7 192 61.5
ECA246G0740 Erigeron canadensis HOM05D007631 ORTHO05D009566 3.6e-62 242.3 189 61.4
TWI53G1419 Tripterygium wilfordii HOM05D007631 ORTHO05D009566 6.1e-62 241.5 199 60.8
CiPaw.09G164100 Carya illinoinensis HOM05D007631 ORTHO05D009566 5.1e-61 238.4 204 58.3
Gohir.A03G110300 Gossypium hirsutum HOM05D007631 ORTHO05D009566 6.7e-61 238.0 181 61.9
Gohir.D02G134900 Gossypium hirsutum HOM05D007631 ORTHO05D009566 8.8e-61 237.7 181 61.9
Lsat_1_v5_gn_3_33601 Lactuca sativa HOM05D007631 ORTHO05D009566 1.1e-60 237.3 185 61.6
AUR62015208 Chenopodium quinoa HOM05D007631 ORTHO05D009566 2.8e-59 232.6 195 56.9
Hma1.2p1_0499F.1_g166830 Hydrangea macrophylla HOM05D007631 ORTHO05D009566 3.7e-59 232.3 217 55.3
Eucgr.J00853 Eucalyptus grandis HOM05D007631 ORTHO05D009566 1.4e-58 230.3 187 61.0
Manes.04G066700 Manihot esculenta HOM05D007631 ORTHO05D009566 3.1e-58 229.2 200 58.0
PSO478G5292 Papaver somniferum HOM05D007631 ORTHO05D009566 9.1e-58 227.6 182 59.3
Nn4g24939 Nelumbo nucifera HOM05D007631 ORTHO05D009566 2.6e-57 226.1 233 52.4
EL10Ac9g22926 Beta vulgaris HOM05D007631 ORTHO05D009566 3.4e-57 225.7 194 55.2
PGR119G1778 Punica granatum HOM05D007631 ORTHO05D009566 5.9e-57 224.9 194 56.2
CsaV3_3G031500 Cucumis sativus L. HOM05D007631 ORTHO05D009566 1.0e-56 224.2 214 53.3
FAN12G2650 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.7e-56 223.4 206 54.4
Ciclev10032529m.g Citrus clementina HOM05D007631 ORTHO05D009566 8.5e-56 221.1 192 55.2
HanXRQChr17g0540801 Helianthus annuus HOM05D007631 ORTHO05D009566 1.9e-55 219.9 197 56.9
unitig_699.g19551 Utricularia gibba HOM05D007631 ORTHO05D009566 1.9e-55 219.9 225 52.0
GSVIVG01010153001 Vitis vinifera HOM05D007631 ORTHO05D009566 5.5e-55 218.4 193 59.6
Lalb_Chr03g0024841 Lupinus albus HOM05D007631 ORTHO05D009566 7.2e-55 218.0 187 56.1
ClCG10G011860 Citrullus lanatus HOM05D007631 ORTHO05D009566 9.4e-55 217.6 217 51.6
Aa31LG8G6570 Aethionema arabicum HOM05D007631 ORTHO05D009566 1.2e-54 217.2 184 57.1
CsaV3_3G032520 Cucumis sativus L. HOM05D007631 ORTHO05D009566 1.2e-54 217.2 215 52.6
MD16G1250700 Malus domestica HOM05D007631 ORTHO05D009566 2.1e-54 216.5 196 55.1
MELO3C024033.2 Cucumis melo HOM05D007631 ORTHO05D009566 2.7e-54 216.1 195 55.9
Sp3g17810 Schrenkiella parvula HOM05D007631 ORTHO05D009566 3.6e-54 215.7 206 52.9
Lj3g0001232 Lotus japonicus HOM05D007631 ORTHO05D009566 1.0e-53 214.2 215 53.5
FAN07G2143 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.4e-53 213.8 215 51.6
Thhalv10021444m.g Eutrema salsugineum HOM05D007631 ORTHO05D009566 1.8e-53 213.4 198 53.0
Dinv17601 Davidia involucrata HOM05D007631 ORTHO05D009566 8.8e-53 211.1 198 56.1
AT3G19800 Arabidopsis thaliana HOM05D007631 ORTHO05D009566 1.5e-52 210.3 183 54.6
A01p34940 Brassica napus HOM05D007631 ORTHO05D009566 1.5e-52 210.3 183 55.7
BraA01t03577Z Brassica rapa HOM05D007631 ORTHO05D009566 1.5e-52 210.3 183 55.7
C01p44350 Brassica napus HOM05D007631 ORTHO05D009566 3.3e-52 209.1 185 55.7
BolC1t04400H Brassica oleracea HOM05D007631 ORTHO05D009566 3.3e-52 209.1 185 55.7
Glyma.11G102300 Glycine max HOM05D007631 ORTHO05D009566 4.4e-52 208.8 186 54.8
AL3G33250 Arabidopsis lyrata HOM05D007631 ORTHO05D009566 7.4e-52 208.0 183 54.1
PSO017G5087 Papaver somniferum HOM05D007631 ORTHO05D009566 9.7e-52 207.6 162 57.4
Carub.0003s1968 Capsella rubella HOM05D007631 ORTHO05D009566 1.7e-51 206.8 208 50.0
VMungo1127G1566 Vigna mungo HOM05D007631 ORTHO05D009566 5.3e-50 201.8 185 51.4
CANSAT64G0359 Cannabis sativa HOM05D007631 ORTHO05D009566 1.2e-49 200.7 217 47.9
CARHR095310 Cardamine hirsuta HOM05D007631 ORTHO05D009566 1.2e-49 200.7 183 54.6
Medtr4g074590 Medicago truncatula HOM05D007631 ORTHO05D009566 2.0e-49 199.9 185 53.0
Oeu033537.1 Olea europaea HOM05D007631 ORTHO05D009566 1.6e-46 190.3 140 65.7
TPR.G32328 Trifolium pratense HOM05D007631 ORTHO05D009566 6.1e-46 188.3 214 47.2
Hund24286 Selenicereus undatus HOM05D007631 ORTHO05D009566 1.0e-45 187.6 170 54.1
COL.COLO4_27670 Corchorus olitorius HOM05D007631 ORTHO05D009566 1.4e-45 187.2 183 51.4
Ca_03026_v3 Cicer arietinum L. HOM05D007631 ORTHO05D009566 3.0e-45 186.0 206 48.5
FAN17G2236 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.2e-44 184.1 169 53.8
arahy.Tifrunner.gnm1.ann1.C4PR70 Arachis hypogaea HOM05D007631 ORTHO05D009566 1.1e-42 177.6 231 43.3
Sc10g0006760 Simmondsia chinensis HOM05D007631 ORTHO05D009566 2.7e-41 172.9 160 51.9
Peaxi162Scf00363g00724 Petunia axillaris HOM05D007631 ORTHO05D009566 5.9e-41 171.8 99 82.8
HPP92_025628 Vanilla planifolia HOM05D007631 ORTHO05D009566 1.3e-40 170.6 179 46.9
SGA_v2.0_scaffold88G27232 Striga asiatica HOM05D007631 ORTHO05D009566 2.9e-40 169.5 127 60.6
vmacro10901 Vaccinium macrocarpon HOM05D007631 ORTHO05D009566 3.2e-39 166.0 233 39.5
DCAR_030399 Daucus carota HOM05D007631 ORTHO05D009566 9.4e-39 164.5 228 42.1
Phvul.011G031300 Phaseolus vulgaris HOM05D007631 ORTHO05D009566 1.4e-37 160.6 187 43.9
Haze_20362 Corylus avellana HOM05D007631 ORTHO05D009566 4.0e-37 159.1 223 42.2
Sed0008358 Sechium edule HOM05D007631 ORTHO05D009566 2.0e-36 156.8 224 43.3
Zm00001eb076870 Zea mays HOM05D007631 ORTHO05D009566 7.5e-36 154.8 180 45.6
QL03p043760 Quercus lobata HOM05D007631 ORTHO05D009566 1.3e-35 154.1 113 60.2
Os04g0525000 Oryza sativa ssp. japonica HOM05D007631 ORTHO05D009566 1.7e-35 153.7 180 43.9
Psat7g173560 Pisum sativum HOM05D007631 ORTHO05D009566 2.8e-35 152.9 194 45.9
RcHm_v2.0_Chr4g0399891 Rosa chinensis HOM05D007631 ORTHO05D009566 3.7e-35 152.5 155 50.3
FvH4_4g07430 Fragaria vesca HOM05D007631 ORTHO05D009566 4.8e-35 152.1 134 53.0
ATR0618G124 Amborella trichopoda HOM05D007631 ORTHO05D009566 1.8e-34 150.2 133 56.4
MBI06_g36505_MAGBIO Magnolia biondii HOM05D007631 ORTHO05D009566 3.1e-34 149.4 143 55.2
Cpa.g.sc63.2 Carica papaya HOM05D007631 ORTHO05D009566 1.2e-33 147.5 118 56.8
Prupe.1G077300 Prunus persica HOM05D007631 ORTHO05D009566 1.2e-33 147.5 129 52.7
CDE05G3190 Ceratophyllum demersum HOM05D005588 ORTHO05D006615 2.0e-33 146.7 154 49.4
Thecc.02G311600 Theobroma cacao HOM05D007631 ORTHO05D009566 3.5e-33 146.0 137 50.4
Gorai.005G150800 Gossypium raimondii HOM05D007631 ORTHO05D009566 1.0e-32 144.4 119 55.5
Atru.chr11.1322 Acer truncatum HOM05D007631 ORTHO05D009566 4.4e-28 129.0 114 54.4
Nitab4.5_0000139g0130 Nicotiana tabacum HOM05D007631 ORTHO05D009566 1.7e-27 127.1 232 40.5
FAN22G0357 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.2e-25 120.9 100 55.0
Aqoxy7G02010 Aquilegia oxysepala HOM05D007631 ORTHO05D009566 5.9e-25 118.6 119 47.9
Migut.E00614 Erythranthe guttata HOM05D007631 ORTHO05D009566 3.8e-24 115.9 99 55.6
Atru.BG.289.p Acer truncatum HOM05D007631 ORTHO05D009566 6.6e-24 115.2 94 56.4
Migut.E00703 Erythranthe guttata HOM05D007631 ORTHO05D009566 1.5e-23 114.0 99 54.5
Pp3c1_30620 Physcomitrium patens HOM05D007631 ORTHO05D009566 1.4e-21 107.5 212 29.2
TAR622G1133 Trochodendron aralioides HOM05D007631 ORTHO05D009566 1.3e-19 100.9 100 48.0
Cfa019889 Carpinus fangiana HOM05D007631 ORTHO05D009566 5.4e-18 95.5 81 53.1
AagrBONN_evm.TU.Sc2ySwM_228.2165 Anthoceros agrestis HOM05D007631 ORTHO05D009566 7.8e-17 91.7 201 33.3
CSS0013150 Camellia sinensis var. sinensis HOM05D007631 ORTHO05D009566 4.7e-14 82.4 57 73.7
SGA_v2.0_scaffold88G27234 Striga asiatica HOM05D007631 ORTHO05D009566 1.2e-06 57.8 82 36.6


User provided reference genes

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