Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g004780 Solanum pennellii HOM05D005318 ORTHO05D006791 1.0e-159 566.6 266 100.0
Sopen02g004490 Solanum pennellii HOM05D005318 ORTHO05D006791 1.0e-156 556.6 265 98.5
Solyc02g020980.4 Solanum lycopersicum HOM05D005318 ORTHO05D006791 2.5e-155 552.0 265 97.4
Nitab4.5_0001388g0020 Nicotiana tabacum HOM05D005318 ORTHO05D006791 4.8e-146 521.2 265 92.5
Nitab4.5_0000092g0020 Nicotiana tabacum HOM05D005318 ORTHO05D006791 1.5e-144 516.2 265 91.7
Peaxi162Scf01017g00016 Petunia axillaris HOM05D005318 ORTHO05D006791 4.2e-142 508.1 265 89.4
Sc19g0007930 Simmondsia chinensis HOM05D005318 ORTHO05D006791 1.4e-134 483.0 263 83.3
QL07p013739 Quercus lobata HOM05D005318 ORTHO05D006791 5.5e-134 481.1 265 81.5
CSS0014915 Camellia sinensis var. sinensis HOM05D005318 ORTHO05D006791 3.6e-133 478.4 265 81.9
Actinidia37854 Actinidia chinensis HOM05D005318 ORTHO05D006791 6.1e-133 477.6 265 81.5
Thecc.05G118400 Theobroma cacao HOM05D005318 ORTHO05D006791 1.0e-132 476.9 262 81.3
DCAR_013530 Daucus carota HOM05D005318 ORTHO05D006791 1.8e-132 476.1 271 80.1
Atru.chr1.1378 Acer truncatum HOM05D005318 ORTHO05D006791 3.9e-132 474.9 265 80.0
COL.COLO4_33519 Corchorus olitorius HOM05D005318 ORTHO05D006791 8.8e-132 473.8 265 78.9
Manes.08G162200 Manihot esculenta HOM05D005318 ORTHO05D006791 2.0e-131 472.6 265 80.4
Potri.016G028900 Populus trichocarpa HOM05D005318 ORTHO05D006791 4.4e-131 471.5 265 80.4
MD00G1025200 Malus domestica HOM05D005318 ORTHO05D006791 9.7e-131 470.3 263 80.6
Aqoxy1G00050 Aquilegia oxysepala HOM05D005318 ORTHO05D006791 1.7e-130 469.5 265 78.5
Glyma.03G121100 Glycine max HOM05D005318 ORTHO05D006791 2.2e-130 469.2 265 81.9
Sabra16G0033000 Salix brachista HOM05D005318 ORTHO05D006791 3.7e-130 468.4 265 80.0
Gorai.010G128900 Gossypium raimondii HOM05D005318 ORTHO05D006791 4.8e-130 468.0 262 78.6
Gohir.D06G113100 Gossypium hirsutum HOM05D005318 ORTHO05D006791 1.4e-129 466.5 262 78.2
vmacro07764 Vaccinium macrocarpon HOM05D005318 ORTHO05D006791 1.4e-129 466.5 268 78.7
Cc06_g21270 Coffea canephora HOM05D005318 ORTHO05D006791 1.8e-129 466.1 265 80.4
arahy.Tifrunner.gnm1.ann1.HZCB2X Arachis hypogaea HOM05D005318 ORTHO05D006791 3.1e-129 465.3 265 80.4
arahy.Tifrunner.gnm1.ann1.PFNU0X Arachis hypogaea HOM05D005318 ORTHO05D006791 3.1e-129 465.3 265 80.4
Glyma.19G125800 Glycine max HOM05D005318 ORTHO05D006791 5.3e-129 464.5 265 80.4
Prupe.7G019400 Prunus persica HOM05D005318 ORTHO05D006791 5.3e-129 464.5 263 77.9
Phvul.001G117700 Phaseolus vulgaris HOM05D005318 ORTHO05D006791 7.0e-129 464.2 265 80.8
Lj1g0025305 Lotus japonicus HOM05D005318 ORTHO05D006791 9.1e-129 463.8 265 78.9
RhsimUnG0019600 Rhododendron simsii HOM05D005318 ORTHO05D006791 9.1e-129 463.8 264 79.2
Migut.K00161 Erythranthe guttata HOM05D005318 ORTHO05D006791 1.2e-128 463.4 265 79.6
Potri.006G031700 Populus trichocarpa HOM05D005318 ORTHO05D006791 1.2e-128 463.4 265 78.5
Gohir.A06G109000 Gossypium hirsutum HOM05D005318 ORTHO05D006791 2.0e-128 462.6 262 78.2
Sabra06G0021100 Salix brachista HOM05D005318 ORTHO05D006791 2.0e-128 462.6 265 78.9
Lsat_1_v5_gn_8_83900 Lactuca sativa HOM05D005318 ORTHO05D006791 4.5e-128 461.5 265 79.6
Medtr7g088740 Medicago truncatula HOM05D005318 ORTHO05D006791 4.5e-128 461.5 265 78.1
ECA236G3220 Erigeron canadensis HOM05D005318 ORTHO05D006791 1.0e-127 460.3 265 79.6
Psat0s698g0160 Pisum sativum HOM05D005318 ORTHO05D006791 1.7e-127 459.5 265 77.7
HanXRQChr06g0177301 Helianthus annuus HOM05D005318 ORTHO05D006791 2.2e-127 459.1 265 78.1
unitig_736.g22282 Utricularia gibba HOM05D005318 ORTHO05D006791 3.8e-127 458.4 265 78.9
CARHR135960 Cardamine hirsuta HOM05D005318 ORTHO05D006791 5.0e-127 458.0 265 77.7
Ca_08698_v3 Cicer arietinum L. HOM05D005318 ORTHO05D006791 6.5e-127 457.6 265 77.7
Thhalv10016195m.g Eutrema salsugineum HOM05D005318 ORTHO05D006791 8.5e-127 457.2 265 77.4
BraA05t19191Z Brassica rapa HOM05D005318 ORTHO05D006791 1.1e-126 456.8 265 76.6
Carub.0004s2316 Capsella rubella HOM05D005318 ORTHO05D006791 1.1e-126 456.8 265 77.7
Duzib128G1115 Durio zibethinus HOM05D005318 ORTHO05D006791 1.1e-126 456.8 262 77.9
TAR633G2118 Trochodendron aralioides HOM05D005318 ORTHO05D006791 1.1e-126 456.8 265 77.0
Hund24536 Selenicereus undatus HOM05D005318 ORTHO05D006791 3.2e-126 455.3 265 77.0
C04p02280 Brassica napus HOM05D005318 ORTHO05D006791 4.2e-126 454.9 265 76.2
BolC4t21874H Brassica oleracea HOM05D005318 ORTHO05D006791 4.2e-126 454.9 265 76.2
A05p01930 Brassica napus HOM05D005318 ORTHO05D006791 7.2e-126 454.1 265 76.2
FvH4_1g29260 Fragaria vesca HOM05D005318 ORTHO05D006791 7.2e-126 454.1 263 76.4
THA.LOC104803226 Tarenaya hassleriana HOM05D005318 ORTHO05D006791 9.4e-126 453.8 265 77.4
MBI19_g45589_MAGBIO Magnolia biondii HOM05D005318 ORTHO05D006791 2.1e-125 452.6 265 75.8
FAN23G1756 Fragaria x ananassa HOM05D005318 ORTHO05D006791 4.7e-125 451.4 263 76.0
Oeu064748.1 Olea europaea HOM05D005318 ORTHO05D006791 8.0e-125 450.7 265 77.7
Aa31LG3G1260 Aethionema arabicum HOM05D005318 ORTHO05D006791 1.4e-124 449.9 266 76.3
Ciclev10010989m.g Citrus clementina HOM05D005318 ORTHO05D006791 1.8e-124 449.5 265 76.6
Cfa019951 Carpinus fangiana HOM05D005318 ORTHO05D006791 2.3e-124 449.1 265 77.0
FAN19G2285 Fragaria x ananassa HOM05D005318 ORTHO05D006791 2.3e-124 449.1 263 76.0
Os07g0662900 Oryza sativa ssp. japonica HOM05D005318 ORTHO05D006791 2.3e-124 449.1 265 75.1
Dinv26400 Davidia involucrata HOM05D005318 ORTHO05D006791 3.0e-124 448.7 265 77.4
PGR142G3097 Punica granatum HOM05D005318 ORTHO05D006791 8.8e-124 447.2 261 77.4
Eucgr.K01679 Eucalyptus grandis HOM05D005318 ORTHO05D006791 2.0e-123 446.0 263 76.0
FAN26G2899 Fragaria x ananassa HOM05D005318 ORTHO05D006791 3.3e-123 445.3 263 75.3
CiPaw.09G051900 Carya illinoinensis HOM05D005318 ORTHO05D006791 7.5e-123 444.1 265 76.2
Lalb_Chr14g0365451 Lupinus albus HOM05D005318 ORTHO05D006791 7.5e-123 444.1 265 77.0
Lj2A411T33 Lonicera japonica HOM05D005318 ORTHO05D006791 9.7e-123 443.7 292 70.5
HPP92_014255 Vanilla planifolia HOM05D005318 ORTHO05D006791 9.7e-123 443.7 265 75.8
RcHm_v2.0_Chr3g0494731 Rosa chinensis HOM05D005318 ORTHO05D006791 1.7e-122 443.0 263 74.9
AL4G38790 Arabidopsis lyrata HOM05D005318 ORTHO05D006791 2.8e-122 442.2 265 74.7
AT2G40840 Arabidopsis thaliana HOM05D005318 ORTHO05D006791 3.7e-122 441.8 265 75.1
CANSAT64G0498 Cannabis sativa HOM05D005318 ORTHO05D006791 1.1e-121 440.3 263 75.7
CsaV3_4G029230 Cucumis sativus L. HOM05D005318 ORTHO05D006791 1.8e-121 439.5 263 74.9
Sp4g23170 Schrenkiella parvula HOM05D005318 ORTHO05D006791 1.8e-121 439.5 265 75.1
TWI74G0513 Tripterygium wilfordii HOM05D005318 ORTHO05D006791 4.1e-121 438.3 265 75.5
GSVIVG01025810001 Vitis vinifera HOM05D005318 ORTHO05D006791 2.0e-120 436.0 262 75.6
Oeu064749.1 Olea europaea HOM05D005318 ORTHO05D006791 3.5e-120 435.3 293 70.0
ATR0782G050 Amborella trichopoda HOM05D005318 ORTHO05D006791 1.3e-119 433.3 265 73.2
AUR62018414 Chenopodium quinoa HOM05D005318 ORTHO05D006791 1.1e-118 430.3 265 72.5
Ah.04g150540 Amaranthus hybridus HOM05D005318 ORTHO05D006791 4.2e-118 428.3 265 73.6
ClCG04G005890 Citrullus lanatus HOM05D005318 ORTHO05D006791 4.2e-118 428.3 248 77.4
FAN06G1462 Fragaria x ananassa HOM05D005318 ORTHO05D006791 9.4e-118 427.2 270 72.2
EL10Ac3g07301 Beta vulgaris HOM05D005318 ORTHO05D006791 2.1e-117 426.0 261 73.6
AUR62021029 Chenopodium quinoa HOM05D005318 ORTHO05D006791 2.7e-117 425.6 265 72.5
Cpa.g.sc92.60 Carica papaya HOM05D005318 ORTHO05D006791 2.3e-116 422.5 238 79.8
CDE08G1108 Ceratophyllum demersum HOM05D005318 ORTHO05D006791 2.0e-115 419.5 260 71.2
BcaC02g12738 Brassica carinata HOM05D005318 ORTHO05D006791 3.7e-114 415.2 278 70.1
CAN.G39.12 Capsicum annuum HOM05D005318 ORTHO05D006791 1.0e-111 407.1 203 94.1
PSO384G1877 Papaver somniferum HOM05D005318 ORTHO05D006791 4.0e-108 395.2 265 67.5
PSO339G3620 Papaver somniferum HOM05D005318 ORTHO05D006791 2.6e-107 392.5 265 67.2
SGA_v2.0_scaffold240G44129 Striga asiatica HOM05D005318 ORTHO05D006791 4.1e-105 385.2 271 69.7
SMO203G0025 Selaginella moellendorffii HOM05D005318 ORTHO05D006791 3.5e-104 382.1 259 63.7
FAN28G1591 Fragaria x ananassa HOM05D005318 ORTHO05D006791 7.8e-104 380.9 216 79.2
Mapoly0011s0190 Marchantia polymorpha HOM05D005318 ORTHO05D006791 5.6e-102 374.8 260 63.5
AagrBONN_evm.TU.Sc2ySwM_344.1228 Anthoceros agrestis HOM05D005318 ORTHO05D006791 2.8e-101 372.5 260 61.9
Pp3c15_25660 Physcomitrium patens HOM05D005318 ORTHO05D006791 1.0e-100 370.5 260 63.1
SMO327G0045 Selaginella moellendorffii HOM05D005318 ORTHO05D006791 2.4e-97 359.4 231 66.2
Sed0003650 Sechium edule HOM05D005318 ORTHO05D006791 9.5e-94 347.4 201 76.1
CBR_g6687 Chara braunii HOM05D005318 ORTHO05D006791 2.0e-83 313.2 250 54.4
PRCOL_00001049 Prasinoderma coloniale HOM05D005318 ORTHO05D006791 2.1e-72 276.6 255 50.2
Cre02.g095126 Chlamydomonas reinhardtii HOM05D005318 ORTHO05D006791 7.8e-72 274.6 256 50.0
MCO02G281 Micromonas commoda HOM05D005318 ORTHO05D006791 1.1e-70 270.8 261 49.0
Haze_20288 Corylus avellana HOM05D005318 ORTHO05D006791 4.3e-62 242.3 137 81.0
TPR.G23186 Trifolium pratense HOM05D005318 ORTHO05D006791 4.0e-60 235.7 141 75.9
MELO3C019135.2 Cucumis melo HOM05D005318 ORTHO05D006791 3.4e-59 232.6 135 76.3
TPR.G36183 Trifolium pratense HOM05D005318 ORTHO05D006791 5.8e-59 231.9 142 72.5
Zm00001eb197360 Zea mays HOM05D005318 ORTHO05D006791 9.6e-54 214.5 116 80.2
Oeu060769.1 Olea europaea HOM05D005318 ORTHO05D006791 5.5e-49 198.7 169 60.9
Hund19067 Selenicereus undatus HOM05D005318 ORTHO05D006791 5.5e-33 145.6 86 73.3
Zm00001eb329980 Zea mays HOM05D005318 ORTHO05D006791 4.1e-12 76.3 50 64.0
C07p47440 Brassica napus HOM05D005318 ORTHO05D032321 4.5e-11 72.8 58 63.8
BolC7t45271H Brassica oleracea HOM05D005318 ORTHO05D032321 4.5e-11 72.8 58 63.8


User provided reference genes

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