Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g006750 Solanum pennellii HOM05D005932 ORTHO05D006213 3.9e-76 288.1 150 100.0
Solyc02g024010.1 Solanum lycopersicum HOM05D005932 ORTHO05D006213 2.2e-71 272.3 150 94.7
PGSC0003DMG400011812 Solanum tuberosum HOM05D005932 ORTHO05D006213 3.4e-64 248.4 150 88.0
Nitab4.5_0004734g0050 Nicotiana tabacum HOM05D005932 ORTHO05D006213 1.2e-45 186.8 157 68.2
Nitab4.5_0005178g0030 Nicotiana tabacum HOM05D005932 ORTHO05D006213 1.2e-45 186.8 156 68.6
Peaxi162Scf00395g00004 Petunia axillaris HOM05D005932 ORTHO05D006213 1.3e-39 166.8 157 63.7
Nitab4.5_0004615g0090 Nicotiana tabacum HOM05D005932 ORTHO05D006213 5.5e-22 108.2 127 52.8
Sopen02g019050 Solanum pennellii HOM05D005932 ORTHO05D006213 2.0e-16 89.7 151 44.4
MSTRG.16291 Avicennia marina HOM05D005932 ORTHO05D006213 2.9e-15 85.9 136 39.7
Migut.H01328 Erythranthe guttata HOM05D005932 ORTHO05D006213 5.0e-15 85.1 134 43.3
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 3.2e-14 82.4 156 37.8
unitig_37.g12073 Utricularia gibba HOM05D005932 ORTHO05D006213 9.3e-14 80.9 111 46.8
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.2e-13 80.5 142 38.0
PGSC0003DMG400021122 Solanum tuberosum HOM05D005932 ORTHO05D006213 1.6e-13 80.1 153 41.2
SGA_v2.0_scaffold1G00270 Striga asiatica HOM05D005932 ORTHO05D006213 2.1e-13 79.7 151 41.7
DCAR_003852 Daucus carota HOM05D005932 ORTHO05D006213 2.7e-13 79.3 123 42.3
Lj2P330T27 Lonicera japonica HOM05D005932 ORTHO05D006213 2.7e-13 79.3 115 43.5
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 2.7e-13 79.3 142 35.2
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 3.6e-13 79.0 126 38.9
MSTRG.13271 Avicennia marina HOM05D005932 ORTHO05D006213 6.1e-13 78.2 130 40.8
Migut.M01897 Erythranthe guttata HOM05D005932 ORTHO05D006213 1.0e-12 77.4 125 42.4
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.0e-12 77.4 150 38.0
Lsat_1_v5_gn_2_93200 Lactuca sativa HOM05D005932 ORTHO05D006213 1.0e-12 77.4 102 44.1
unitig_92.g28172 Utricularia gibba HOM05D005932 ORTHO05D006213 1.0e-12 77.4 104 47.1
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.4e-12 77.0 126 41.3
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 1.4e-12 77.0 119 42.9
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 3.0e-12 75.9 126 40.5
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 3.9e-12 75.5 124 39.5
C07p51350 Brassica napus HOM05D005932 ORTHO05D006213 6.7e-12 74.7 129 37.2
BraA03t14366Z Brassica rapa HOM05D005932 ORTHO05D006213 6.7e-12 74.7 128 38.3
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 1.1e-11 73.9 140 35.7
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 1.1e-11 73.9 131 38.2
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 1.9e-11 73.2 123 41.5
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 2.5e-11 72.8 121 40.5
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 3.3e-11 72.4 115 40.9
BcaNung00838 Brassica carinata HOM05D005932 ORTHO05D006213 5.7e-11 71.6 126 37.3
BcaNung00840 Brassica carinata HOM05D005932 ORTHO05D006213 5.7e-11 71.6 126 37.3
BolC7t45634H Brassica oleracea HOM05D005932 ORTHO05D006213 5.7e-11 71.6 126 37.3
FAN21G2441 Fragaria x ananassa HOM05D005932 ORTHO05D006213 5.7e-11 71.6 136 37.5
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 5.7e-11 71.6 132 37.9
MBI18_g11291_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 9.7e-11 70.9 122 38.5
Actinidia31387 Actinidia chinensis HOM05D005932 ORTHO05D006213 1.3e-10 70.5 141 36.9
SalBow8G0055 Salvia bowleyana HOM05D005932 ORTHO05D006213 1.3e-10 70.5 130 38.5
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 1.7e-10 70.1 137 38.7
FAN11G2171 Fragaria x ananassa HOM05D005932 ORTHO05D006213 1.7e-10 70.1 136 36.8
Lj1P1161T30 Lonicera japonica HOM05D005932 ORTHO05D006213 1.7e-10 70.1 107 48.6
SGA_v2.0_scaffold223G42865 Striga asiatica HOM05D005932 ORTHO05D006213 2.8e-10 69.3 111 45.9
BcaC06g30675 Brassica carinata HOM05D005932 ORTHO05D006213 3.7e-10 68.9 131 37.4
FvH4_3g10110 Fragaria vesca HOM05D005932 ORTHO05D006213 3.7e-10 68.9 137 36.5
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 3.7e-10 68.9 113 39.8
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 4.8e-10 68.6 124 40.3
A03p52900 Brassica napus HOM05D005932 ORTHO05D006213 8.2e-10 67.8 129 35.7
Rhsim02G0161400 Rhododendron simsii HOM05D005932 ORTHO05D006213 1.4e-09 67.0 114 38.6
MD10G1253000 Malus domestica HOM05D005932 ORTHO05D006213 1.8e-09 66.6 134 41.0
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 1.8e-09 66.6 126 34.1
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 4.1e-09 65.5 137 35.0
Sp7g19900 Schrenkiella parvula HOM05D005932 ORTHO05D006213 4.1e-09 65.5 134 36.6
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 5.3e-09 65.1 121 38.8
CsaV3_1G037320 Cucumis sativus L. HOM05D005932 ORTHO05D006213 1.2e-08 63.9 115 36.5
VMungo0540G1966 Vigna mungo HOM05D005932 ORTHO05D006213 3.4e-08 62.4 123 36.6
Solyc02g069910.2 Solanum lycopersicum HOM05D005932 ORTHO05D006213 4.5e-08 62.0 87 48.3
TWI15G0856 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 5.9e-08 61.6 119 34.5
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 7.7e-08 61.2 117 37.6
AL7G32200 Arabidopsis lyrata HOM05D005932 ORTHO05D006213 1.0e-07 60.8 126 34.9
CiPaw.09G141700 Carya illinoinensis HOM05D005932 ORTHO05D006213 1.0e-07 60.8 126 34.1
Sabra11G0088800 Salix brachista HOM05D005932 ORTHO05D006213 1.0e-07 60.8 127 34.6
Sed0018131 Sechium edule HOM05D005932 ORTHO05D006213 1.0e-07 60.8 102 37.3
CARHR228470 Cardamine hirsuta HOM05D005932 ORTHO05D006213 1.7e-07 60.1 137 34.3
CiPaw.10G109100 Carya illinoinensis HOM05D005932 ORTHO05D006213 1.7e-07 60.1 121 34.7
Lj4g0014090 Lotus japonicus HOM05D005932 ORTHO05D006213 2.2e-07 59.7 124 33.9
PGR083G0615 Punica granatum HOM05D005932 ORTHO05D006213 2.9e-07 59.3 130 33.8
AT4G21740 Arabidopsis thaliana HOM05D005932 ORTHO05D006213 3.8e-07 58.9 125 35.2
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 3.8e-07 58.9 128 32.0
RcHm_v2.0_Chr5g0016051 Rosa chinensis HOM05D005932 ORTHO05D006213 3.8e-07 58.9 128 34.4
MELO3C007074.2 Cucumis melo HOM05D005932 ORTHO05D006213 5.0e-07 58.5 125 33.6
Nn3g20198 Nelumbo nucifera HOM05D005932 ORTHO05D006213 5.0e-07 58.5 107 37.4
ClCG01G025150 Citrullus lanatus HOM05D005932 ORTHO05D006213 6.5e-07 58.2 113 36.3
VMungo0251G2717 Vigna mungo HOM05D005932 ORTHO05D006213 8.5e-07 57.8 111 35.1
Aa31LG6G3710 Aethionema arabicum HOM05D005932 ORTHO05D006213 1.4e-06 57.0 126 36.5
Phvul.002G246500 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 1.4e-06 57.0 118 34.7
Thhalv10026499m.g Eutrema salsugineum HOM05D005932 ORTHO05D006213 1.9e-06 56.6 129 34.1
MBI02_g25781_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 1.9e-06 56.6 124 33.9
Manes.06G068200 Manihot esculenta HOM05D005932 ORTHO05D006213 1.9e-06 56.6 138 34.1
Medtr8g088330 Medicago truncatula HOM05D005932 ORTHO05D006213 2.5e-06 56.2 128 31.2
CsaV3_6G052360 Cucumis sativus L. HOM05D005932 ORTHO05D006213 3.2e-06 55.8 105 35.2
Dinv04757 Davidia involucrata HOM05D005932 ORTHO05D006213 3.2e-06 55.8 104 41.3
Phvul.006G128300 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 3.2e-06 55.8 119 37.8
TPR.G6729 Trifolium pratense HOM05D005932 ORTHO05D006213 3.2e-06 55.8 125 31.2
Potri.001G371800 Populus trichocarpa HOM05D005932 ORTHO05D006213 4.2e-06 55.5 116 35.3
Potri.011G095000 Populus trichocarpa HOM05D005932 ORTHO05D006213 4.2e-06 55.5 148 33.1
Carub.0007s1967 Capsella rubella HOM05D005932 ORTHO05D006213 5.5e-06 55.1 135 30.4
Glyma.15G130200 Glycine max HOM05D005932 ORTHO05D006213 5.5e-06 55.1 144 31.2
AL7G31630 Arabidopsis lyrata HOM05D005932 ORTHO05D006213 7.2e-06 54.7 147 31.3
Glyma.08G124100 Glycine max HOM05D005932 ORTHO05D006213 7.2e-06 54.7 131 32.8
EL10Ac9g21553 Beta vulgaris HOM05D026734 ORTHO05D006213 9.4e-06 54.3 111 36.9
Medtr2g030220 Medicago truncatula HOM05D005932 ORTHO05D006213 9.4e-06 54.3 130 31.5


User provided reference genes

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